RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
LMO3-224ENST00000540848 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
LMO3-224ENST00000540848 ITGAEP38570 1179 aa14.84□□□□□ -0.03
LMO3-224ENST00000540848 PDAP1Q13442 181 aaKnown RBP14.83□□□□□ -0.04
LMO3-224ENST00000540848 CDK11AQ9UQ88 783 aaPredicted RBP14.82□□□□□ -0.04
LMO3-224ENST00000540848 HFM1A2PYH4 1435 aa14.82□□□□□ -0.04
LMO3-224ENST00000540848 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
LMO3-224ENST00000540848 LCE2DQ5TA82 110 aaPredicted RBP14.81□□□□□ -0.04
LMO3-224ENST00000540848 NUP153P49790 1475 aaKnown RBP14.81□□□□□ -0.04
LMO3-224ENST00000540848 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
LMO3-224ENST00000540848 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
LMO3-224ENST00000540848 PDCD7Q8N8D1 485 aaKnown RBP14.81□□□□□ -0.04
LMO3-224ENST00000540848 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
LMO3-224ENST00000540848 TIMELESSQ9UNS1 1208 aa14.79□□□□□ -0.04
LMO3-224ENST00000540848 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
LMO3-224ENST00000540848 JPH4Q96JJ6 628 aa14.77□□□□□ -0.05
LMO3-224ENST00000540848 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
LMO3-224ENST00000540848 ADCY10Q96PN6 1610 aa14.75□□□□□ -0.05
LMO3-224ENST00000540848 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
LMO3-224ENST00000540848 GCC2Q8IWJ2 1684 aa14.75□□□□□ -0.05
LMO3-224ENST00000540848 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
LMO3-224ENST00000540848 ITSN2Q9NZM3 1697 aa14.73□□□□□ -0.05
LMO3-224ENST00000540848 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
LMO3-224ENST00000540848 ABCA8O94911 1581 aa14.73□□□□□ -0.05
LMO3-224ENST00000540848 NAIPQ13075 1403 aa14.73□□□□□ -0.05
LMO3-224ENST00000540848 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
LMO3-224ENST00000540848 PTPRKQ15262 1439 aa14.72□□□□□ -0.05
LMO3-224ENST00000540848 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
LMO3-224ENST00000540848 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
LMO3-224ENST00000540848 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
LMO3-224ENST00000540848 PLB1Q6P1J6 1458 aa14.69□□□□□ -0.06
LMO3-224ENST00000540848 POTEMA6NI47 508 aa14.69□□□□□ -0.06
LMO3-224ENST00000540848 SLAIN1Q8ND83 568 aa14.69□□□□□ -0.06
LMO3-224ENST00000540848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.69□□□□□ -0.06
LMO3-224ENST00000540848 CHD1O14646 1710 aa14.69□□□□□ -0.06
LMO3-224ENST00000540848 SHROOM2Q13796 1616 aa14.69□□□□□ -0.06
LMO3-224ENST00000540848 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
LMO3-224ENST00000540848 DNMT1P26358 1616 aaKnown RBP14.68□□□□□ -0.06
LMO3-224ENST00000540848 POTEGQ6S5H5 508 aa14.68□□□□□ -0.06
LMO3-224ENST00000540848 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
LMO3-224ENST00000540848 DPY19L2Q6NUT2 758 aa14.65□□□□□ -0.06
LMO3-224ENST00000540848 KIF14Q15058 1648 aa14.64□□□□□ -0.07
LMO3-224ENST00000540848 DAPK1P53355 1430 aa14.64□□□□□ -0.07
LMO3-224ENST00000540848 RIOK3O14730 519 aaKnown RBP14.64□□□□□ -0.07
LMO3-224ENST00000540848 PTPRGP23470 1445 aa14.62□□□□□ -0.07
LMO3-224ENST00000540848 GPATCH8Q9UKJ3 1502 aaKnown RBP14.61□□□□□ -0.07
LMO3-224ENST00000540848 ATP10BO94823 1461 aa14.61□□□□□ -0.07
LMO3-224ENST00000540848 PLEKHD1A6NEE1 506 aa14.6□□□□□ -0.07
LMO3-224ENST00000540848 CAMSAP2Q08AD1 1489 aa14.6□□□□□ -0.07
LMO3-224ENST00000540848 EFCAB3Q8N7B9 438 aa14.6□□□□□ -0.07
LMO3-224ENST00000540848 ABCC5O15440 1437 aa14.59□□□□□ -0.07
LMO3-224ENST00000540848 ADGBQ8N7X0 1667 aa14.59□□□□□ -0.07
LMO3-224ENST00000540848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.58□□□□□ -0.08
LMO3-224ENST00000540848 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
LMO3-224ENST00000540848 ZFP91Q96JP5 570 aaPredicted RBP14.58□□□□□ -0.08
LMO3-224ENST00000540848 ADGRL2O95490 1459 aa14.58□□□□□ -0.08
LMO3-224ENST00000540848 ABCC10Q5T3U5 1492 aa14.58□□□□□ -0.08
LMO3-224ENST00000540848 CROCC2H7BZ55 1655 aa14.57□□□□□ -0.08
LMO3-224ENST00000540848 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
LMO3-224ENST00000540848 CFDP1Q9UEE9 299 aaPredicted RBP14.57□□□□□ -0.08
LMO3-224ENST00000540848 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
LMO3-224ENST00000540848 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
LMO3-224ENST00000540848 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
LMO3-224ENST00000540848 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
LMO3-224ENST00000540848 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
LMO3-224ENST00000540848 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
LMO3-224ENST00000540848 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
LMO3-224ENST00000540848 PKD2Q13563 968 aa14.54□□□□□ -0.08
LMO3-224ENST00000540848 RRP7BPQ9NSQ0 103 aa14.54□□□□□ -0.08
LMO3-224ENST00000540848 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
LMO3-224ENST00000540848 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.08
LMO3-224ENST00000540848 SIN3AQ96ST3 1273 aa14.52□□□□□ -0.08
LMO3-224ENST00000540848 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.08
LMO3-224ENST00000540848 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.09
LMO3-224ENST00000540848 ST18O60284 1047 aa14.51□□□□□ -0.09
LMO3-224ENST00000540848 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
LMO3-224ENST00000540848 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
LMO3-224ENST00000540848 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
LMO3-224ENST00000540848 NCOA1Q15788 1441 aa14.5□□□□□ -0.09
LMO3-224ENST00000540848 C3orf67Q6ZVT6 689 aa14.5□□□□□ -0.09
LMO3-224ENST00000540848 KDM6BO15054 1643 aa14.49□□□□□ -0.09
LMO3-224ENST00000540848 PREX2Q70Z35 1606 aa14.49□□□□□ -0.09
LMO3-224ENST00000540848 RSPH4AQ5TD94 716 aa14.48□□□□□ -0.09
LMO3-224ENST00000540848 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
LMO3-224ENST00000540848 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
LMO3-224ENST00000540848 BOLA1Q9Y3E2 137 aa14.47□□□□□ -0.09
LMO3-224ENST00000540848 ECM2O94769 699 aaPredicted RBP14.47□□□□□ -0.09
LMO3-224ENST00000540848 MPHOSPH9Q99550 1183 aa14.47□□□□□ -0.09
LMO3-224ENST00000540848 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
LMO3-224ENST00000540848 DENND4BO75064 1496 aaPredicted RBP14.46□□□□□ -0.1
LMO3-224ENST00000540848 PLEKHH2Q8IVE3 1493 aa14.45□□□□□ -0.1
LMO3-224ENST00000540848 C9orf84Q5VXU9 1444 aa14.44□□□□□ -0.1
LMO3-224ENST00000540848 RGL2O15211 777 aa14.43□□□□□ -0.1
LMO3-224ENST00000540848 TMEM121BQ9BXQ6 578 aaPredicted RBP14.43□□□□□ -0.1
LMO3-224ENST00000540848 CDC42BPBQ9Y5S2 1711 aa14.43□□□□□ -0.1
LMO3-224ENST00000540848 CCDC141Q6ZP82 1450 aa14.42□□□□□ -0.1
LMO3-224ENST00000540848 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
LMO3-224ENST00000540848 KDM5BQ9UGL1 1544 aa14.42□□□□□ -0.1
LMO3-224ENST00000540848 ANKRD30BQ9BXX2 1392 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms