RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
KNTC1-210ENST00000539013 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
KNTC1-210ENST00000539013 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
KNTC1-210ENST00000539013 CADPS2Q86UW7 1296 aa9.21□□□□□ -0.94
KNTC1-210ENST00000539013 PCGF6Q9BYE7 350 aa9.21□□□□□ -0.94
KNTC1-210ENST00000539013 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.94
KNTC1-210ENST00000539013 PTPREP23469 700 aa9.2□□□□□ -0.94
KNTC1-210ENST00000539013 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
KNTC1-210ENST00000539013 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
KNTC1-210ENST00000539013 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
KNTC1-210ENST00000539013 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
KNTC1-210ENST00000539013 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
KNTC1-210ENST00000539013 CAMK2BQ13554 666 aa9.18□□□□□ -0.94
KNTC1-210ENST00000539013 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
KNTC1-210ENST00000539013 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
KNTC1-210ENST00000539013 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
KNTC1-210ENST00000539013 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
KNTC1-210ENST00000539013 EEA1Q15075 1411 aa9.14□□□□□ -0.95
KNTC1-210ENST00000539013 PHF14O94880 888 aa9.13□□□□□ -0.95
KNTC1-210ENST00000539013 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
KNTC1-210ENST00000539013 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
KNTC1-210ENST00000539013 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
KNTC1-210ENST00000539013 ADAM33Q9BZ11 813 aa9.12□□□□□ -0.95
KNTC1-210ENST00000539013 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
KNTC1-210ENST00000539013 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
KNTC1-210ENST00000539013 TYW1BQ6NUM6 668 aa9.11□□□□□ -0.95
KNTC1-210ENST00000539013 FAM9AQ8IZU1 332 aaPredicted RBP9.11□□□□□ -0.95
KNTC1-210ENST00000539013 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
KNTC1-210ENST00000539013 EPAS1Q99814 870 aa9.1□□□□□ -0.95
KNTC1-210ENST00000539013 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
KNTC1-210ENST00000539013 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
KNTC1-210ENST00000539013 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
KNTC1-210ENST00000539013 BAZ1BQ9UIG0 1483 aaKnown RBP9.08□□□□□ -0.96
KNTC1-210ENST00000539013 DPYSL4O14531 572 aa9.07□□□□□ -0.96
KNTC1-210ENST00000539013 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
KNTC1-210ENST00000539013 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
KNTC1-210ENST00000539013 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
KNTC1-210ENST00000539013 SPDYE16A6NNV3 312 aaPredicted RBP9.05□□□□□ -0.96
KNTC1-210ENST00000539013 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
KNTC1-210ENST00000539013 ZEB1P37275 1124 aaPredicted RBP9.05□□□□□ -0.96
KNTC1-210ENST00000539013 HAP1P54257 671 aaPredicted RBP9.05□□□□□ -0.96
KNTC1-210ENST00000539013 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
KNTC1-210ENST00000539013 WRNQ14191 1432 aaPredicted RBP eCLIP9.05□□□□□ -0.96
KNTC1-210ENST00000539013 PDIA6Q15084 440 aa9.03□□□□□ -0.96
KNTC1-210ENST00000539013 WDR70Q9NW82 654 aa9.03□□□□□ -0.96
KNTC1-210ENST00000539013 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
KNTC1-210ENST00000539013 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
KNTC1-210ENST00000539013 HMGXB3Q12766 1538 aa9.02□□□□□ -0.97
KNTC1-210ENST00000539013 E2F4Q16254 413 aa9.02□□□□□ -0.97
KNTC1-210ENST00000539013 C6orf132Q5T0Z8 1188 aa9.01□□□□□ -0.97
KNTC1-210ENST00000539013 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
KNTC1-210ENST00000539013 WNT2BQ93097 391 aa9.01□□□□□ -0.97
KNTC1-210ENST00000539013 COL9A1P20849 921 aa9□□□□□ -0.97
KNTC1-210ENST00000539013 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
KNTC1-210ENST00000539013 NCAPD3P42695 1498 aa9□□□□□ -0.97
KNTC1-210ENST00000539013 SOGA1O94964 1423 aa8.99□□□□□ -0.97
KNTC1-210ENST00000539013 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
KNTC1-210ENST00000539013 GOLGA3Q08378 1498 aa8.99□□□□□ -0.97
KNTC1-210ENST00000539013 PTPN5P54829 565 aa8.98□□□□□ -0.97
KNTC1-210ENST00000539013 PROX2Q3B8N5 592 aa8.98□□□□□ -0.97
KNTC1-210ENST00000539013 EN1Q05925 392 aaPredicted RBP8.97□□□□□ -0.97
KNTC1-210ENST00000539013 IFFO2Q5TF58 517 aa8.97□□□□□ -0.97
KNTC1-210ENST00000539013 DDX12PQ92771 950 aa8.97□□□□□ -0.97
KNTC1-210ENST00000539013 CEP162Q5TB80 1403 aa8.97□□□□□ -0.97
KNTC1-210ENST00000539013 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.97
KNTC1-210ENST00000539013 KIF21BO75037 1637 aa8.96□□□□□ -0.98
KNTC1-210ENST00000539013 SYNJ1O43426 1573 aa8.95□□□□□ -0.98
KNTC1-210ENST00000539013 TRIM6-TRIM34B2RNG4 842 aa8.95□□□□□ -0.98
KNTC1-210ENST00000539013 NBR1Q14596 966 aa8.95□□□□□ -0.98
KNTC1-210ENST00000539013 ANKK1Q8NFD2 765 aa8.95□□□□□ -0.98
KNTC1-210ENST00000539013 RBM33Q96EV2 1170 aaKnown RBP8.94□□□□□ -0.98
KNTC1-210ENST00000539013 KIAA1468Q9P260 1216 aa8.94□□□□□ -0.98
KNTC1-210ENST00000539013 TOP2BQ02880 1626 aa8.94□□□□□ -0.98
KNTC1-210ENST00000539013 CERKQ8TCT0 537 aa8.93□□□□□ -0.98
KNTC1-210ENST00000539013 BIVM-ERCC5R4GMW8 1640 aa8.93□□□□□ -0.98
KNTC1-210ENST00000539013 MAP3K7O43318 606 aa8.92□□□□□ -0.98
KNTC1-210ENST00000539013 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
KNTC1-210ENST00000539013 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
KNTC1-210ENST00000539013 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
KNTC1-210ENST00000539013 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
KNTC1-210ENST00000539013 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
KNTC1-210ENST00000539013 SOWAHBA6NEL2 793 aa8.9□□□□□ -0.98
KNTC1-210ENST00000539013 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
KNTC1-210ENST00000539013 PACS2Q86VP3 889 aa8.9□□□□□ -0.98
KNTC1-210ENST00000539013 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
KNTC1-210ENST00000539013 RGS20O76081 388 aa8.88□□□□□ -0.99
KNTC1-210ENST00000539013 UBTFP17480 764 aaKnown RBP8.88□□□□□ -0.99
KNTC1-210ENST00000539013 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
KNTC1-210ENST00000539013 CFTRP13569 1480 aa8.88□□□□□ -0.99
KNTC1-210ENST00000539013 GRXCR2A6NFK2 248 aa8.86□□□□□ -0.99
KNTC1-210ENST00000539013 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
KNTC1-210ENST00000539013 BCAMP50895 628 aa8.85□□□□□ -0.99
KNTC1-210ENST00000539013 PRSS12P56730 875 aa8.85□□□□□ -0.99
KNTC1-210ENST00000539013 RBM27Q9P2N5 1060 aaKnown RBP8.85□□□□□ -0.99
KNTC1-210ENST00000539013 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
KNTC1-210ENST00000539013 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
KNTC1-210ENST00000539013 ITGBL1O95965 494 aaPredicted RBP8.84□□□□□ -0.99
KNTC1-210ENST00000539013 OSBPP22059 807 aa8.84□□□□□ -0.99
KNTC1-210ENST00000539013 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
KNTC1-210ENST00000539013 CDCA7LQ96GN5 454 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms