RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
C2CD3-218ENST00000542484 BCL2L12Q9HB09 334 aa9.7□□□□□ -0.86
C2CD3-218ENST00000542484 CERKQ8TCT0 537 aa9.68□□□□□ -0.86
C2CD3-218ENST00000542484 SLC24A3Q9HC58 644 aa9.68□□□□□ -0.86
C2CD3-218ENST00000542484 ERBB3P21860 1342 aa9.66□□□□□ -0.86
C2CD3-218ENST00000542484 EMP3P54852 163 aa9.66□□□□□ -0.86
C2CD3-218ENST00000542484 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
C2CD3-218ENST00000542484 MINK1Q8N4C8 1332 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-218ENST00000542484 FAM163AQ96GL9 167 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-218ENST00000542484 FECHP22830 423 aa9.64□□□□□ -0.87
C2CD3-218ENST00000542484 PTPREP23469 700 aa9.64□□□□□ -0.87
C2CD3-218ENST00000542484 VARS2Q5ST30 1063 aaKnown RBP9.64□□□□□ -0.87
C2CD3-218ENST00000542484 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-218ENST00000542484 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
C2CD3-218ENST00000542484 MARVELD3Q96A59 401 aa9.64□□□□□ -0.87
C2CD3-218ENST00000542484 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
C2CD3-218ENST00000542484 PPP1R3GB7ZBB8 358 aa9.63□□□□□ -0.87
C2CD3-218ENST00000542484 AK7Q96M32 723 aa9.63□□□□□ -0.87
C2CD3-218ENST00000542484 IRF6O14896 467 aa9.62□□□□□ -0.87
C2CD3-218ENST00000542484 COL9A1P20849 921 aa9.61□□□□□ -0.87
C2CD3-218ENST00000542484 TTC13Q8NBP0 860 aa9.61□□□□□ -0.87
C2CD3-218ENST00000542484 CCDC102AQ96A19 550 aa9.6□□□□□ -0.87
C2CD3-218ENST00000542484 FAM205CA6NFA0 338 aa9.59□□□□□ -0.87
C2CD3-218ENST00000542484 PRSS12P56730 875 aa9.59□□□□□ -0.87
C2CD3-218ENST00000542484 PADI6Q6TGC4 694 aa9.59□□□□□ -0.87
C2CD3-218ENST00000542484 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
C2CD3-218ENST00000542484 PBX2P40425 430 aa9.58□□□□□ -0.88
C2CD3-218ENST00000542484 ZNF687Q8N1G0 1237 aa9.58□□□□□ -0.88
C2CD3-218ENST00000542484 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
C2CD3-218ENST00000542484 KCNH8Q96L42 1107 aa9.58□□□□□ -0.88
C2CD3-218ENST00000542484 TRIM66O15016 1216 aa9.57□□□□□ -0.88
C2CD3-218ENST00000542484 POTEEQ6S8J3 1075 aa9.57□□□□□ -0.88
C2CD3-218ENST00000542484 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
C2CD3-218ENST00000542484 ARHGAP33O14559 1287 aa9.56□□□□□ -0.88
C2CD3-218ENST00000542484 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
C2CD3-218ENST00000542484 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
C2CD3-218ENST00000542484 PSEN2P49810 448 aa9.54□□□□□ -0.88
C2CD3-218ENST00000542484 BRPF1P55201 1214 aaPredicted RBP9.54□□□□□ -0.88
C2CD3-218ENST00000542484 AMHR2Q16671 573 aa9.54□□□□□ -0.88
C2CD3-218ENST00000542484 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
C2CD3-218ENST00000542484 ADGRG1Q9Y653 693 aa9.54□□□□□ -0.88
C2CD3-218ENST00000542484 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
C2CD3-218ENST00000542484 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
C2CD3-218ENST00000542484 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
C2CD3-218ENST00000542484 SLC4A5Q9BY07 1137 aa9.53□□□□□ -0.88
C2CD3-218ENST00000542484 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
C2CD3-218ENST00000542484 OATP04181 439 aa9.52□□□□□ -0.89
C2CD3-218ENST00000542484 PDE4DQ08499 809 aa9.52□□□□□ -0.89
C2CD3-218ENST00000542484 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
C2CD3-218ENST00000542484 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
C2CD3-218ENST00000542484 NEUROD2Q15784 382 aa9.5□□□□□ -0.89
C2CD3-218ENST00000542484 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
C2CD3-218ENST00000542484 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
C2CD3-218ENST00000542484 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
C2CD3-218ENST00000542484 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
C2CD3-218ENST00000542484 PACS2Q86VP3 889 aa9.49□□□□□ -0.89
C2CD3-218ENST00000542484 PHOX2BQ99453 314 aa9.49□□□□□ -0.89
C2CD3-218ENST00000542484 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
C2CD3-218ENST00000542484 RBM46Q8TBY0 533 aaKnown RBP9.48□□□□□ -0.89
C2CD3-218ENST00000542484 EYA1Q99502 592 aa9.47□□□□□ -0.89
C2CD3-218ENST00000542484 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
C2CD3-218ENST00000542484 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
C2CD3-218ENST00000542484 TATDN2Q93075 761 aa9.46□□□□□ -0.9
C2CD3-218ENST00000542484 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
C2CD3-218ENST00000542484 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.9
C2CD3-218ENST00000542484 VPS9D1Q9Y2B5 631 aa9.46□□□□□ -0.9
C2CD3-218ENST00000542484 TK2O00142 265 aa9.45□□□□□ -0.9
C2CD3-218ENST00000542484 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
C2CD3-218ENST00000542484 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
C2CD3-218ENST00000542484 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
C2CD3-218ENST00000542484 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
C2CD3-218ENST00000542484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
C2CD3-218ENST00000542484 LSM11P83369 360 aaKnown RBP eCLIP9.44□□□□□ -0.9
C2CD3-218ENST00000542484 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
C2CD3-218ENST00000542484 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
C2CD3-218ENST00000542484 CLCN1P35523 988 aa9.43□□□□□ -0.9
C2CD3-218ENST00000542484 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
C2CD3-218ENST00000542484 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
C2CD3-218ENST00000542484 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
C2CD3-218ENST00000542484 RCCD1A6NED2 376 aa9.41□□□□□ -0.9
C2CD3-218ENST00000542484 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
C2CD3-218ENST00000542484 BHMG1C9JSJ3 638 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-218ENST00000542484 SMAPO00193 183 aa9.4□□□□□ -0.9
C2CD3-218ENST00000542484 DNAJB2P25686 324 aa9.4□□□□□ -0.9
C2CD3-218ENST00000542484 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
C2CD3-218ENST00000542484 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
C2CD3-218ENST00000542484 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
C2CD3-218ENST00000542484 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
C2CD3-218ENST00000542484 FAM98CQ17RN3 349 aaKnown RBP9.38□□□□□ -0.91
C2CD3-218ENST00000542484 TMEM132AQ24JP5 1023 aa9.38□□□□□ -0.91
C2CD3-218ENST00000542484 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
C2CD3-218ENST00000542484 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
C2CD3-218ENST00000542484 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
C2CD3-218ENST00000542484 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
C2CD3-218ENST00000542484 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
C2CD3-218ENST00000542484 DAXXQ9UER7 740 aaPredicted RBP9.37□□□□□ -0.91
C2CD3-218ENST00000542484 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
C2CD3-218ENST00000542484 HRO43593 1189 aa9.36□□□□□ -0.91
C2CD3-218ENST00000542484 MS4A1P11836 297 aa9.36□□□□□ -0.91
C2CD3-218ENST00000542484 POTEMA6NI47 508 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms