RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-208ENST00000542570 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
TOP3A-208ENST00000542570 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
TOP3A-208ENST00000542570 CEBPAP49715 358 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-208ENST00000542570 LTV1Q96GA3 475 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-208ENST00000542570 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
TOP3A-208ENST00000542570 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
TOP3A-208ENST00000542570 ARXQ96QS3 562 aa13.35□□□□□ -0.27
TOP3A-208ENST00000542570 EID1Q9Y6B2 187 aa13.34□□□□□ -0.27
TOP3A-208ENST00000542570 NUDCQ9Y266 331 aa13.33□□□□□ -0.27
TOP3A-208ENST00000542570 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
TOP3A-208ENST00000542570 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
TOP3A-208ENST00000542570 SLC26A8Q96RN1 970 aa13.33□□□□□ -0.28
TOP3A-208ENST00000542570 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-208ENST00000542570 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
TOP3A-208ENST00000542570 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
TOP3A-208ENST00000542570 CAMSAP2Q08AD1 1489 aa13.31□□□□□ -0.28
TOP3A-208ENST00000542570 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
TOP3A-208ENST00000542570 NUTM2GQ5VZR2 741 aa13.31□□□□□ -0.28
TOP3A-208ENST00000542570 SUPT6HQ7KZ85 1726 aaKnown RBP13.31□□□□□ -0.28
TOP3A-208ENST00000542570 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
TOP3A-208ENST00000542570 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
TOP3A-208ENST00000542570 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
TOP3A-208ENST00000542570 GPATCH8Q9UKJ3 1502 aaKnown RBP13.3□□□□□ -0.28
TOP3A-208ENST00000542570 RGS3P49796 1198 aa13.3□□□□□ -0.28
TOP3A-208ENST00000542570 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
TOP3A-208ENST00000542570 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
TOP3A-208ENST00000542570 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
TOP3A-208ENST00000542570 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-208ENST00000542570 PLIN1O60240 522 aa13.29□□□□□ -0.28
TOP3A-208ENST00000542570 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
TOP3A-208ENST00000542570 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
TOP3A-208ENST00000542570 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-208ENST00000542570 BCL2L13Q9BXK5 485 aa13.28□□□□□ -0.28
TOP3A-208ENST00000542570 PTPN23Q9H3S7 1636 aa13.28□□□□□ -0.28
TOP3A-208ENST00000542570 RALBP1Q15311 655 aa13.28□□□□□ -0.28
TOP3A-208ENST00000542570 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
TOP3A-208ENST00000542570 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-208ENST00000542570 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
TOP3A-208ENST00000542570 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
TOP3A-208ENST00000542570 APAF1O14727 1248 aa13.25□□□□□ -0.29
TOP3A-208ENST00000542570 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
TOP3A-208ENST00000542570 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
TOP3A-208ENST00000542570 IDI1Q13907 227 aa13.24□□□□□ -0.29
TOP3A-208ENST00000542570 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
TOP3A-208ENST00000542570 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
TOP3A-208ENST00000542570 FTSJ3Q8IY81 847 aaKnown RBP13.24□□□□□ -0.29
TOP3A-208ENST00000542570 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
TOP3A-208ENST00000542570 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
TOP3A-208ENST00000542570 WAPLQ7Z5K2 1190 aa13.22□□□□□ -0.29
TOP3A-208ENST00000542570 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
TOP3A-208ENST00000542570 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
TOP3A-208ENST00000542570 ANP32AP39687 249 aaKnown RBP13.22□□□□□ -0.29
TOP3A-208ENST00000542570 CCDC141Q6ZP82 1450 aa13.21□□□□□ -0.29
TOP3A-208ENST00000542570 AKNAQ7Z591 1439 aa13.21□□□□□ -0.29
TOP3A-208ENST00000542570 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
TOP3A-208ENST00000542570 WDR62O43379 1518 aa13.21□□□□□ -0.29
TOP3A-208ENST00000542570 EVC2Q86UK5 1308 aa13.21□□□□□ -0.29
TOP3A-208ENST00000542570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.21□□□□□ -0.29
TOP3A-208ENST00000542570 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.3
TOP3A-208ENST00000542570 ASXL2Q76L83 1435 aa13.21□□□□□ -0.3
TOP3A-208ENST00000542570 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
TOP3A-208ENST00000542570 FANCAO15360 1455 aa13.2□□□□□ -0.3
TOP3A-208ENST00000542570 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
TOP3A-208ENST00000542570 APBB1O00213 710 aa13.19□□□□□ -0.3
TOP3A-208ENST00000542570 HMOX1P09601 288 aa13.19□□□□□ -0.3
TOP3A-208ENST00000542570 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-208ENST00000542570 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
TOP3A-208ENST00000542570 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
TOP3A-208ENST00000542570 AMPHP49418 695 aa13.18□□□□□ -0.3
TOP3A-208ENST00000542570 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
TOP3A-208ENST00000542570 MAP3K1Q13233 1512 aa13.18□□□□□ -0.3
TOP3A-208ENST00000542570 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
TOP3A-208ENST00000542570 NBR1Q14596 966 aa13.18□□□□□ -0.3
TOP3A-208ENST00000542570 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
TOP3A-208ENST00000542570 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
TOP3A-208ENST00000542570 NUP160Q12769 1436 aa13.17□□□□□ -0.3
TOP3A-208ENST00000542570 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
TOP3A-208ENST00000542570 MTHFSP49914 203 aa13.16□□□□□ -0.3
TOP3A-208ENST00000542570 KIAA0556O60303 1618 aa13.16□□□□□ -0.3
TOP3A-208ENST00000542570 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
TOP3A-208ENST00000542570 ERBINQ96RT1 1412 aa13.16□□□□□ -0.3
TOP3A-208ENST00000542570 FBLN1P23142 703 aa13.16□□□□□ -0.3
TOP3A-208ENST00000542570 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
TOP3A-208ENST00000542570 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-208ENST00000542570 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
TOP3A-208ENST00000542570 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
TOP3A-208ENST00000542570 KIF14Q15058 1648 aa13.15□□□□□ -0.3
TOP3A-208ENST00000542570 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
TOP3A-208ENST00000542570 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-208ENST00000542570 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
TOP3A-208ENST00000542570 COG3Q96JB2 828 aa13.13□□□□□ -0.31
TOP3A-208ENST00000542570 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
TOP3A-208ENST00000542570 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
TOP3A-208ENST00000542570 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
TOP3A-208ENST00000542570 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
TOP3A-208ENST00000542570 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
TOP3A-208ENST00000542570 MAPKBP1O60336 1514 aa13.12□□□□□ -0.31
TOP3A-208ENST00000542570 SLC52A1Q9NWF4 448 aa13.11□□□□□ -0.31
TOP3A-208ENST00000542570 PLCH2O75038 1416 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms