RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 LAPTM4BQ86VI4 370 aa7.69□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 PROX2Q3B8N5 592 aa7.68□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 IRX2Q9BZI1 471 aaPredicted RBP7.68□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 COL9A1P20849 921 aa7.67□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 EPAS1Q99814 870 aa7.66□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 ITGBL1O95965 494 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 DCAF8L2P0C7V8 631 aa7.65□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 NYAP1Q6ZVC0 841 aa7.65□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 CADPS2Q86UW7 1296 aa7.65□□□□□ -1.18
CACNA1C-IT2-201ENST00000541871 SOWAHBA6NEL2 793 aa7.64□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 CAMK2BQ13554 666 aa7.64□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 KIAA1468Q9P260 1216 aa7.64□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 BCAMP50895 628 aa7.63□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 C6orf132Q5T0Z8 1188 aa7.63□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 TRIM6-TRIM34B2RNG4 842 aa7.6□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 DPYSL4O14531 572 aa7.6□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 FAM98CQ17RN3 349 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-IT2-201ENST00000541871 KCNC4Q03721 635 aa7.58□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 WBP1LQ9NX94 342 aa7.58□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 SEPT9Q9UHD8 586 aaPredicted RBP7.58□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 TSR3Q9UJK0 312 aaKnown RBP7.57□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 RBM33Q96EV2 1170 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 DDX12PQ92771 950 aa7.55□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 LRCH3Q96II8 777 aa7.55□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 EN1Q05925 392 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 PACS2Q86VP3 889 aa7.54□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 DAXXQ9UER7 740 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-IT2-201ENST00000541871 MAP3K7O43318 606 aa7.52□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 NBR1Q14596 966 aa7.52□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 PDIA6Q15084 440 aa7.52□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 SPDYE16A6NNV3 312 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 TSKSQ9UJT2 592 aa7.51□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 PPP4CP60510 307 aa7.5□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 TSR1Q2NL82 804 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 BBXQ8WY36 941 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 Q6ZNB5 142 aa7.49□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 TTBK1Q5TCY1 1321 aaPredicted RBP7.49□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 MYT1Q01538 1121 aa7.48□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 LAPTM4AQ15012 233 aa7.48□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 CDCA7LQ96GN5 454 aa7.48□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 PRSS12P56730 875 aa7.47□□□□□ -1.21
CACNA1C-IT2-201ENST00000541871 SAMD7Q7Z3H4 446 aa7.45□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 ARIH1Q9Y4X5 557 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 NBPF26B4DH59 902 aa7.44□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 E2F4Q16254 413 aa7.44□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 TJAP1Q5JTD0 557 aa7.44□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 SMAPO00193 183 aa7.43□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 SPRYD3Q8NCJ5 442 aa7.43□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 TATDN2Q93075 761 aa7.43□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 FAM198AQ9UFP1 575 aa7.43□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 IL21Q9HBE4 155 aa7.42□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 PNMA3Q9UL41 463 aa7.42□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 GRXCR2A6NFK2 248 aa7.41□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 HDGFP51858 240 aaKnown RBP7.41□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 MTRQ99707 1265 aa7.41□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 GFRA3O60609 400 aa7.4□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 WDR70Q9NW82 654 aa7.4□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-IT2-201ENST00000541871 NECTIN2Q92692 538 aa7.39□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 PRKD2Q9BZL6 878 aa7.39□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 C3orf80F5H4A9 247 aa7.38□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 OSBPP22059 807 aa7.38□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 PPP1R18Q6NYC8 613 aa7.38□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 TRAF7Q6Q0C0 670 aa7.38□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 V9GY48 417 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 NRG2O14511 850 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 RNF40O75150 1001 aa7.36□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 CDHR5Q9HBB8 845 aa7.36□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 APLP1P51693 650 aa7.35□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 TTC13Q8NBP0 860 aa7.35□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 LCE2BO14633 110 aa7.34□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
CACNA1C-IT2-201ENST00000541871 GGCXP38435 758 aa7.33□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 SLC4A3P48751 1232 aa7.33□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 SWT1Q5T5J6 900 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 PADI6Q6TGC4 694 aa7.31□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 PAXIP1Q6ZW49 1069 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 CFAP44Q96MT7 982 aa7.31□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 TMUB1Q9BVT8 246 aa7.31□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 NKX2-3Q8TAU0 364 aa7.3□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 PRR14Q9BWN1 585 aa7.3□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 COPS2P61201 443 aa7.29□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 EYA1Q99502 592 aa7.28□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 PDZRN3Q9UPQ7 1066 aa7.28□□□□□ -1.24
CACNA1C-IT2-201ENST00000541871 ZPR1O75312 459 aa7.27□□□□□ -1.25
CACNA1C-IT2-201ENST00000541871 RTN4Q9NQC3 1192 aaKnown RBP7.26□□□□□ -1.25
CACNA1C-IT2-201ENST00000541871 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
CACNA1C-IT2-201ENST00000541871 PCDHB3Q9Y5E6 796 aa7.25□□□□□ -1.25
CACNA1C-IT2-201ENST00000541871 DNAJB2P25686 324 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms