RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 PDE4AP27815 886 aa12.06□□□□□ -0.48
RAP1B-224ENST00000541216 RYDENQ9NUL5 291 aaKnown RBP12.06□□□□□ -0.48
RAP1B-224ENST00000541216 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
RAP1B-224ENST00000541216 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
RAP1B-224ENST00000541216 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
RAP1B-224ENST00000541216 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
RAP1B-224ENST00000541216 COL9A1P20849 921 aa12.01□□□□□ -0.49
RAP1B-224ENST00000541216 FBXW7Q969H0 707 aa12.01□□□□□ -0.49
RAP1B-224ENST00000541216 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
RAP1B-224ENST00000541216 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
RAP1B-224ENST00000541216 TYW1BQ6NUM6 668 aa11.98□□□□□ -0.49
RAP1B-224ENST00000541216 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
RAP1B-224ENST00000541216 ZNF787Q6DD87 383 aa11.96□□□□□ -0.49
RAP1B-224ENST00000541216 NCKAP5LQ9HCH0 1330 aa11.95□□□□□ -0.5
RAP1B-224ENST00000541216 FAM98CQ17RN3 349 aaKnown RBP11.95□□□□□ -0.5
RAP1B-224ENST00000541216 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
RAP1B-224ENST00000541216 PRKD2Q9BZL6 878 aa11.95□□□□□ -0.5
RAP1B-224ENST00000541216 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
RAP1B-224ENST00000541216 PHF14O94880 888 aa11.94□□□□□ -0.5
RAP1B-224ENST00000541216 SEPT9Q9UHD8 586 aaPredicted RBP11.94□□□□□ -0.5
RAP1B-224ENST00000541216 DDX27Q96GQ7 796 aaKnown RBP11.92□□□□□ -0.5
RAP1B-224ENST00000541216 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
RAP1B-224ENST00000541216 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
RAP1B-224ENST00000541216 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
RAP1B-224ENST00000541216 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
RAP1B-224ENST00000541216 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
RAP1B-224ENST00000541216 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
RAP1B-224ENST00000541216 EPAS1Q99814 870 aa11.87□□□□□ -0.51
RAP1B-224ENST00000541216 PPP4CP60510 307 aa11.86□□□□□ -0.51
RAP1B-224ENST00000541216 NKX1-1Q15270 411 aaPredicted RBP11.85□□□□□ -0.51
RAP1B-224ENST00000541216 TJAP1Q5JTD0 557 aa11.84□□□□□ -0.51
RAP1B-224ENST00000541216 MFSD10Q14728 455 aa11.83□□□□□ -0.52
RAP1B-224ENST00000541216 ZNF775Q96BV0 537 aaPredicted RBP11.83□□□□□ -0.52
RAP1B-224ENST00000541216 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
RAP1B-224ENST00000541216 PPP1R18Q6NYC8 613 aa11.82□□□□□ -0.52
RAP1B-224ENST00000541216 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
RAP1B-224ENST00000541216 PACS2Q86VP3 889 aa11.8□□□□□ -0.52
RAP1B-224ENST00000541216 IL21Q9HBE4 155 aa11.8□□□□□ -0.52
RAP1B-224ENST00000541216 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
RAP1B-224ENST00000541216 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.79□□□□□ -0.52
RAP1B-224ENST00000541216 MTRQ99707 1265 aa11.76□□□□□ -0.53
RAP1B-224ENST00000541216 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
RAP1B-224ENST00000541216 GGCXP38435 758 aa11.71□□□□□ -0.53
RAP1B-224ENST00000541216 SAMD7Q7Z3H4 446 aa11.69□□□□□ -0.54
RAP1B-224ENST00000541216 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
RAP1B-224ENST00000541216 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
RAP1B-224ENST00000541216 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
RAP1B-224ENST00000541216 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
RAP1B-224ENST00000541216 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
RAP1B-224ENST00000541216 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
RAP1B-224ENST00000541216 DDX12PQ92771 950 aa11.62□□□□□ -0.55
RAP1B-224ENST00000541216 MAP3K7O43318 606 aa11.61□□□□□ -0.55
RAP1B-224ENST00000541216 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
RAP1B-224ENST00000541216 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
RAP1B-224ENST00000541216 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
RAP1B-224ENST00000541216 DPYSL4O14531 572 aa11.6□□□□□ -0.55
RAP1B-224ENST00000541216 SMAPO00193 183 aa11.59□□□□□ -0.55
RAP1B-224ENST00000541216 DGAT1O75907 488 aa11.59□□□□□ -0.55
RAP1B-224ENST00000541216 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
RAP1B-224ENST00000541216 NKX2-3Q8TAU0 364 aa11.59□□□□□ -0.55
RAP1B-224ENST00000541216 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
RAP1B-224ENST00000541216 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
RAP1B-224ENST00000541216 PRSS12P56730 875 aa11.57□□□□□ -0.56
RAP1B-224ENST00000541216 MYT1Q01538 1121 aa11.57□□□□□ -0.56
RAP1B-224ENST00000541216 NBR1Q14596 966 aa11.57□□□□□ -0.56
RAP1B-224ENST00000541216 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
RAP1B-224ENST00000541216 CERKQ8TCT0 537 aa11.57□□□□□ -0.56
RAP1B-224ENST00000541216 RNF40O75150 1001 aa11.56□□□□□ -0.56
RAP1B-224ENST00000541216 APLP1P51693 650 aa11.56□□□□□ -0.56
RAP1B-224ENST00000541216 TATDN2Q93075 761 aa11.56□□□□□ -0.56
RAP1B-224ENST00000541216 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
RAP1B-224ENST00000541216 SLC19A1P41440 591 aa11.53□□□□□ -0.56
RAP1B-224ENST00000541216 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
RAP1B-224ENST00000541216 TREML4Q6UXN2 200 aa11.52□□□□□ -0.57
RAP1B-224ENST00000541216 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
RAP1B-224ENST00000541216 COPS2P61201 443 aa11.51□□□□□ -0.57
RAP1B-224ENST00000541216 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
RAP1B-224ENST00000541216 PRR20EP86478 221 aa11.5□□□□□ -0.57
RAP1B-224ENST00000541216 PRR20CP86479 221 aa11.5□□□□□ -0.57
RAP1B-224ENST00000541216 PRR20DP86480 221 aa11.5□□□□□ -0.57
RAP1B-224ENST00000541216 PRR20BP86481 221 aa11.5□□□□□ -0.57
RAP1B-224ENST00000541216 PRR20AP86496 221 aa11.5□□□□□ -0.57
RAP1B-224ENST00000541216 FAM198AQ9UFP1 575 aa11.5□□□□□ -0.57
RAP1B-224ENST00000541216 POTECB2RU33 542 aa11.49□□□□□ -0.57
RAP1B-224ENST00000541216 ZPR1O75312 459 aa11.48□□□□□ -0.57
RAP1B-224ENST00000541216 CADPS2Q86UW7 1296 aa11.48□□□□□ -0.57
RAP1B-224ENST00000541216 ZNF598Q86UK7 904 aaKnown RBP11.47□□□□□ -0.57
RAP1B-224ENST00000541216 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
RAP1B-224ENST00000541216 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
RAP1B-224ENST00000541216 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
RAP1B-224ENST00000541216 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
RAP1B-224ENST00000541216 C3orf80F5H4A9 247 aa11.45□□□□□ -0.58
RAP1B-224ENST00000541216 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
RAP1B-224ENST00000541216 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
RAP1B-224ENST00000541216 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
RAP1B-224ENST00000541216 PRR14Q9BWN1 585 aa11.44□□□□□ -0.58
RAP1B-224ENST00000541216 FAM187AA6NFU0 413 aa11.43□□□□□ -0.58
RAP1B-224ENST00000541216 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
RAP1B-224ENST00000541216 PDIA6Q15084 440 aa11.43□□□□□ -0.58
RAP1B-224ENST00000541216 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms