RNA–Protein interactions for RNA: ENST00000542114.1

COL6A4P2-206, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-206ENST00000542114 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
COL6A4P2-206ENST00000542114 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
COL6A4P2-206ENST00000542114 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
COL6A4P2-206ENST00000542114 OSBPP22059 807 aa9.44□□□□□ -0.9
COL6A4P2-206ENST00000542114 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
COL6A4P2-206ENST00000542114 TESPA1A2RU30 521 aaPredicted RBP9.43□□□□□ -0.9
COL6A4P2-206ENST00000542114 LSM11P83369 360 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL6A4P2-206ENST00000542114 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
COL6A4P2-206ENST00000542114 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P2-206ENST00000542114 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
COL6A4P2-206ENST00000542114 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
COL6A4P2-206ENST00000542114 PRIM1P49642 420 aaKnown RBP9.39□□□□□ -0.91
COL6A4P2-206ENST00000542114 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
COL6A4P2-206ENST00000542114 COL9A1P20849 921 aa9.38□□□□□ -0.91
COL6A4P2-206ENST00000542114 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
COL6A4P2-206ENST00000542114 TK2O00142 265 aa9.36□□□□□ -0.91
COL6A4P2-206ENST00000542114 ADGRD1Q6QNK2 874 aa9.36□□□□□ -0.91
COL6A4P2-206ENST00000542114 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
COL6A4P2-206ENST00000542114 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
COL6A4P2-206ENST00000542114 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
COL6A4P2-206ENST00000542114 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
COL6A4P2-206ENST00000542114 SLC4A5Q9BY07 1137 aa9.34□□□□□ -0.91
COL6A4P2-206ENST00000542114 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
COL6A4P2-206ENST00000542114 VPS9D1Q9Y2B5 631 aa9.34□□□□□ -0.91
COL6A4P2-206ENST00000542114 SPNS2Q8IVW8 549 aa9.33□□□□□ -0.92
COL6A4P2-206ENST00000542114 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
COL6A4P2-206ENST00000542114 PRSS12P56730 875 aa9.3□□□□□ -0.92
COL6A4P2-206ENST00000542114 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
COL6A4P2-206ENST00000542114 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
COL6A4P2-206ENST00000542114 BCANQ96GW7 911 aa9.29□□□□□ -0.92
COL6A4P2-206ENST00000542114 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
COL6A4P2-206ENST00000542114 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 FCHSD2O94868 740 aa9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 PTGDRQ13258 359 aa9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
COL6A4P2-206ENST00000542114 HRO43593 1189 aa9.27□□□□□ -0.93
COL6A4P2-206ENST00000542114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.27□□□□□ -0.93
COL6A4P2-206ENST00000542114 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
COL6A4P2-206ENST00000542114 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
COL6A4P2-206ENST00000542114 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
COL6A4P2-206ENST00000542114 GOLGA8CPA6NN73 597 aa9.25□□□□□ -0.93
COL6A4P2-206ENST00000542114 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
COL6A4P2-206ENST00000542114 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
COL6A4P2-206ENST00000542114 BHMG1C9JSJ3 638 aaPredicted RBP9.24□□□□□ -0.93
COL6A4P2-206ENST00000542114 HIC1Q14526 733 aa9.24□□□□□ -0.93
COL6A4P2-206ENST00000542114 LMOD2Q6P5Q4 547 aa9.24□□□□□ -0.93
COL6A4P2-206ENST00000542114 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
COL6A4P2-206ENST00000542114 MMRN1Q13201 1228 aa9.23□□□□□ -0.93
COL6A4P2-206ENST00000542114 PNMA3Q9UL41 463 aa9.22□□□□□ -0.93
COL6A4P2-206ENST00000542114 NBPF26B4DH59 902 aa9.21□□□□□ -0.94
COL6A4P2-206ENST00000542114 GNPATO15228 680 aa9.21□□□□□ -0.94
COL6A4P2-206ENST00000542114 TATDN2Q93075 761 aa9.21□□□□□ -0.94
COL6A4P2-206ENST00000542114 RNF166Q96A37 237 aaPredicted RBP9.21□□□□□ -0.94
COL6A4P2-206ENST00000542114 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.94
COL6A4P2-206ENST00000542114 SEPT9Q9UHD8 586 aaPredicted RBP9.21□□□□□ -0.94
COL6A4P2-206ENST00000542114 NUDT18Q6ZVK8 323 aa9.2□□□□□ -0.94
COL6A4P2-206ENST00000542114 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
COL6A4P2-206ENST00000542114 SMAPO00193 183 aa9.19□□□□□ -0.94
COL6A4P2-206ENST00000542114 TTC13Q8NBP0 860 aa9.19□□□□□ -0.94
COL6A4P2-206ENST00000542114 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
COL6A4P2-206ENST00000542114 KCTD12Q96CX2 325 aaKnown RBP9.18□□□□□ -0.94
COL6A4P2-206ENST00000542114 GPR37O15354 613 aa9.17□□□□□ -0.94
COL6A4P2-206ENST00000542114 WNT2BQ93097 391 aa9.17□□□□□ -0.94
COL6A4P2-206ENST00000542114 FECHP22830 423 aa9.16□□□□□ -0.94
COL6A4P2-206ENST00000542114 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
COL6A4P2-206ENST00000542114 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
COL6A4P2-206ENST00000542114 C3orf80F5H4A9 247 aa9.15□□□□□ -0.94
COL6A4P2-206ENST00000542114 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.94
COL6A4P2-206ENST00000542114 ANKK1Q8NFD2 765 aa9.15□□□□□ -0.94
COL6A4P2-206ENST00000542114 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
COL6A4P2-206ENST00000542114 ADGRG1Q9Y653 693 aa9.14□□□□□ -0.95
COL6A4P2-206ENST00000542114 OATP04181 439 aa9.13□□□□□ -0.95
COL6A4P2-206ENST00000542114 ZC3H15Q8WU90 426 aaKnown RBP9.12□□□□□ -0.95
COL6A4P2-206ENST00000542114 EYA1Q99502 592 aa9.12□□□□□ -0.95
COL6A4P2-206ENST00000542114 KRI1Q8N9T8 703 aaKnown RBP9.11□□□□□ -0.95
COL6A4P2-206ENST00000542114 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
COL6A4P2-206ENST00000542114 PTPN5P54829 565 aa9.1□□□□□ -0.95
COL6A4P2-206ENST00000542114 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
COL6A4P2-206ENST00000542114 THSD4Q6ZMP0 1018 aa9.1□□□□□ -0.95
COL6A4P2-206ENST00000542114 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.1□□□□□ -0.95
COL6A4P2-206ENST00000542114 DNAJB2P25686 324 aa9.09□□□□□ -0.95
COL6A4P2-206ENST00000542114 SAMD7Q7Z3H4 446 aa9.09□□□□□ -0.95
COL6A4P2-206ENST00000542114 HCSTQ9UBK5 93 aa9.09□□□□□ -0.95
COL6A4P2-206ENST00000542114 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 ZMYND10O75800 440 aa9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 BCAMP50895 628 aa9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 METTL3Q86U44 580 aaKnown RBP9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
COL6A4P2-206ENST00000542114 RCCD1A6NED2 376 aa9.07□□□□□ -0.96
COL6A4P2-206ENST00000542114 IRF6O14896 467 aa9.07□□□□□ -0.96
COL6A4P2-206ENST00000542114 RNF40O75150 1001 aa9.07□□□□□ -0.96
COL6A4P2-206ENST00000542114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
COL6A4P2-206ENST00000542114 SWT1Q5T5J6 900 aaKnown RBP9.06□□□□□ -0.96
COL6A4P2-206ENST00000542114 BARGINQ6ZT62 677 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms