RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
SOX9-AS1-214ENST00000540802 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
SOX9-AS1-214ENST00000540802 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
SOX9-AS1-214ENST00000540802 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
SOX9-AS1-214ENST00000540802 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
SOX9-AS1-214ENST00000540802 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
SOX9-AS1-214ENST00000540802 COL9A1P20849 921 aa11.12□□□□□ -0.63
SOX9-AS1-214ENST00000540802 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
SOX9-AS1-214ENST00000540802 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
SOX9-AS1-214ENST00000540802 NBR1Q14596 966 aa11.1□□□□□ -0.63
SOX9-AS1-214ENST00000540802 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-214ENST00000540802 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-214ENST00000540802 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
SOX9-AS1-214ENST00000540802 OSBPP22059 807 aa11.07□□□□□ -0.64
SOX9-AS1-214ENST00000540802 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-214ENST00000540802 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
SOX9-AS1-214ENST00000540802 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
SOX9-AS1-214ENST00000540802 MAP3K7O43318 606 aa11.04□□□□□ -0.64
SOX9-AS1-214ENST00000540802 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
SOX9-AS1-214ENST00000540802 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
SOX9-AS1-214ENST00000540802 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
SOX9-AS1-214ENST00000540802 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
SOX9-AS1-214ENST00000540802 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
SOX9-AS1-214ENST00000540802 NBPF3Q9H094 633 aa11□□□□□ -0.65
SOX9-AS1-214ENST00000540802 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
SOX9-AS1-214ENST00000540802 MLLT3P42568 568 aaPredicted RBP10.99□□□□□ -0.65
SOX9-AS1-214ENST00000540802 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
SOX9-AS1-214ENST00000540802 KIAA1468Q9P260 1216 aa10.99□□□□□ -0.65
SOX9-AS1-214ENST00000540802 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
SOX9-AS1-214ENST00000540802 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
SOX9-AS1-214ENST00000540802 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
SOX9-AS1-214ENST00000540802 KCTD12Q96CX2 325 aaKnown RBP10.97□□□□□ -0.65
SOX9-AS1-214ENST00000540802 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
SOX9-AS1-214ENST00000540802 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
SOX9-AS1-214ENST00000540802 SEMA3EO15041 775 aa10.94□□□□□ -0.66
SOX9-AS1-214ENST00000540802 PRSS12P56730 875 aa10.94□□□□□ -0.66
SOX9-AS1-214ENST00000540802 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
SOX9-AS1-214ENST00000540802 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
SOX9-AS1-214ENST00000540802 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
SOX9-AS1-214ENST00000540802 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
SOX9-AS1-214ENST00000540802 WNT2BQ93097 391 aa10.92□□□□□ -0.66
SOX9-AS1-214ENST00000540802 THSD4Q6ZMP0 1018 aa10.91□□□□□ -0.66
SOX9-AS1-214ENST00000540802 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
SOX9-AS1-214ENST00000540802 FAM198AQ9UFP1 575 aa10.91□□□□□ -0.66
SOX9-AS1-214ENST00000540802 RBM27Q9P2N5 1060 aaKnown RBP10.9□□□□□ -0.66
SOX9-AS1-214ENST00000540802 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
SOX9-AS1-214ENST00000540802 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
SOX9-AS1-214ENST00000540802 FAM98CQ17RN3 349 aaKnown RBP10.88□□□□□ -0.67
SOX9-AS1-214ENST00000540802 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
SOX9-AS1-214ENST00000540802 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
SOX9-AS1-214ENST00000540802 PTPN5P54829 565 aa10.86□□□□□ -0.67
SOX9-AS1-214ENST00000540802 ANKK1Q8NFD2 765 aa10.86□□□□□ -0.67
SOX9-AS1-214ENST00000540802 C3orf80F5H4A9 247 aa10.85□□□□□ -0.67
SOX9-AS1-214ENST00000540802 PTGDRQ13258 359 aa10.84□□□□□ -0.67
SOX9-AS1-214ENST00000540802 TATDN2Q93075 761 aa10.84□□□□□ -0.67
SOX9-AS1-214ENST00000540802 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
SOX9-AS1-214ENST00000540802 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
SOX9-AS1-214ENST00000540802 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
SOX9-AS1-214ENST00000540802 SMAPO00193 183 aa10.81□□□□□ -0.68
SOX9-AS1-214ENST00000540802 SMYD5Q6GMV2 418 aa10.81□□□□□ -0.68
SOX9-AS1-214ENST00000540802 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
SOX9-AS1-214ENST00000540802 NUTM2FA1L443 756 aa10.8□□□□□ -0.68
SOX9-AS1-214ENST00000540802 BCAMP50895 628 aa10.8□□□□□ -0.68
SOX9-AS1-214ENST00000540802 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
SOX9-AS1-214ENST00000540802 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
SOX9-AS1-214ENST00000540802 RBM26Q5T8P6 1007 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-214ENST00000540802 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-214ENST00000540802 FCHSD2O94868 740 aa10.76□□□□□ -0.69
SOX9-AS1-214ENST00000540802 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
SOX9-AS1-214ENST00000540802 EYA1Q99502 592 aa10.76□□□□□ -0.69
SOX9-AS1-214ENST00000540802 NYAP1Q6ZVC0 841 aa10.74□□□□□ -0.69
SOX9-AS1-214ENST00000540802 SAMD7Q7Z3H4 446 aa10.74□□□□□ -0.69
SOX9-AS1-214ENST00000540802 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
SOX9-AS1-214ENST00000540802 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
SOX9-AS1-214ENST00000540802 HPS5Q9UPZ3 1129 aa10.72□□□□□ -0.69
SOX9-AS1-214ENST00000540802 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
SOX9-AS1-214ENST00000540802 ADGRG1Q9Y653 693 aa10.71□□□□□ -0.69
SOX9-AS1-214ENST00000540802 GPR37O15354 613 aa10.7□□□□□ -0.7
SOX9-AS1-214ENST00000540802 HIC1Q14526 733 aa10.7□□□□□ -0.7
SOX9-AS1-214ENST00000540802 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-214ENST00000540802 PPP4CP60510 307 aa10.68□□□□□ -0.7
SOX9-AS1-214ENST00000540802 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
SOX9-AS1-214ENST00000540802 RBM46Q8TBY0 533 aaKnown RBP10.67□□□□□ -0.7
SOX9-AS1-214ENST00000540802 ITGBL1O95965 494 aaPredicted RBP10.66□□□□□ -0.7
SOX9-AS1-214ENST00000540802 GNPATO15228 680 aa10.65□□□□□ -0.7
SOX9-AS1-214ENST00000540802 FAM161AQ3B820 660 aa10.65□□□□□ -0.7
SOX9-AS1-214ENST00000540802 FECHP22830 423 aa10.64□□□□□ -0.71
SOX9-AS1-214ENST00000540802 OATP04181 439 aa10.63□□□□□ -0.71
SOX9-AS1-214ENST00000540802 DNAJB2P25686 324 aa10.63□□□□□ -0.71
SOX9-AS1-214ENST00000540802 GPIHBP1Q8IV16 184 aa10.62□□□□□ -0.71
SOX9-AS1-214ENST00000540802 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
SOX9-AS1-214ENST00000540802 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
SOX9-AS1-214ENST00000540802 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
SOX9-AS1-214ENST00000540802 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
SOX9-AS1-214ENST00000540802 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
SOX9-AS1-214ENST00000540802 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
SOX9-AS1-214ENST00000540802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
SOX9-AS1-214ENST00000540802 RNF40O75150 1001 aa10.58□□□□□ -0.72
SOX9-AS1-214ENST00000540802 KCNC4Q03721 635 aa10.58□□□□□ -0.72
SOX9-AS1-214ENST00000540802 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms