RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 RPRD2Q5VT52 1461 aaKnown RBP12.99□□□□□ -0.33
PHC1-208ENST00000540574 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
PHC1-208ENST00000540574 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
PHC1-208ENST00000540574 ARXQ96QS3 562 aa12.97□□□□□ -0.33
PHC1-208ENST00000540574 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
PHC1-208ENST00000540574 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
PHC1-208ENST00000540574 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
PHC1-208ENST00000540574 ROCK1Q13464 1354 aa12.97□□□□□ -0.33
PHC1-208ENST00000540574 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.33
PHC1-208ENST00000540574 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
PHC1-208ENST00000540574 MSH5O43196 834 aa12.96□□□□□ -0.33
PHC1-208ENST00000540574 ARHGAP5Q13017 1502 aa12.96□□□□□ -0.33
PHC1-208ENST00000540574 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.34
PHC1-208ENST00000540574 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.34
PHC1-208ENST00000540574 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.34
PHC1-208ENST00000540574 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
PHC1-208ENST00000540574 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
PHC1-208ENST00000540574 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
PHC1-208ENST00000540574 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
PHC1-208ENST00000540574 MORC1Q86VD1 984 aa12.94□□□□□ -0.34
PHC1-208ENST00000540574 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
PHC1-208ENST00000540574 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
PHC1-208ENST00000540574 APAF1O14727 1248 aa12.94□□□□□ -0.34
PHC1-208ENST00000540574 ERICH6BQ5W0A0 696 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 WDR62O43379 1518 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 CLUAP1Q96AJ1 413 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 KANK1Q14678 1352 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 DISP1Q96F81 1524 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 SAMD9Q5K651 1589 aa12.93□□□□□ -0.34
PHC1-208ENST00000540574 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
PHC1-208ENST00000540574 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
PHC1-208ENST00000540574 ATP10BO94823 1461 aa12.9□□□□□ -0.34
PHC1-208ENST00000540574 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
PHC1-208ENST00000540574 ESF1Q9H501 851 aaKnown RBP12.9□□□□□ -0.34
PHC1-208ENST00000540574 POGKQ9P215 609 aa12.9□□□□□ -0.34
PHC1-208ENST00000540574 RAPGEF6Q8TEU7 1601 aa12.9□□□□□ -0.34
PHC1-208ENST00000540574 NEFMP07197 916 aa12.89□□□□□ -0.35
PHC1-208ENST00000540574 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
PHC1-208ENST00000540574 SOX12O15370 315 aa12.89□□□□□ -0.35
PHC1-208ENST00000540574 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
PHC1-208ENST00000540574 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
PHC1-208ENST00000540574 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
PHC1-208ENST00000540574 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
PHC1-208ENST00000540574 KIAA0556O60303 1618 aa12.88□□□□□ -0.35
PHC1-208ENST00000540574 U2AF1L5P0DN76 240 aaPredicted RBP12.88□□□□□ -0.35
PHC1-208ENST00000540574 DEKP35659 375 aaKnown RBP12.88□□□□□ -0.35
PHC1-208ENST00000540574 U2AF1Q01081 240 aaKnown RBP eCLIP12.88□□□□□ -0.35
PHC1-208ENST00000540574 PLEKHH2Q8IVE3 1493 aa12.87□□□□□ -0.35
PHC1-208ENST00000540574 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
PHC1-208ENST00000540574 PZPP20742 1482 aa12.86□□□□□ -0.35
PHC1-208ENST00000540574 PDE4AP27815 886 aa12.86□□□□□ -0.35
PHC1-208ENST00000540574 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
PHC1-208ENST00000540574 KIF14Q15058 1648 aa12.85□□□□□ -0.35
PHC1-208ENST00000540574 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
PHC1-208ENST00000540574 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
PHC1-208ENST00000540574 IPO9Q96P70 1041 aaKnown RBP12.84□□□□□ -0.35
PHC1-208ENST00000540574 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
PHC1-208ENST00000540574 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
PHC1-208ENST00000540574 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
PHC1-208ENST00000540574 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
PHC1-208ENST00000540574 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
PHC1-208ENST00000540574 DISP3Q9P2K9 1392 aa12.83□□□□□ -0.36
PHC1-208ENST00000540574 FANCIQ9NVI1 1328 aa12.83□□□□□ -0.36
PHC1-208ENST00000540574 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
PHC1-208ENST00000540574 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
PHC1-208ENST00000540574 CYB5RLQ6IPT4 315 aa12.83□□□□□ -0.36
PHC1-208ENST00000540574 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
PHC1-208ENST00000540574 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
PHC1-208ENST00000540574 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
PHC1-208ENST00000540574 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
PHC1-208ENST00000540574 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
PHC1-208ENST00000540574 TEX14Q8IWB6 1497 aa12.81□□□□□ -0.36
PHC1-208ENST00000540574 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
PHC1-208ENST00000540574 LRRIQ1Q96JM4 1722 aa12.81□□□□□ -0.36
PHC1-208ENST00000540574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
PHC1-208ENST00000540574 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
PHC1-208ENST00000540574 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
PHC1-208ENST00000540574 DHX29Q7Z478 1369 aaKnown RBP12.8□□□□□ -0.36
PHC1-208ENST00000540574 BCAR3O75815 825 aa12.8□□□□□ -0.36
PHC1-208ENST00000540574 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
PHC1-208ENST00000540574 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
PHC1-208ENST00000540574 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
PHC1-208ENST00000540574 ERBINQ96RT1 1412 aa12.78□□□□□ -0.36
PHC1-208ENST00000540574 DNMT1P26358 1616 aaKnown RBP12.78□□□□□ -0.36
PHC1-208ENST00000540574 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
PHC1-208ENST00000540574 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
PHC1-208ENST00000540574 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.37
PHC1-208ENST00000540574 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.37
PHC1-208ENST00000540574 GGNBP2Q9H3C7 697 aa12.77□□□□□ -0.37
PHC1-208ENST00000540574 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
PHC1-208ENST00000540574 CEP170Q5SW79 1584 aa12.76□□□□□ -0.37
PHC1-208ENST00000540574 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
PHC1-208ENST00000540574 SLKQ9H2G2 1235 aaPredicted RBP12.76□□□□□ -0.37
PHC1-208ENST00000540574 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
PHC1-208ENST00000540574 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
PHC1-208ENST00000540574 TESK2Q96S53 571 aa12.75□□□□□ -0.37
PHC1-208ENST00000540574 MTHFSP49914 203 aa12.75□□□□□ -0.37
PHC1-208ENST00000540574 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
PHC1-208ENST00000540574 C14orf37Q86TY3 774 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms