RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 GPATCH8Q9UKJ3 1502 aaKnown RBP14.98□□□□□ -0.01
CPT1A-206ENST00000540367 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
CPT1A-206ENST00000540367 CARD11Q9BXL7 1154 aa14.97□□□□□ -0.01
CPT1A-206ENST00000540367 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
CPT1A-206ENST00000540367 EXOC6Q8TAG9 804 aa14.97□□□□□ -0.01
CPT1A-206ENST00000540367 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
CPT1A-206ENST00000540367 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
CPT1A-206ENST00000540367 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
CPT1A-206ENST00000540367 MS4A1P11836 297 aa14.93□□□□□ -0.02
CPT1A-206ENST00000540367 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
CPT1A-206ENST00000540367 CARMIL2Q6F5E8 1435 aa14.93□□□□□ -0.02
CPT1A-206ENST00000540367 ST20-MTHFSA0A0A6YYL1 179 aa14.93□□□□□ -0.02
CPT1A-206ENST00000540367 PDE4AP27815 886 aa14.93□□□□□ -0.02
CPT1A-206ENST00000540367 SHANK2Q9UPX8 1470 aa14.93□□□□□ -0.02
CPT1A-206ENST00000540367 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
CPT1A-206ENST00000540367 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
CPT1A-206ENST00000540367 BACH2Q9BYV9 841 aa14.92□□□□□ -0.02
CPT1A-206ENST00000540367 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
CPT1A-206ENST00000540367 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
CPT1A-206ENST00000540367 ATP10BO94823 1461 aa14.91□□□□□ -0.02
CPT1A-206ENST00000540367 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
CPT1A-206ENST00000540367 USP35Q9P2H5 1018 aa14.91□□□□□ -0.02
CPT1A-206ENST00000540367 NUP155O75694 1391 aa14.9□□□□□ -0.02
CPT1A-206ENST00000540367 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
CPT1A-206ENST00000540367 CHD1O14646 1710 aa14.89□□□□□ -0.03
CPT1A-206ENST00000540367 ZMYM4Q5VZL5 1548 aa14.88□□□□□ -0.03
CPT1A-206ENST00000540367 PTPRGP23470 1445 aa14.88□□□□□ -0.03
CPT1A-206ENST00000540367 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
CPT1A-206ENST00000540367 HNRNPMP52272 730 aaKnown RBP eCLIP14.88□□□□□ -0.03
CPT1A-206ENST00000540367 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
CPT1A-206ENST00000540367 SALL2Q9Y467 1007 aaPredicted RBP14.87□□□□□ -0.03
CPT1A-206ENST00000540367 INSRP06213 1382 aa14.87□□□□□ -0.03
CPT1A-206ENST00000540367 NEFMP07197 916 aa14.86□□□□□ -0.03
CPT1A-206ENST00000540367 LAS1LQ9Y4W2 734 aaKnown RBP14.86□□□□□ -0.03
CPT1A-206ENST00000540367 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
CPT1A-206ENST00000540367 DCAF11Q8TEB1 546 aa14.85□□□□□ -0.03
CPT1A-206ENST00000540367 ABCA8O94911 1581 aa14.85□□□□□ -0.03
CPT1A-206ENST00000540367 BLMP54132 1417 aaPredicted RBP14.85□□□□□ -0.03
CPT1A-206ENST00000540367 ABCC10Q5T3U5 1492 aa14.83□□□□□ -0.04
CPT1A-206ENST00000540367 PLEKHH2Q8IVE3 1493 aa14.83□□□□□ -0.04
CPT1A-206ENST00000540367 PRAG1Q86YV5 1406 aa14.82□□□□□ -0.04
CPT1A-206ENST00000540367 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
CPT1A-206ENST00000540367 LAMC1P11047 1609 aa14.82□□□□□ -0.04
CPT1A-206ENST00000540367 PER1O15534 1290 aaPredicted RBP14.82□□□□□ -0.04
CPT1A-206ENST00000540367 IL27Q8NEV9 243 aa14.82□□□□□ -0.04
CPT1A-206ENST00000540367 COL17A1Q9UMD9 1497 aaPredicted RBP14.82□□□□□ -0.04
CPT1A-206ENST00000540367 WASHC2CQ9Y4E1 1318 aa14.81□□□□□ -0.04
CPT1A-206ENST00000540367 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
CPT1A-206ENST00000540367 RGL3Q3MIN7 710 aa14.81□□□□□ -0.04
CPT1A-206ENST00000540367 DNAJC5Q9H3Z4 198 aa14.81□□□□□ -0.04
CPT1A-206ENST00000540367 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
CPT1A-206ENST00000540367 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
CPT1A-206ENST00000540367 GPRASP1Q5JY77 1395 aa14.79□□□□□ -0.04
CPT1A-206ENST00000540367 PLIN1O60240 522 aa14.78□□□□□ -0.04
CPT1A-206ENST00000540367 CRBNQ96SW2 442 aa14.78□□□□□ -0.04
CPT1A-206ENST00000540367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.043e-6■■□□□ 14
CPT1A-206ENST00000540367 PRDM15P57071 1507 aaPredicted RBP14.78□□□□□ -0.04
CPT1A-206ENST00000540367 TSPY4P0CV99 314 aa14.77□□□□□ -0.04
CPT1A-206ENST00000540367 TSPY10P0CW01 314 aa14.77□□□□□ -0.04
CPT1A-206ENST00000540367 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
CPT1A-206ENST00000540367 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
CPT1A-206ENST00000540367 ANO8Q9HCE9 1232 aaPredicted RBP14.75□□□□□ -0.05
CPT1A-206ENST00000540367 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
CPT1A-206ENST00000540367 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
CPT1A-206ENST00000540367 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
CPT1A-206ENST00000540367 A2MP01023 1474 aa14.74□□□□□ -0.05
CPT1A-206ENST00000540367 NBPF1Q3BBV0 1214 aa14.73□□□□□ -0.05
CPT1A-206ENST00000540367 CC2D1BQ5T0F9 858 aaKnown RBP14.73□□□□□ -0.05
CPT1A-206ENST00000540367 SKAP1Q86WV1 359 aa14.73□□□□□ -0.05
CPT1A-206ENST00000540367 MYO5CQ9NQX4 1742 aa14.73□□□□□ -0.05
CPT1A-206ENST00000540367 TESK2Q96S53 571 aa14.73□□□□□ -0.05
CPT1A-206ENST00000540367 CCDC141Q6ZP82 1450 aa14.73□□□□□ -0.05
CPT1A-206ENST00000540367 ERBINQ96RT1 1412 aa14.72□□□□□ -0.05
CPT1A-206ENST00000540367 UNC13BO14795 1591 aa14.72□□□□□ -0.05
CPT1A-206ENST00000540367 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
CPT1A-206ENST00000540367 SAMD9LQ8IVG5 1584 aa14.7□□□□□ -0.06
CPT1A-206ENST00000540367 PLA2R1Q13018 1463 aa14.7□□□□□ -0.06
CPT1A-206ENST00000540367 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
CPT1A-206ENST00000540367 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
CPT1A-206ENST00000540367 PANK3Q9H999 370 aa14.7□□□□□ -0.06
CPT1A-206ENST00000540367 GSE1Q14687 1217 aa14.7□□□□□ -0.06
CPT1A-206ENST00000540367 TTC37Q6PGP7 1564 aa14.7□□□□□ -0.06
CPT1A-206ENST00000540367 NFKBIBQ15653 356 aa14.69□□□□□ -0.06
CPT1A-206ENST00000540367 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
CPT1A-206ENST00000540367 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
CPT1A-206ENST00000540367 CDC42BPBQ9Y5S2 1711 aa14.68□□□□□ -0.06
CPT1A-206ENST00000540367 TMF1P82094 1093 aa14.67□□□□□ -0.06
CPT1A-206ENST00000540367 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
CPT1A-206ENST00000540367 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
CPT1A-206ENST00000540367 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
CPT1A-206ENST00000540367 CLASP1Q7Z460 1538 aa14.67□□□□□ -0.06
CPT1A-206ENST00000540367 IQGAP3Q86VI3 1631 aa14.66□□□□□ -0.06
CPT1A-206ENST00000540367 ADAMTS8Q9UP79 889 aa14.66□□□□□ -0.06
CPT1A-206ENST00000540367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
CPT1A-206ENST00000540367 DUSP27Q5VZP5 1158 aa14.66□□□□□ -0.06
CPT1A-206ENST00000540367 DAXXQ9UER7 740 aaPredicted RBP14.66□□□□□ -0.06
CPT1A-206ENST00000540367 PLEKHH1Q9ULM0 1364 aa14.66□□□□□ -0.06
CPT1A-206ENST00000540367 C8orf34Q49A92 452 aa14.65□□□□□ -0.06
CPT1A-206ENST00000540367 SYCP2Q9BX26 1530 aa14.65□□□□□ -0.06
CPT1A-206ENST00000540367 ZNF521Q96K83 1311 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms