RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.87
PROM1-219ENST00000539194 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
PROM1-219ENST00000539194 ARAP3Q8WWN8 1544 aa9.64□□□□□ -0.87
PROM1-219ENST00000539194 ARID3CA6NKF2 412 aa9.64□□□□□ -0.87
PROM1-219ENST00000539194 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
PROM1-219ENST00000539194 A2MP01023 1474 aa9.64□□□□□ -0.87
PROM1-219ENST00000539194 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
PROM1-219ENST00000539194 EIF2AK4Q9P2K8 1649 aaKnown RBP9.64□□□□□ -0.87
PROM1-219ENST00000539194 ABCC1P33527 1531 aa9.64□□□□□ -0.87
PROM1-219ENST00000539194 MADDQ8WXG6 1647 aa9.63□□□□□ -0.87
PROM1-219ENST00000539194 MYOM1P52179 1685 aa9.63□□□□□ -0.87
PROM1-219ENST00000539194 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
PROM1-219ENST00000539194 IFT172Q9UG01 1749 aa9.63□□□□□ -0.87
PROM1-219ENST00000539194 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
PROM1-219ENST00000539194 PKD2Q13563 968 aa9.62□□□□□ -0.87
PROM1-219ENST00000539194 DUOX2Q9NRD8 1548 aa9.62□□□□□ -0.87
PROM1-219ENST00000539194 KIAA1210Q9ULL0 1709 aa9.62□□□□□ -0.87
PROM1-219ENST00000539194 HNRNPUQ00839 825 aaKnown RBP eCLIP9.61□□□□□ -0.87
PROM1-219ENST00000539194 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
PROM1-219ENST00000539194 COL17A1Q9UMD9 1497 aaPredicted RBP9.61□□□□□ -0.87
PROM1-219ENST00000539194 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
PROM1-219ENST00000539194 INSRP06213 1382 aa9.61□□□□□ -0.87
PROM1-219ENST00000539194 ABCA9Q8IUA7 1624 aa9.61□□□□□ -0.87
PROM1-219ENST00000539194 ERBINQ96RT1 1412 aa9.61□□□□□ -0.87
PROM1-219ENST00000539194 BCANQ96GW7 911 aa9.6□□□□□ -0.87
PROM1-219ENST00000539194 ANP32EQ9BTT0 268 aa9.6□□□□□ -0.87
PROM1-219ENST00000539194 INO80Q9ULG1 1556 aaPredicted RBP9.6□□□□□ -0.87
PROM1-219ENST00000539194 MROH1Q8NDA8 1641 aa9.6□□□□□ -0.87
PROM1-219ENST00000539194 MSH5O43196 834 aa9.6□□□□□ -0.87
PROM1-219ENST00000539194 NUP155O75694 1391 aa9.6□□□□□ -0.87
PROM1-219ENST00000539194 PARD3Q8TEW0 1356 aa9.59□□□□□ -0.87
PROM1-219ENST00000539194 FANCIQ9NVI1 1328 aa9.59□□□□□ -0.87
PROM1-219ENST00000539194 PNISRQ8TF01 805 aaKnown RBP9.59□□□□□ -0.87
PROM1-219ENST00000539194 ZFYVE16Q7Z3T8 1539 aa9.59□□□□□ -0.87
PROM1-219ENST00000539194 PLEKHH2Q8IVE3 1493 aa9.58□□□□□ -0.88
PROM1-219ENST00000539194 TRPM2O94759 1503 aa9.58□□□□□ -0.88
PROM1-219ENST00000539194 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
PROM1-219ENST00000539194 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
PROM1-219ENST00000539194 RSPH4AQ5TD94 716 aa9.57□□□□□ -0.88
PROM1-219ENST00000539194 TET3O43151 1660 aa9.56□□□□□ -0.88
PROM1-219ENST00000539194 PLCH2O75038 1416 aa9.56□□□□□ -0.88
PROM1-219ENST00000539194 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
PROM1-219ENST00000539194 PTPRTO14522 1441 aa9.56□□□□□ -0.88
PROM1-219ENST00000539194 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
PROM1-219ENST00000539194 BRD4O60885 1362 aaPredicted RBP9.56□□□□□ -0.88
PROM1-219ENST00000539194 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
PROM1-219ENST00000539194 BLMP54132 1417 aaPredicted RBP9.55□□□□□ -0.88
PROM1-219ENST00000539194 TESK2Q96S53 571 aa9.55□□□□□ -0.88
PROM1-219ENST00000539194 PPP4R2Q9NY27 417 aa9.55□□□□□ -0.88
PROM1-219ENST00000539194 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.88
PROM1-219ENST00000539194 MRS2Q9HD23 443 aa9.54□□□□□ -0.88
PROM1-219ENST00000539194 WDR7Q9Y4E6 1490 aa9.54□□□□□ -0.88
PROM1-219ENST00000539194 RTEL1-TNFRSF6BF6WH68 1400 aa9.54□□□□□ -0.88
PROM1-219ENST00000539194 ZC3H13Q5T200 1668 aaKnown RBP9.53□□□□□ -0.88
PROM1-219ENST00000539194 SYNMO15061 1565 aa9.53□□□□□ -0.88
PROM1-219ENST00000539194 NEFLP07196 543 aa9.53□□□□□ -0.88
PROM1-219ENST00000539194 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 MROH2AA6NES4 1674 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 ST20-MTHFSA0A0A6YYL1 179 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 CCDC144AA2RUR9 1427 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 NUDCQ9Y266 331 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 DISP3Q9P2K9 1392 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 NRXN1Q9ULB1 1477 aa9.51□□□□□ -0.89
PROM1-219ENST00000539194 TRAPPC8Q9Y2L5 1435 aa9.5□□□□□ -0.89
PROM1-219ENST00000539194 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
PROM1-219ENST00000539194 KIDINS220Q9ULH0 1771 aa9.5□□□□□ -0.89
PROM1-219ENST00000539194 FAM9BQ8IZU0 186 aa9.5□□□□□ -0.89
PROM1-219ENST00000539194 MYBBP1AQ9BQG0 1328 aaKnown RBP9.5□□□□□ -0.89
PROM1-219ENST00000539194 WASHC2CQ9Y4E1 1318 aa9.49□□□□□ -0.89
PROM1-219ENST00000539194 MAP3K4Q9Y6R4 1608 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
PROM1-219ENST00000539194 LMTK2Q8IWU2 1503 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 ABCA6Q8N139 1617 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 TSPY4P0CV99 314 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 TSPY10P0CW01 314 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 RALBP1Q15311 655 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 CARD11Q9BXL7 1154 aa9.48□□□□□ -0.89
PROM1-219ENST00000539194 PPRC1Q5VV67 1664 aaKnown RBP9.47□□□□□ -0.89
PROM1-219ENST00000539194 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
PROM1-219ENST00000539194 ATP7AQ04656 1500 aa9.46□□□□□ -0.89
PROM1-219ENST00000539194 MYOM2P54296 1465 aa9.46□□□□□ -0.89
PROM1-219ENST00000539194 DCAF11Q8TEB1 546 aa9.46□□□□□ -0.9
PROM1-219ENST00000539194 PPLO60437 1756 aa9.46□□□□□ -0.9
PROM1-219ENST00000539194 EFCAB6Q5THR3 1501 aa9.45□□□□□ -0.9
PROM1-219ENST00000539194 KIF1BO60333 1816 aa9.45□□□□□ -0.9
PROM1-219ENST00000539194 KDM5AP29375 1690 aaKnown RBP9.45□□□□□ -0.9
PROM1-219ENST00000539194 FBLN2P98095 1184 aa9.45□□□□□ -0.9
PROM1-219ENST00000539194 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
PROM1-219ENST00000539194 SETBP1Q9Y6X0 1596 aa9.44□□□□□ -0.9
PROM1-219ENST00000539194 FRMPD1Q5SYB0 1578 aa9.44□□□□□ -0.9
PROM1-219ENST00000539194 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
PROM1-219ENST00000539194 PIK3C2BO00750 1634 aa9.43□□□□□ -0.9
PROM1-219ENST00000539194 NPC1L1Q9UHC9 1359 aa9.43□□□□□ -0.9
PROM1-219ENST00000539194 ADGRB3O60242 1522 aa9.43□□□□□ -0.9
PROM1-219ENST00000539194 ZNF518AQ6AHZ1 1483 aa9.43□□□□□ -0.9
PROM1-219ENST00000539194 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
PROM1-219ENST00000539194 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
PROM1-219ENST00000539194 VIRMAQ69YN4 1812 aaKnown RBP9.42□□□□□ -0.9
PROM1-219ENST00000539194 SIGLEC1Q9BZZ2 1709 aa9.42□□□□□ -0.9
PROM1-219ENST00000539194 SCAF11Q99590 1463 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms