RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 PANK3Q9H999 370 aa8.71□□□□□ -1.02
SCAPER-203ENST00000538941 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
SCAPER-203ENST00000538941 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
SCAPER-203ENST00000538941 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.02
SCAPER-203ENST00000538941 MSNP26038 577 aaKnown RBP8.7□□□□□ -1.02
SCAPER-203ENST00000538941 CGNL1Q0VF96 1302 aa8.7□□□□□ -1.02
SCAPER-203ENST00000538941 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
SCAPER-203ENST00000538941 ANKRD30BQ9BXX2 1392 aa8.7□□□□□ -1.02
SCAPER-203ENST00000538941 CENPJQ9HC77 1338 aaPredicted RBP8.7□□□□□ -1.02
SCAPER-203ENST00000538941 NCLP19338 710 aaKnown RBP8.7□□□□□ -1.02
SCAPER-203ENST00000538941 RPRD2Q5VT52 1461 aaKnown RBP8.7□□□□□ -1.02
SCAPER-203ENST00000538941 HECW1Q76N89 1606 aa8.7□□□□□ -1.02
SCAPER-203ENST00000538941 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
SCAPER-203ENST00000538941 PTPRKQ15262 1439 aa8.69□□□□□ -1.02
SCAPER-203ENST00000538941 KIAA1107Q9UPP5 1409 aa8.69□□□□□ -1.02
SCAPER-203ENST00000538941 ROCK1Q13464 1354 aa8.69□□□□□ -1.02
SCAPER-203ENST00000538941 GAPVD1Q14C86 1478 aa8.69□□□□□ -1.02
SCAPER-203ENST00000538941 CCDC144AA2RUR9 1427 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 E9PSI1 815 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 CUL7Q14999 1698 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 DAPK1P53355 1430 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 CCDC146Q8IYE0 955 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 WASHC2CQ9Y4E1 1318 aa8.68□□□□□ -1.02
SCAPER-203ENST00000538941 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
SCAPER-203ENST00000538941 CHGAP10645 457 aaKnown RBP8.67□□□□□ -1.02
SCAPER-203ENST00000538941 TNNT2P45379 298 aaPredicted RBP8.67□□□□□ -1.02
SCAPER-203ENST00000538941 ZNF644Q9H582 1327 aaPredicted RBP8.67□□□□□ -1.02
SCAPER-203ENST00000538941 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
SCAPER-203ENST00000538941 PTMAP06454 111 aaKnown RBP8.66□□□□□ -1.02
SCAPER-203ENST00000538941 CHMP4BQ9H444 224 aaKnown RBP8.66□□□□□ -1.02
SCAPER-203ENST00000538941 NESP48681 1621 aa8.66□□□□□ -1.02
SCAPER-203ENST00000538941 RNF123Q5XPI4 1314 aa8.65□□□□□ -1.02
SCAPER-203ENST00000538941 PLEKHH2Q8IVE3 1493 aa8.65□□□□□ -1.02
SCAPER-203ENST00000538941 ANKRD50Q9ULJ7 1429 aa8.65□□□□□ -1.02
SCAPER-203ENST00000538941 NGEFQ8N5V2 710 aa8.65□□□□□ -1.02
SCAPER-203ENST00000538941 THOC2Q8NI27 1593 aaKnown RBP8.65□□□□□ -1.02
SCAPER-203ENST00000538941 ABCA10Q8WWZ4 1543 aa8.65□□□□□ -1.03
SCAPER-203ENST00000538941 A0A0U1RQG5 324 aaPredicted RBP8.65□□□□□ -1.03
SCAPER-203ENST00000538941 CHMP5Q9NZZ3 219 aa8.65□□□□□ -1.03
SCAPER-203ENST00000538941 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
SCAPER-203ENST00000538941 CASC1Q6TDU7 716 aa8.64□□□□□ -1.03
SCAPER-203ENST00000538941 MORC1Q86VD1 984 aa8.64□□□□□ -1.03
SCAPER-203ENST00000538941 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
SCAPER-203ENST00000538941 COG6Q9Y2V7 657 aa8.64□□□□□ -1.03
SCAPER-203ENST00000538941 CARMIL2Q6F5E8 1435 aa8.63□□□□□ -1.03
SCAPER-203ENST00000538941 DNTTIP2Q5QJE6 756 aaKnown RBP8.63□□□□□ -1.03
SCAPER-203ENST00000538941 MRE11P49959 708 aa8.63□□□□□ -1.03
SCAPER-203ENST00000538941 AAMPQ13685 434 aa8.63□□□□□ -1.03
SCAPER-203ENST00000538941 SKOR2Q2VWA4 1001 aaPredicted RBP8.63□□□□□ -1.03
SCAPER-203ENST00000538941 UGGT2Q9NYU1 1516 aa8.63□□□□□ -1.03
SCAPER-203ENST00000538941 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
SCAPER-203ENST00000538941 EPRSP07814 1512 aaKnown RBP8.63□□□□□ -1.03
SCAPER-203ENST00000538941 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
SCAPER-203ENST00000538941 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
SCAPER-203ENST00000538941 NPM1P06748 294 aaKnown RBP eCLIP8.62□□□□□ -1.03
SCAPER-203ENST00000538941 APAF1O14727 1248 aa8.62□□□□□ -1.03
SCAPER-203ENST00000538941 RSPH4AQ5TD94 716 aa8.62□□□□□ -1.03
SCAPER-203ENST00000538941 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
SCAPER-203ENST00000538941 PRDM2Q13029 1718 aa8.61□□□□□ -1.03
SCAPER-203ENST00000538941 GRIN2BQ13224 1484 aa8.61□□□□□ -1.03
SCAPER-203ENST00000538941 ITPRIPQ8IWB1 547 aa8.61□□□□□ -1.03
SCAPER-203ENST00000538941 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCAPER-203ENST00000538941 DHX29Q7Z478 1369 aaKnown RBP8.61□□□□□ -1.03
SCAPER-203ENST00000538941 SKAP1Q86WV1 359 aa8.6□□□□□ -1.03
SCAPER-203ENST00000538941 TCOF1Q13428 1488 aaKnown RBP8.6□□□□□ -1.03
SCAPER-203ENST00000538941 NINLQ9Y2I6 1382 aa8.6□□□□□ -1.03
SCAPER-203ENST00000538941 IPO8O15397 1037 aaKnown RBP8.6□□□□□ -1.03
SCAPER-203ENST00000538941 PDE4CQ08493 712 aa8.6□□□□□ -1.03
SCAPER-203ENST00000538941 ABCC5O15440 1437 aa8.6□□□□□ -1.03
SCAPER-203ENST00000538941 CTTNBP2Q8WZ74 1663 aa8.6□□□□□ -1.03
SCAPER-203ENST00000538941 CDK13Q14004 1512 aaKnown RBP8.6□□□□□ -1.03
SCAPER-203ENST00000538941 SNAPC4Q5SXM2 1469 aa8.6□□□□□ -1.03
SCAPER-203ENST00000538941 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
SCAPER-203ENST00000538941 POGKQ9P215 609 aa8.59□□□□□ -1.03
SCAPER-203ENST00000538941 TRAK2O60296 914 aa8.59□□□□□ -1.03
SCAPER-203ENST00000538941 PPP2R1AP30153 589 aa8.59□□□□□ -1.03
SCAPER-203ENST00000538941 C20orf194Q5TEA3 1177 aa8.58□□□□□ -1.04
SCAPER-203ENST00000538941 SMC4Q9NTJ3 1288 aa8.58□□□□□ -1.04
SCAPER-203ENST00000538941 C22orf23Q9BZE7 217 aa8.58□□□□□ -1.04
SCAPER-203ENST00000538941 ISY1Q9ULR0 285 aaKnown RBP8.58□□□□□ -1.04
SCAPER-203ENST00000538941 U2SURPO15042 1029 aaKnown RBP8.58□□□□□ -1.04
SCAPER-203ENST00000538941 RRP9O43818 475 aaKnown RBP8.58□□□□□ -1.04
SCAPER-203ENST00000538941 TPM2P07951 284 aa8.58□□□□□ -1.04
SCAPER-203ENST00000538941 ZKSCAN2Q63HK3 967 aa8.57□□□□□ -1.04
SCAPER-203ENST00000538941 PANK1Q8TE04 598 aa8.57□□□□□ -1.04
SCAPER-203ENST00000538941 CALD1Q05682 793 aaKnown RBP8.57□□□□□ -1.04
SCAPER-203ENST00000538941 KANK1Q14678 1352 aa8.57□□□□□ -1.04
SCAPER-203ENST00000538941 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
SCAPER-203ENST00000538941 LRPPRCP42704 1394 aaKnown RBP8.57□□□□□ -1.04
SCAPER-203ENST00000538941 ERBINQ96RT1 1412 aa8.57□□□□□ -1.04
SCAPER-203ENST00000538941 U2AF1L5P0DN76 240 aaPredicted RBP8.56□□□□□ -1.04
SCAPER-203ENST00000538941 U2AF1Q01081 240 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCAPER-203ENST00000538941 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.56□□□□□ -1.04
SCAPER-203ENST00000538941 GCC2Q8IWJ2 1684 aa8.56□□□□□ -1.04
SCAPER-203ENST00000538941 BCL2L13Q9BXK5 485 aa8.56□□□□□ -1.04
SCAPER-203ENST00000538941 TEX14Q8IWB6 1497 aa8.56□□□□□ -1.04
SCAPER-203ENST00000538941 WDR62O43379 1518 aa8.56□□□□□ -1.04
SCAPER-203ENST00000538941 OSCARQ8IYS5 282 aa8.56□□□□□ -1.04
SCAPER-203ENST00000538941 BCAR3O75815 825 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms