RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ODF2Q5BJF6 829 aa18.92■□□□□ 0.62
HMGA2-210ENST00000541363 CTDP1Q9Y5B0 961 aaPredicted RBP18.92■□□□□ 0.62
HMGA2-210ENST00000541363 FOXD4L5Q5VV16 416 aaPredicted RBP18.92■□□□□ 0.62
HMGA2-210ENST00000541363 FOXD4L4Q8WXT5 416 aaPredicted RBP18.92■□□□□ 0.62
HMGA2-210ENST00000541363 APPP05067 770 aa18.91■□□□□ 0.62
HMGA2-210ENST00000541363 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
HMGA2-210ENST00000541363 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
HMGA2-210ENST00000541363 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
HMGA2-210ENST00000541363 HOMER1Q86YM7 354 aa18.9■□□□□ 0.62
HMGA2-210ENST00000541363 SYNE3Q6ZMZ3 975 aa18.9■□□□□ 0.62
HMGA2-210ENST00000541363 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.62
HMGA2-210ENST00000541363 TRIM34Q9BYJ4 488 aa18.89■□□□□ 0.61
HMGA2-210ENST00000541363 IPO9Q96P70 1041 aaKnown RBP18.89■□□□□ 0.61
HMGA2-210ENST00000541363 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
HMGA2-210ENST00000541363 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-210ENST00000541363 ARGLU1Q9NWB6 273 aaPredicted RBP18.87■□□□□ 0.61
HMGA2-210ENST00000541363 TRIM29Q14134 588 aa18.87■□□□□ 0.61
HMGA2-210ENST00000541363 SMC4Q9NTJ3 1288 aa18.86■□□□□ 0.61
HMGA2-210ENST00000541363 NAP1L1P55209 391 aaKnown RBP18.86■□□□□ 0.61
HMGA2-210ENST00000541363 DCAF11Q8TEB1 546 aa18.86■□□□□ 0.61
HMGA2-210ENST00000541363 CWC15Q9P013 229 aaKnown RBP18.85■□□□□ 0.61
HMGA2-210ENST00000541363 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
HMGA2-210ENST00000541363 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
HMGA2-210ENST00000541363 MCTP1Q6DN14 999 aa18.84■□□□□ 0.61
HMGA2-210ENST00000541363 SLC4A10Q6U841 1118 aa18.84■□□□□ 0.61
HMGA2-210ENST00000541363 HSP90B2PQ58FF3 399 aa18.84■□□□□ 0.61
HMGA2-210ENST00000541363 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
HMGA2-210ENST00000541363 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
HMGA2-210ENST00000541363 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.618e-8■■□□□ 13.6
HMGA2-210ENST00000541363 MYO6Q9UM54 1294 aa18.84■□□□□ 0.61
HMGA2-210ENST00000541363 NOL10Q9BSC4 688 aaKnown RBP18.84■□□□□ 0.61
HMGA2-210ENST00000541363 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
HMGA2-210ENST00000541363 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.61
HMGA2-210ENST00000541363 ZRSR2Q15696 482 aaKnown RBP18.83■□□□□ 0.61
HMGA2-210ENST00000541363 LRRFIP1Q32MZ4 808 aaKnown RBP18.83■□□□□ 0.61
HMGA2-210ENST00000541363 CCDC173Q0VFZ6 552 aa18.83■□□□□ 0.6
HMGA2-210ENST00000541363 H0YHG0 523 aa18.83■□□□□ 0.6
HMGA2-210ENST00000541363 CCDC43Q96MW1 224 aaKnown RBP18.82■□□□□ 0.6
HMGA2-210ENST00000541363 HSP90AB2PQ58FF8 381 aa18.82■□□□□ 0.6
HMGA2-210ENST00000541363 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
HMGA2-210ENST00000541363 CPLX2Q6PUV4 134 aaKnown RBP18.81■□□□□ 0.6
HMGA2-210ENST00000541363 RAD21O60216 631 aa18.79■□□□□ 0.6
HMGA2-210ENST00000541363 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
HMGA2-210ENST00000541363 EPS15P42566 896 aa18.77■□□□□ 0.6
HMGA2-210ENST00000541363 RILPL2Q969X0 211 aa18.77■□□□□ 0.6
HMGA2-210ENST00000541363 FAM13BQ9NYF5 915 aa18.77■□□□□ 0.6
HMGA2-210ENST00000541363 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.77■□□□□ 0.59
HMGA2-210ENST00000541363 PLCD4Q9BRC7 762 aa18.77■□□□□ 0.59
HMGA2-210ENST00000541363 CWC22Q9HCG8 908 aaKnown RBP18.77■□□□□ 0.59
HMGA2-210ENST00000541363 STK26Q9P289 416 aa18.77■□□□□ 0.59
HMGA2-210ENST00000541363 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
HMGA2-210ENST00000541363 LMOD3Q0VAK6 560 aa18.76■□□□□ 0.59
HMGA2-210ENST00000541363 ERCC4Q92889 916 aaPredicted RBP18.76■□□□□ 0.59
HMGA2-210ENST00000541363 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
HMGA2-210ENST00000541363 ZFYVE27Q5T4F4 411 aa18.75■□□□□ 0.59
HMGA2-210ENST00000541363 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
HMGA2-210ENST00000541363 R3HCC1Q9Y3T6 440 aaKnown RBP18.75■□□□□ 0.59
HMGA2-210ENST00000541363 NEXNQ0ZGT2 675 aa18.75■□□□□ 0.59
HMGA2-210ENST00000541363 CAGE1Q8TC20 777 aa18.73■□□□□ 0.59
HMGA2-210ENST00000541363 RALBP1Q15311 655 aa18.73■□□□□ 0.59
HMGA2-210ENST00000541363 SASS6Q6UVJ0 657 aa18.72■□□□□ 0.59
HMGA2-210ENST00000541363 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
HMGA2-210ENST00000541363 GSE1Q14687 1217 aa18.71■□□□□ 0.59
HMGA2-210ENST00000541363 EIF3AQ14152 1382 aaKnown RBP18.71■□□□□ 0.58
HMGA2-210ENST00000541363 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
HMGA2-210ENST00000541363 MLECQ14165 292 aa18.7■□□□□ 0.58
HMGA2-210ENST00000541363 RUFY2Q8WXA3 655 aa18.7■□□□□ 0.58
HMGA2-210ENST00000541363 CENPJQ9HC77 1338 aaPredicted RBP18.7■□□□□ 0.58
HMGA2-210ENST00000541363 BICD2Q8TD16 824 aa18.69■□□□□ 0.58
HMGA2-210ENST00000541363 IFT57Q9NWB7 429 aa18.69■□□□□ 0.58
HMGA2-210ENST00000541363 CPLX1O14810 134 aa18.69■□□□□ 0.58
HMGA2-210ENST00000541363 CCDC66A2RUB6 948 aa18.68■□□□□ 0.58
HMGA2-210ENST00000541363 DIAPH3Q9NSV4 1193 aa18.68■□□□□ 0.58
HMGA2-210ENST00000541363 STK11IPQ8N1F8 1099 aa18.68■□□□□ 0.58
HMGA2-210ENST00000541363 ERICH2A1L162 156 aa18.68■□□□□ 0.58
HMGA2-210ENST00000541363 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
HMGA2-210ENST00000541363 OFD1O75665 1012 aa18.67■□□□□ 0.58
HMGA2-210ENST00000541363 HSP90AB3PQ58FF7 597 aa18.67■□□□□ 0.58
HMGA2-210ENST00000541363 ANKRD18AQ8IVF6 992 aa18.66■□□□□ 0.58
HMGA2-210ENST00000541363 PAF1Q8N7H5 531 aa18.66■□□□□ 0.58
HMGA2-210ENST00000541363 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
HMGA2-210ENST00000541363 TRDNQ13061 729 aa18.66■□□□□ 0.58
HMGA2-210ENST00000541363 NEFHP12036 1026 aa18.65■□□□□ 0.58
HMGA2-210ENST00000541363 MTERF4Q7Z6M4 381 aaKnown RBP18.65■□□□□ 0.58
HMGA2-210ENST00000541363 OLFM4Q6UX06 510 aa18.65■□□□□ 0.58
HMGA2-210ENST00000541363 WWC2Q6AWC2 1192 aa18.65■□□□□ 0.58
HMGA2-210ENST00000541363 NAT10Q9H0A0 1025 aaKnown RBP18.65■□□□□ 0.58
HMGA2-210ENST00000541363 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
HMGA2-210ENST00000541363 LEKR1Q6ZMV7 388 aa18.65■□□□□ 0.58
HMGA2-210ENST00000541363 TSPYL1Q9H0U9 437 aa18.64■□□□□ 0.58
HMGA2-210ENST00000541363 NFXL1Q6ZNB6 911 aa18.64■□□□□ 0.57
HMGA2-210ENST00000541363 ANO2Q9NQ90 1003 aa18.64■□□□□ 0.57
HMGA2-210ENST00000541363 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
HMGA2-210ENST00000541363 SEPT7Q16181 437 aaKnown RBP18.63■□□□□ 0.57
HMGA2-210ENST00000541363 ANKRD45Q5TZF3 282 aa18.63■□□□□ 0.57
HMGA2-210ENST00000541363 VPS37DQ86XT2 251 aa18.63■□□□□ 0.57
HMGA2-210ENST00000541363 SKIDA1Q1XH10 827 aa18.63■□□□□ 0.57
HMGA2-210ENST00000541363 CLUAP1Q96AJ1 413 aa18.63■□□□□ 0.57
HMGA2-210ENST00000541363 ERLIN2O94905 339 aa18.62■□□□□ 0.57
HMGA2-210ENST00000541363 SAFBQ15424 915 aaKnown RBP eCLIP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms