RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 TSPY10P0CW01 314 aa20.81■□□□□ 0.92
CDK2AP1-205ENST00000542174 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
CDK2AP1-205ENST00000542174 CCDC141Q6ZP82 1450 aa20.79■□□□□ 0.92
CDK2AP1-205ENST00000542174 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
CDK2AP1-205ENST00000542174 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
CDK2AP1-205ENST00000542174 MAST1Q9Y2H9 1570 aa20.78■□□□□ 0.92
CDK2AP1-205ENST00000542174 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
CDK2AP1-205ENST00000542174 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.92
CDK2AP1-205ENST00000542174 POLR1AO95602 1720 aaPredicted RBP20.76■□□□□ 0.91
CDK2AP1-205ENST00000542174 ANP32CO43423 234 aa20.76■□□□□ 0.91
CDK2AP1-205ENST00000542174 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
CDK2AP1-205ENST00000542174 HSPA5P11021 654 aaKnown RBP20.75■□□□□ 0.91
CDK2AP1-205ENST00000542174 PLEKHH2Q8IVE3 1493 aa20.74■□□□□ 0.91
CDK2AP1-205ENST00000542174 HECW2Q9P2P5 1572 aa20.73■□□□□ 0.91
CDK2AP1-205ENST00000542174 ATP10AO60312 1499 aa20.73■□□□□ 0.91
CDK2AP1-205ENST00000542174 KIF15Q9NS87 1388 aa20.73■□□□□ 0.91
CDK2AP1-205ENST00000542174 HNRNPMP52272 730 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK2AP1-205ENST00000542174 SYCP2Q9BX26 1530 aa20.71■□□□□ 0.91
CDK2AP1-205ENST00000542174 PKD2Q13563 968 aa20.71■□□□□ 0.91
CDK2AP1-205ENST00000542174 DIP2CQ9Y2E4 1556 aa20.71■□□□□ 0.91
CDK2AP1-205ENST00000542174 NUP155O75694 1391 aa20.7■□□□□ 0.9
CDK2AP1-205ENST00000542174 MADDQ8WXG6 1647 aa20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 PLXNC1O60486 1568 aa20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 REREQ9P2R6 1566 aa20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 ABCA6Q8N139 1617 aa20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 MYT1Q01538 1121 aa20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 ARID4BQ4LE39 1312 aaPredicted RBP20.69■□□□□ 0.9
CDK2AP1-205ENST00000542174 NBPF8Q3BBV2 869 aa20.68■□□□□ 0.9
CDK2AP1-205ENST00000542174 PTPRMP28827 1452 aa20.68■□□□□ 0.9
CDK2AP1-205ENST00000542174 WASHC2AQ641Q2 1341 aa20.67■□□□□ 0.9
CDK2AP1-205ENST00000542174 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
CDK2AP1-205ENST00000542174 UNC13BO14795 1591 aa20.65■□□□□ 0.9
CDK2AP1-205ENST00000542174 UHRF1BP1Q6BDS2 1440 aa20.63■□□□□ 0.89
CDK2AP1-205ENST00000542174 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
CDK2AP1-205ENST00000542174 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
CDK2AP1-205ENST00000542174 AGLP35573 1532 aa20.61■□□□□ 0.89
CDK2AP1-205ENST00000542174 FAM135AQ9P2D6 1515 aa20.61■□□□□ 0.89
CDK2AP1-205ENST00000542174 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
CDK2AP1-205ENST00000542174 RIMS1Q86UR5 1692 aaKnown RBP20.6■□□□□ 0.89
CDK2AP1-205ENST00000542174 ATP7AQ04656 1500 aa20.58■□□□□ 0.89
CDK2AP1-205ENST00000542174 DUOX2Q9NRD8 1548 aa20.58■□□□□ 0.89
CDK2AP1-205ENST00000542174 SPAG9O60271 1321 aaKnown RBP20.58■□□□□ 0.88
CDK2AP1-205ENST00000542174 IQGAP3Q86VI3 1631 aa20.58■□□□□ 0.88
CDK2AP1-205ENST00000542174 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
CDK2AP1-205ENST00000542174 RALGAPBQ86X10 1494 aa20.56■□□□□ 0.88
CDK2AP1-205ENST00000542174 MLECQ14165 292 aa20.54■□□□□ 0.88
CDK2AP1-205ENST00000542174 MYT1LQ9UL68 1186 aa20.54■□□□□ 0.88
CDK2AP1-205ENST00000542174 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
CDK2AP1-205ENST00000542174 RTEL1-TNFRSF6BF6WH68 1400 aa20.53■□□□□ 0.88
CDK2AP1-205ENST00000542174 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
CDK2AP1-205ENST00000542174 USP47Q96K76 1375 aa20.49■□□□□ 0.87
CDK2AP1-205ENST00000542174 A2MP01023 1474 aa20.48■□□□□ 0.87
CDK2AP1-205ENST00000542174 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
CDK2AP1-205ENST00000542174 LMTK3Q96Q04 1460 aa20.46■□□□□ 0.87
CDK2AP1-205ENST00000542174 CCDC144AA2RUR9 1427 aa20.45■□□□□ 0.86
CDK2AP1-205ENST00000542174 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
CDK2AP1-205ENST00000542174 PLA2R1Q13018 1463 aa20.42■□□□□ 0.86
CDK2AP1-205ENST00000542174 DHX29Q7Z478 1369 aaKnown RBP20.42■□□□□ 0.86
CDK2AP1-205ENST00000542174 TRPM1Q7Z4N2 1603 aa20.42■□□□□ 0.86
CDK2AP1-205ENST00000542174 PRKRIP1Q9H875 184 aaPredicted RBP20.41■□□□□ 0.86
CDK2AP1-205ENST00000542174 CEBPAP49715 358 aaPredicted RBP20.4■□□□□ 0.86
CDK2AP1-205ENST00000542174 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
CDK2AP1-205ENST00000542174 SETD1BQ9UPS6 1966 aaKnown RBP20.4■□□□□ 0.86
CDK2AP1-205ENST00000542174 LAMC1P11047 1609 aa20.4■□□□□ 0.86
CDK2AP1-205ENST00000542174 C3P01024 1663 aa20.39■□□□□ 0.86
CDK2AP1-205ENST00000542174 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.86
CDK2AP1-205ENST00000542174 DEPDC5O75140 1603 aa20.39■□□□□ 0.85
CDK2AP1-205ENST00000542174 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
CDK2AP1-205ENST00000542174 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
CDK2AP1-205ENST00000542174 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
CDK2AP1-205ENST00000542174 PRAG1Q86YV5 1406 aa20.37■□□□□ 0.85
CDK2AP1-205ENST00000542174 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
CDK2AP1-205ENST00000542174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDK2AP1-205ENST00000542174 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
CDK2AP1-205ENST00000542174 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
CDK2AP1-205ENST00000542174 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
CDK2AP1-205ENST00000542174 E9PCH4 1651 aa20.33■□□□□ 0.85
CDK2AP1-205ENST00000542174 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
CDK2AP1-205ENST00000542174 GPRASP1Q5JY77 1395 aa20.32■□□□□ 0.84
CDK2AP1-205ENST00000542174 ZMYM3Q14202 1370 aa20.32■□□□□ 0.84
CDK2AP1-205ENST00000542174 TET3O43151 1660 aa20.31■□□□□ 0.84
CDK2AP1-205ENST00000542174 CLTCQ00610 1675 aaKnown RBP20.31■□□□□ 0.84
CDK2AP1-205ENST00000542174 GGT6Q6P531 493 aa20.31■□□□□ 0.84
CDK2AP1-205ENST00000542174 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
CDK2AP1-205ENST00000542174 CEP152O94986 1710 aa20.29■□□□□ 0.84
CDK2AP1-205ENST00000542174 VWDEQ8N2E2 1590 aa20.29■□□□□ 0.84
CDK2AP1-205ENST00000542174 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
CDK2AP1-205ENST00000542174 NPATQ14207 1427 aa20.28■□□□□ 0.84
CDK2AP1-205ENST00000542174 HSPA2P54652 639 aa20.28■□□□□ 0.84
CDK2AP1-205ENST00000542174 KIF3BO15066 747 aa20.27■□□□□ 0.84
CDK2AP1-205ENST00000542174 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK2AP1-205ENST00000542174 TRPM2O94759 1503 aa20.27■□□□□ 0.84
CDK2AP1-205ENST00000542174 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.84
CDK2AP1-205ENST00000542174 ST20-MTHFSA0A0A6YYL1 179 aa20.26■□□□□ 0.83
CDK2AP1-205ENST00000542174 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
CDK2AP1-205ENST00000542174 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
CDK2AP1-205ENST00000542174 PTPRTO14522 1441 aa20.25■□□□□ 0.83
CDK2AP1-205ENST00000542174 CCDC184Q52MB2 194 aa20.25■□□□□ 0.83
CDK2AP1-205ENST00000542174 NEFLP07196 543 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms