RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 PTPN5P54829 565 aa11.19□□□□□ -0.62
MDM2-228ENST00000542502 EPAS1Q99814 870 aa11.19□□□□□ -0.62
MDM2-228ENST00000542502 COL9A1P20849 921 aa11.18□□□□□ -0.62
MDM2-228ENST00000542502 THSD4Q6ZMP0 1018 aa11.18□□□□□ -0.62
MDM2-228ENST00000542502 WNT2BQ93097 391 aa11.17□□□□□ -0.62
MDM2-228ENST00000542502 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
MDM2-228ENST00000542502 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
MDM2-228ENST00000542502 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
MDM2-228ENST00000542502 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
MDM2-228ENST00000542502 DDX12PQ92771 950 aa11.12□□□□□ -0.63
MDM2-228ENST00000542502 PDIA6Q15084 440 aa11.11□□□□□ -0.63
MDM2-228ENST00000542502 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
MDM2-228ENST00000542502 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
MDM2-228ENST00000542502 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
MDM2-228ENST00000542502 E2F4Q16254 413 aa11.09□□□□□ -0.63
MDM2-228ENST00000542502 LAPTM4BQ86VI4 370 aa11.09□□□□□ -0.63
MDM2-228ENST00000542502 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
MDM2-228ENST00000542502 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
MDM2-228ENST00000542502 ANKK1Q8NFD2 765 aa11.07□□□□□ -0.64
MDM2-228ENST00000542502 NBR1Q14596 966 aa11.06□□□□□ -0.64
MDM2-228ENST00000542502 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
MDM2-228ENST00000542502 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
MDM2-228ENST00000542502 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
MDM2-228ENST00000542502 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
MDM2-228ENST00000542502 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
MDM2-228ENST00000542502 MAP3K7O43318 606 aa11.03□□□□□ -0.64
MDM2-228ENST00000542502 ZFRQ96KR1 1074 aaKnown RBP11.03□□□□□ -0.64
MDM2-228ENST00000542502 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
MDM2-228ENST00000542502 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
MDM2-228ENST00000542502 BCAMP50895 628 aa11.01□□□□□ -0.65
MDM2-228ENST00000542502 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
MDM2-228ENST00000542502 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
MDM2-228ENST00000542502 NYAP1Q6ZVC0 841 aa10.97□□□□□ -0.65
MDM2-228ENST00000542502 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
MDM2-228ENST00000542502 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
MDM2-228ENST00000542502 GRXCR2A6NFK2 248 aa10.96□□□□□ -0.65
MDM2-228ENST00000542502 A0A0G2JS52 829 aa10.95□□□□□ -0.66
MDM2-228ENST00000542502 PRIM1P49642 420 aaKnown RBP10.95□□□□□ -0.66
MDM2-228ENST00000542502 RGS20O76081 388 aa10.94□□□□□ -0.66
MDM2-228ENST00000542502 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
MDM2-228ENST00000542502 WBP1LQ9NX94 342 aa10.94□□□□□ -0.66
MDM2-228ENST00000542502 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
MDM2-228ENST00000542502 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
MDM2-228ENST00000542502 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.93□□□□□ -0.66
MDM2-228ENST00000542502 PRSS12P56730 875 aa10.92□□□□□ -0.66
MDM2-228ENST00000542502 LRCH3Q96II8 777 aa10.92□□□□□ -0.66
MDM2-228ENST00000542502 OSBPP22059 807 aa10.91□□□□□ -0.66
MDM2-228ENST00000542502 TSR3Q9UJK0 312 aaKnown RBP10.9□□□□□ -0.66
MDM2-228ENST00000542502 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
MDM2-228ENST00000542502 HPS5Q9UPZ3 1129 aa10.89□□□□□ -0.67
MDM2-228ENST00000542502 SMAPO00193 183 aa10.86□□□□□ -0.67
MDM2-228ENST00000542502 CDHR5Q9HBB8 845 aa10.86□□□□□ -0.67
MDM2-228ENST00000542502 NBPF26B4DH59 902 aa10.85□□□□□ -0.67
MDM2-228ENST00000542502 TATDN2Q93075 761 aa10.85□□□□□ -0.67
MDM2-228ENST00000542502 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
MDM2-228ENST00000542502 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
MDM2-228ENST00000542502 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
MDM2-228ENST00000542502 KCNC4Q03721 635 aa10.84□□□□□ -0.67
MDM2-228ENST00000542502 PPP4CP60510 307 aa10.83□□□□□ -0.68
MDM2-228ENST00000542502 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
MDM2-228ENST00000542502 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
MDM2-228ENST00000542502 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
MDM2-228ENST00000542502 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
MDM2-228ENST00000542502 NPDC1Q9NQX5 325 aaPredicted RBP10.8□□□□□ -0.68
MDM2-228ENST00000542502 TTC13Q8NBP0 860 aa10.79□□□□□ -0.68
MDM2-228ENST00000542502 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
MDM2-228ENST00000542502 IRX2Q9BZI1 471 aaPredicted RBP10.77□□□□□ -0.69
MDM2-228ENST00000542502 HDGFP51858 240 aaKnown RBP10.76□□□□□ -0.69
MDM2-228ENST00000542502 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
MDM2-228ENST00000542502 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
MDM2-228ENST00000542502 TJAP1Q5JTD0 557 aa10.74□□□□□ -0.69
MDM2-228ENST00000542502 RNF40O75150 1001 aa10.71□□□□□ -0.69
MDM2-228ENST00000542502 MTRQ99707 1265 aa10.7□□□□□ -0.7
MDM2-228ENST00000542502 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
MDM2-228ENST00000542502 NECTIN2Q92692 538 aa10.69□□□□□ -0.7
MDM2-228ENST00000542502 EYA1Q99502 592 aa10.69□□□□□ -0.7
MDM2-228ENST00000542502 IL21Q9HBE4 155 aa10.69□□□□□ -0.7
MDM2-228ENST00000542502 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
MDM2-228ENST00000542502 APLP1P51693 650 aa10.67□□□□□ -0.7
MDM2-228ENST00000542502 PTGDRQ13258 359 aa10.67□□□□□ -0.7
MDM2-228ENST00000542502 SLF2Q8IX21 1173 aa10.67□□□□□ -0.7
MDM2-228ENST00000542502 SLC4A3P48751 1232 aa10.64□□□□□ -0.71
MDM2-228ENST00000542502 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
MDM2-228ENST00000542502 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
MDM2-228ENST00000542502 SEMA3EO15041 775 aa10.6□□□□□ -0.71
MDM2-228ENST00000542502 DNAJB2P25686 324 aa10.6□□□□□ -0.71
MDM2-228ENST00000542502 PPP1R18Q6NYC8 613 aa10.6□□□□□ -0.71
MDM2-228ENST00000542502 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
MDM2-228ENST00000542502 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
MDM2-228ENST00000542502 PRR14Q9BWN1 585 aa10.58□□□□□ -0.72
MDM2-228ENST00000542502 FCHSD2O94868 740 aa10.57□□□□□ -0.72
MDM2-228ENST00000542502 COPS2P61201 443 aa10.57□□□□□ -0.72
MDM2-228ENST00000542502 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
MDM2-228ENST00000542502 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
MDM2-228ENST00000542502 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
MDM2-228ENST00000542502 PRKD2Q9BZL6 878 aa10.56□□□□□ -0.72
MDM2-228ENST00000542502 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.56□□□□□ -0.72
MDM2-228ENST00000542502 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
MDM2-228ENST00000542502 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
MDM2-228ENST00000542502 ZPR1O75312 459 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms