RNA–Protein interactions for RNA: ENST00000540091.1

SPPL3-205, Transcript of signal peptide peptidase like 3, humanhuman

TSL 4

Gene SPPL3, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-205ENST00000540091 JPH4Q96JJ6 628 aa9.35□□□□□ -0.91
SPPL3-205ENST00000540091 PHF14O94880 888 aa9.34□□□□□ -0.91
SPPL3-205ENST00000540091 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
SPPL3-205ENST00000540091 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
SPPL3-205ENST00000540091 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
SPPL3-205ENST00000540091 WDR62O43379 1518 aa9.33□□□□□ -0.92
SPPL3-205ENST00000540091 POTEMA6NI47 508 aa9.33□□□□□ -0.92
SPPL3-205ENST00000540091 POTEGQ6S5H5 508 aa9.33□□□□□ -0.92
SPPL3-205ENST00000540091 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
SPPL3-205ENST00000540091 EPAS1Q99814 870 aa9.33□□□□□ -0.92
SPPL3-205ENST00000540091 CFTRP13569 1480 aa9.33□□□□□ -0.92
SPPL3-205ENST00000540091 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
SPPL3-205ENST00000540091 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
SPPL3-205ENST00000540091 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
SPPL3-205ENST00000540091 HS3ST6Q96QI5 342 aa9.32□□□□□ -0.92
SPPL3-205ENST00000540091 FOSBP53539 338 aa9.31□□□□□ -0.92
SPPL3-205ENST00000540091 CEP164Q9UPV0 1460 aa9.31□□□□□ -0.92
SPPL3-205ENST00000540091 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
SPPL3-205ENST00000540091 DDX12PQ92771 950 aa9.3□□□□□ -0.92
SPPL3-205ENST00000540091 ZDHHC16Q969W1 377 aa9.3□□□□□ -0.92
SPPL3-205ENST00000540091 GRXCR2A6NFK2 248 aa9.29□□□□□ -0.92
SPPL3-205ENST00000540091 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
SPPL3-205ENST00000540091 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
SPPL3-205ENST00000540091 PBX2P40425 430 aa9.28□□□□□ -0.92
SPPL3-205ENST00000540091 PCDHGA10Q9Y5H3 936 aa9.28□□□□□ -0.92
SPPL3-205ENST00000540091 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
SPPL3-205ENST00000540091 SEMA3EO15041 775 aa9.27□□□□□ -0.93
SPPL3-205ENST00000540091 PCDH10Q9P2E7 1040 aa9.27□□□□□ -0.93
SPPL3-205ENST00000540091 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
SPPL3-205ENST00000540091 BCANQ96GW7 911 aa9.25□□□□□ -0.93
SPPL3-205ENST00000540091 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
SPPL3-205ENST00000540091 PTPREP23469 700 aa9.24□□□□□ -0.93
SPPL3-205ENST00000540091 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
SPPL3-205ENST00000540091 MAP3K7O43318 606 aa9.23□□□□□ -0.93
SPPL3-205ENST00000540091 EN1Q05925 392 aaPredicted RBP9.23□□□□□ -0.93
SPPL3-205ENST00000540091 MLLT3P42568 568 aaPredicted RBP9.22□□□□□ -0.93
SPPL3-205ENST00000540091 CDAN1Q8IWY9 1227 aa9.22□□□□□ -0.93
SPPL3-205ENST00000540091 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
SPPL3-205ENST00000540091 OSBPP22059 807 aa9.21□□□□□ -0.94
SPPL3-205ENST00000540091 POTEBQ6S5H4 581 aa9.21□□□□□ -0.94
SPPL3-205ENST00000540091 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
SPPL3-205ENST00000540091 CERKQ8TCT0 537 aa9.2□□□□□ -0.94
SPPL3-205ENST00000540091 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
SPPL3-205ENST00000540091 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
SPPL3-205ENST00000540091 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
SPPL3-205ENST00000540091 KCNK17Q96T54 332 aa9.19□□□□□ -0.94
SPPL3-205ENST00000540091 URB2Q14146 1524 aaKnown RBP9.19□□□□□ -0.94
SPPL3-205ENST00000540091 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
SPPL3-205ENST00000540091 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
SPPL3-205ENST00000540091 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
SPPL3-205ENST00000540091 TK2O00142 265 aa9.14□□□□□ -0.95
SPPL3-205ENST00000540091 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPPL3-205ENST00000540091 SLC4A5Q9BY07 1137 aa9.14□□□□□ -0.95
SPPL3-205ENST00000540091 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
SPPL3-205ENST00000540091 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
SPPL3-205ENST00000540091 PSEN2P49810 448 aa9.13□□□□□ -0.95
SPPL3-205ENST00000540091 TSR1Q2NL82 804 aaKnown RBP9.12□□□□□ -0.95
SPPL3-205ENST00000540091 POTEEQ6S8J3 1075 aa9.12□□□□□ -0.95
SPPL3-205ENST00000540091 DNMBPQ6XZF7 1577 aa9.12□□□□□ -0.95
SPPL3-205ENST00000540091 TOPBP1Q92547 1522 aa9.11□□□□□ -0.95
SPPL3-205ENST00000540091 ONECUT3O60422 494 aaPredicted RBP9.11□□□□□ -0.95
SPPL3-205ENST00000540091 PRIM1P49642 420 aaKnown RBP9.11□□□□□ -0.95
SPPL3-205ENST00000540091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPPL3-205ENST00000540091 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
SPPL3-205ENST00000540091 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
SPPL3-205ENST00000540091 FCHSD2O94868 740 aa9.1□□□□□ -0.95
SPPL3-205ENST00000540091 RBM26Q5T8P6 1007 aaKnown RBP9.1□□□□□ -0.95
SPPL3-205ENST00000540091 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
SPPL3-205ENST00000540091 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
SPPL3-205ENST00000540091 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
SPPL3-205ENST00000540091 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
SPPL3-205ENST00000540091 LMOD2Q6P5Q4 547 aa9.09□□□□□ -0.95
SPPL3-205ENST00000540091 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
SPPL3-205ENST00000540091 COL9A1P20849 921 aa9.08□□□□□ -0.96
SPPL3-205ENST00000540091 PTGDRQ13258 359 aa9.08□□□□□ -0.96
SPPL3-205ENST00000540091 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
SPPL3-205ENST00000540091 PRSS12P56730 875 aa9.07□□□□□ -0.96
SPPL3-205ENST00000540091 HIC1Q14526 733 aa9.07□□□□□ -0.96
SPPL3-205ENST00000540091 ADGRD1Q6QNK2 874 aa9.07□□□□□ -0.96
SPPL3-205ENST00000540091 CDHR5Q9HBB8 845 aa9.07□□□□□ -0.96
SPPL3-205ENST00000540091 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
SPPL3-205ENST00000540091 TRIM6-TRIM34B2RNG4 842 aa9.06□□□□□ -0.96
SPPL3-205ENST00000540091 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
SPPL3-205ENST00000540091 NBPF3Q9H094 633 aa9.06□□□□□ -0.96
SPPL3-205ENST00000540091 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
SPPL3-205ENST00000540091 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
SPPL3-205ENST00000540091 CDCA7LQ96GN5 454 aa9.05□□□□□ -0.96
SPPL3-205ENST00000540091 NPDC1Q9NQX5 325 aaPredicted RBP9.05□□□□□ -0.96
SPPL3-205ENST00000540091 EIF4G3O43432 1585 aaKnown RBP9.04□□□□□ -0.96
SPPL3-205ENST00000540091 TARBP1Q13395 1621 aaKnown RBP9.04□□□□□ -0.96
SPPL3-205ENST00000540091 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
SPPL3-205ENST00000540091 GNPATO15228 680 aa9.03□□□□□ -0.96
SPPL3-205ENST00000540091 PLSCR2Q9NRY7 297 aa9.03□□□□□ -0.96
SPPL3-205ENST00000540091 POLA1P09884 1462 aaPredicted RBP9.02□□□□□ -0.96
SPPL3-205ENST00000540091 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
SPPL3-205ENST00000540091 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
SPPL3-205ENST00000540091 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
SPPL3-205ENST00000540091 HRO43593 1189 aa9□□□□□ -0.97
SPPL3-205ENST00000540091 PADI6Q6TGC4 694 aa9□□□□□ -0.97
SPPL3-205ENST00000540091 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms