RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
NOVA1-206ENST00000539517 NUTM2DQ5VT03 806 aaPredicted RBP8.51□□□□□ -1.05
NOVA1-206ENST00000539517 RSPH4AQ5TD94 716 aa8.51□□□□□ -1.05
NOVA1-206ENST00000539517 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
NOVA1-206ENST00000539517 CDC42BPAQ5VT25 1732 aa8.51□□□□□ -1.05
NOVA1-206ENST00000539517 CCDC141Q6ZP82 1450 aa8.5□□□□□ -1.05
NOVA1-206ENST00000539517 RPRD2Q5VT52 1461 aaKnown RBP8.49□□□□□ -1.05
NOVA1-206ENST00000539517 KIF7Q2M1P5 1343 aa8.49□□□□□ -1.05
NOVA1-206ENST00000539517 SAMD9LQ8IVG5 1584 aa8.49□□□□□ -1.05
NOVA1-206ENST00000539517 PLCH2O75038 1416 aa8.49□□□□□ -1.05
NOVA1-206ENST00000539517 ASXL2Q76L83 1435 aa8.49□□□□□ -1.05
NOVA1-206ENST00000539517 HNRNPUQ00839 825 aaKnown RBP eCLIP8.48□□□□□ -1.05
NOVA1-206ENST00000539517 REREQ9P2R6 1566 aa8.48□□□□□ -1.05
NOVA1-206ENST00000539517 GCC2Q8IWJ2 1684 aa8.47□□□□□ -1.05
NOVA1-206ENST00000539517 ZBTB22O15209 634 aa8.47□□□□□ -1.05
NOVA1-206ENST00000539517 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
NOVA1-206ENST00000539517 USP47Q96K76 1375 aa8.46□□□□□ -1.05
NOVA1-206ENST00000539517 ITSN2Q9NZM3 1697 aa8.46□□□□□ -1.05
NOVA1-206ENST00000539517 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.05
NOVA1-206ENST00000539517 IRX6P78412 446 aaPredicted RBP8.46□□□□□ -1.05
NOVA1-206ENST00000539517 MLECQ14165 292 aa8.46□□□□□ -1.05
NOVA1-206ENST00000539517 MRS2Q9HD23 443 aa8.46□□□□□ -1.05
NOVA1-206ENST00000539517 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.06
NOVA1-206ENST00000539517 ABCA9Q8IUA7 1624 aa8.46□□□□□ -1.06
NOVA1-206ENST00000539517 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
NOVA1-206ENST00000539517 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
NOVA1-206ENST00000539517 FANCAO15360 1455 aa8.45□□□□□ -1.06
NOVA1-206ENST00000539517 ADGRL2O95490 1459 aa8.45□□□□□ -1.06
NOVA1-206ENST00000539517 ZCCHC11Q5TAX3 1644 aaKnown RBP8.45□□□□□ -1.06
NOVA1-206ENST00000539517 DIP2BQ9P265 1576 aa8.45□□□□□ -1.06
NOVA1-206ENST00000539517 TEX14Q8IWB6 1497 aa8.45□□□□□ -1.06
NOVA1-206ENST00000539517 CCDC7Q96M83 1385 aa8.44□□□□□ -1.06
NOVA1-206ENST00000539517 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
NOVA1-206ENST00000539517 PRKRIP1Q9H875 184 aaPredicted RBP8.43□□□□□ -1.06
NOVA1-206ENST00000539517 CD109Q6YHK3 1445 aa8.42□□□□□ -1.06
NOVA1-206ENST00000539517 ADGRL1O94910 1474 aa8.42□□□□□ -1.06
NOVA1-206ENST00000539517 CC2D1BQ5T0F9 858 aaKnown RBP8.42□□□□□ -1.06
NOVA1-206ENST00000539517 FAM135AQ9P2D6 1515 aa8.42□□□□□ -1.06
NOVA1-206ENST00000539517 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
NOVA1-206ENST00000539517 FKBP8Q14318 412 aa8.42□□□□□ -1.06
NOVA1-206ENST00000539517 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
NOVA1-206ENST00000539517 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
NOVA1-206ENST00000539517 SAFB2Q14151 953 aaKnown RBP eCLIP8.41□□□□□ -1.06
NOVA1-206ENST00000539517 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
NOVA1-206ENST00000539517 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
NOVA1-206ENST00000539517 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
NOVA1-206ENST00000539517 SHANK2Q9UPX8 1470 aa8.39□□□□□ -1.07
NOVA1-206ENST00000539517 CFAP65Q6ZU64 1925 aaKnown RBP8.39□□□□□ -1.07
NOVA1-206ENST00000539517 RNF216Q9NWF9 866 aaPredicted RBP8.39□□□□□ -1.07
NOVA1-206ENST00000539517 CCER2I3L3R5 266 aa8.39□□□□□ -1.07
NOVA1-206ENST00000539517 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
NOVA1-206ENST00000539517 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
NOVA1-206ENST00000539517 SUPT16HQ9Y5B9 1047 aaKnown RBP8.38□□□□□ -1.07
NOVA1-206ENST00000539517 ZMYM4Q5VZL5 1548 aa8.38□□□□□ -1.07
NOVA1-206ENST00000539517 SPATA31E1Q6ZUB1 1445 aa8.38□□□□□ -1.07
NOVA1-206ENST00000539517 TMC1Q8TDI8 760 aa8.37□□□□□ -1.07
NOVA1-206ENST00000539517 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
NOVA1-206ENST00000539517 MYO5CQ9NQX4 1742 aa8.37□□□□□ -1.07
NOVA1-206ENST00000539517 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
NOVA1-206ENST00000539517 RICTORQ6R327 1708 aa8.37□□□□□ -1.07
NOVA1-206ENST00000539517 FBXO31Q5XUX0 539 aaPredicted RBP8.36□□□□□ -1.07
NOVA1-206ENST00000539517 ADGBQ8N7X0 1667 aa8.36□□□□□ -1.07
NOVA1-206ENST00000539517 ARHGEF5Q12774 1597 aa8.36□□□□□ -1.07
NOVA1-206ENST00000539517 CROCC2H7BZ55 1655 aa8.36□□□□□ -1.07
NOVA1-206ENST00000539517 KANK1Q14678 1352 aa8.36□□□□□ -1.07
NOVA1-206ENST00000539517 PANK3Q9H999 370 aa8.36□□□□□ -1.07
NOVA1-206ENST00000539517 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
NOVA1-206ENST00000539517 STK26Q9P289 416 aa8.35□□□□□ -1.07
NOVA1-206ENST00000539517 DHX29Q7Z478 1369 aaKnown RBP8.35□□□□□ -1.07
NOVA1-206ENST00000539517 ABCC1P33527 1531 aa8.35□□□□□ -1.07
NOVA1-206ENST00000539517 FOXD4L1Q9NU39 408 aa8.35□□□□□ -1.07
NOVA1-206ENST00000539517 FRMPD1Q5SYB0 1578 aa8.34□□□□□ -1.07
NOVA1-206ENST00000539517 UGGT1Q9NYU2 1555 aa8.34□□□□□ -1.07
NOVA1-206ENST00000539517 TNNT2P45379 298 aaPredicted RBP8.34□□□□□ -1.07
NOVA1-206ENST00000539517 A2MP01023 1474 aa8.34□□□□□ -1.07
NOVA1-206ENST00000539517 DUOX2Q9NRD8 1548 aa8.34□□□□□ -1.07
NOVA1-206ENST00000539517 TESK2Q96S53 571 aa8.33□□□□□ -1.08
NOVA1-206ENST00000539517 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
NOVA1-206ENST00000539517 DISP3Q9P2K9 1392 aa8.33□□□□□ -1.08
NOVA1-206ENST00000539517 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
NOVA1-206ENST00000539517 PRAG1Q86YV5 1406 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 NEFLP07196 543 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 TRHP20396 242 aaPredicted RBP8.32□□□□□ -1.08
NOVA1-206ENST00000539517 MROH2AA6NES4 1674 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 TMF1P82094 1093 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 IDI1Q13907 227 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 ERBINQ96RT1 1412 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 YEATS2Q9ULM3 1422 aa8.32□□□□□ -1.08
NOVA1-206ENST00000539517 ATP7AQ04656 1500 aa8.31□□□□□ -1.08
NOVA1-206ENST00000539517 MAST1Q9Y2H9 1570 aa8.31□□□□□ -1.08
NOVA1-206ENST00000539517 DNAJC5Q9H3Z4 198 aa8.31□□□□□ -1.08
NOVA1-206ENST00000539517 KDM5AP29375 1690 aaKnown RBP8.31□□□□□ -1.08
NOVA1-206ENST00000539517 ZFYVE16Q7Z3T8 1539 aa8.3□□□□□ -1.08
NOVA1-206ENST00000539517 ATP10AO60312 1499 aa8.29□□□□□ -1.08
NOVA1-206ENST00000539517 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
NOVA1-206ENST00000539517 ZNF518AQ6AHZ1 1483 aa8.29□□□□□ -1.08
NOVA1-206ENST00000539517 KDM5CP41229 1560 aa8.29□□□□□ -1.08
NOVA1-206ENST00000539517 RALGAPBQ86X10 1494 aa8.28□□□□□ -1.08
NOVA1-206ENST00000539517 UHRF1BP1Q6BDS2 1440 aa8.28□□□□□ -1.08
NOVA1-206ENST00000539517 KNSTRNQ9Y448 316 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms