RNA–Protein interactions for RNA: ENST00000542114.1

COL6A4P2-206, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-206ENST00000542114 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
COL6A4P2-206ENST00000542114 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
COL6A4P2-206ENST00000542114 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
COL6A4P2-206ENST00000542114 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
COL6A4P2-206ENST00000542114 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
COL6A4P2-206ENST00000542114 FOXD1Q16676 465 aa17.06■□□□□ 0.32
COL6A4P2-206ENST00000542114 ADRA2BP18089 450 aa16.36■□□□□ 0.21
COL6A4P2-206ENST00000542114 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
COL6A4P2-206ENST00000542114 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
COL6A4P2-206ENST00000542114 MSH5O43196 834 aa15.82■□□□□ 0.12
COL6A4P2-206ENST00000542114 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
COL6A4P2-206ENST00000542114 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
COL6A4P2-206ENST00000542114 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
COL6A4P2-206ENST00000542114 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
COL6A4P2-206ENST00000542114 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
COL6A4P2-206ENST00000542114 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
COL6A4P2-206ENST00000542114 KCNA4P22459 653 aa14.59□□□□□ -0.07
COL6A4P2-206ENST00000542114 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
COL6A4P2-206ENST00000542114 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
COL6A4P2-206ENST00000542114 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
COL6A4P2-206ENST00000542114 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
COL6A4P2-206ENST00000542114 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
COL6A4P2-206ENST00000542114 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
COL6A4P2-206ENST00000542114 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
COL6A4P2-206ENST00000542114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL6A4P2-206ENST00000542114 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
COL6A4P2-206ENST00000542114 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
COL6A4P2-206ENST00000542114 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
COL6A4P2-206ENST00000542114 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
COL6A4P2-206ENST00000542114 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
COL6A4P2-206ENST00000542114 ZBTB22O15209 634 aa13.39□□□□□ -0.27
COL6A4P2-206ENST00000542114 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
COL6A4P2-206ENST00000542114 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
COL6A4P2-206ENST00000542114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
COL6A4P2-206ENST00000542114 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
COL6A4P2-206ENST00000542114 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
COL6A4P2-206ENST00000542114 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
COL6A4P2-206ENST00000542114 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
COL6A4P2-206ENST00000542114 APLP2Q06481 763 aa13.19□□□□□ -0.3
COL6A4P2-206ENST00000542114 CAPN15O75808 1086 aa13.09□□□□□ -0.31
COL6A4P2-206ENST00000542114 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
COL6A4P2-206ENST00000542114 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
COL6A4P2-206ENST00000542114 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
COL6A4P2-206ENST00000542114 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
COL6A4P2-206ENST00000542114 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
COL6A4P2-206ENST00000542114 DSG3P32926 999 aa12.83□□□□□ -0.36
COL6A4P2-206ENST00000542114 ABCB7O75027 752 aa12.81□□□□□ -0.36
COL6A4P2-206ENST00000542114 POLA2Q14181 598 aa12.76□□□□□ -0.37
COL6A4P2-206ENST00000542114 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
COL6A4P2-206ENST00000542114 FBLN2P98095 1184 aa12.49□□□□□ -0.41
COL6A4P2-206ENST00000542114 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
COL6A4P2-206ENST00000542114 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
COL6A4P2-206ENST00000542114 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
COL6A4P2-206ENST00000542114 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
COL6A4P2-206ENST00000542114 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
COL6A4P2-206ENST00000542114 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
COL6A4P2-206ENST00000542114 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
COL6A4P2-206ENST00000542114 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
COL6A4P2-206ENST00000542114 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
COL6A4P2-206ENST00000542114 FKBP8Q14318 412 aa12.05□□□□□ -0.48
COL6A4P2-206ENST00000542114 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
COL6A4P2-206ENST00000542114 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL6A4P2-206ENST00000542114 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
COL6A4P2-206ENST00000542114 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P2-206ENST00000542114 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
COL6A4P2-206ENST00000542114 PROM2Q8N271 834 aa11.82□□□□□ -0.52
COL6A4P2-206ENST00000542114 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
COL6A4P2-206ENST00000542114 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
COL6A4P2-206ENST00000542114 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
COL6A4P2-206ENST00000542114 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
COL6A4P2-206ENST00000542114 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
COL6A4P2-206ENST00000542114 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL6A4P2-206ENST00000542114 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
COL6A4P2-206ENST00000542114 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
COL6A4P2-206ENST00000542114 MIER1Q8N108 512 aa11.54□□□□□ -0.56
COL6A4P2-206ENST00000542114 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
COL6A4P2-206ENST00000542114 CHADLQ6NUI6 762 aa11.52□□□□□ -0.57
COL6A4P2-206ENST00000542114 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
COL6A4P2-206ENST00000542114 POTEHQ6S545 545 aa11.5□□□□□ -0.57
COL6A4P2-206ENST00000542114 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
COL6A4P2-206ENST00000542114 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
COL6A4P2-206ENST00000542114 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
COL6A4P2-206ENST00000542114 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
COL6A4P2-206ENST00000542114 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
COL6A4P2-206ENST00000542114 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL6A4P2-206ENST00000542114 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
COL6A4P2-206ENST00000542114 HAX1O00165 279 aa11.3□□□□□ -0.6
COL6A4P2-206ENST00000542114 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
COL6A4P2-206ENST00000542114 C19orf67A6NJJ6 358 aa11.21□□□□□ -0.61
COL6A4P2-206ENST00000542114 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
COL6A4P2-206ENST00000542114 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
COL6A4P2-206ENST00000542114 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
COL6A4P2-206ENST00000542114 NUBP1P53384 320 aa11.18□□□□□ -0.62
COL6A4P2-206ENST00000542114 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P2-206ENST00000542114 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
COL6A4P2-206ENST00000542114 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
COL6A4P2-206ENST00000542114 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
COL6A4P2-206ENST00000542114 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
COL6A4P2-206ENST00000542114 EVX2Q03828 476 aa11.12□□□□□ -0.63
COL6A4P2-206ENST00000542114 GSE1Q14687 1217 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms