RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 GRXCR2A6NFK2 248 aa11.45□□□□□ -0.58
GCSHP4-201ENST00000538792 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
GCSHP4-201ENST00000538792 P3H3Q8IVL6 736 aa11.45□□□□□ -0.58
GCSHP4-201ENST00000538792 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
GCSHP4-201ENST00000538792 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
GCSHP4-201ENST00000538792 COL9A1P20849 921 aa11.43□□□□□ -0.58
GCSHP4-201ENST00000538792 MLLT3P42568 568 aaPredicted RBP11.42□□□□□ -0.58
GCSHP4-201ENST00000538792 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
GCSHP4-201ENST00000538792 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
GCSHP4-201ENST00000538792 TK2O00142 265 aa11.41□□□□□ -0.58
GCSHP4-201ENST00000538792 OSBPP22059 807 aa11.41□□□□□ -0.58
GCSHP4-201ENST00000538792 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
GCSHP4-201ENST00000538792 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
GCSHP4-201ENST00000538792 HRO43593 1189 aa11.4□□□□□ -0.58
GCSHP4-201ENST00000538792 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
GCSHP4-201ENST00000538792 VPS9D1Q9Y2B5 631 aa11.4□□□□□ -0.58
GCSHP4-201ENST00000538792 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
GCSHP4-201ENST00000538792 SEMA3EO15041 775 aa11.38□□□□□ -0.59
GCSHP4-201ENST00000538792 MAP3K7O43318 606 aa11.38□□□□□ -0.59
GCSHP4-201ENST00000538792 MYT1LQ9UL68 1186 aa11.38□□□□□ -0.59
GCSHP4-201ENST00000538792 SLC4A5Q9BY07 1137 aa11.37□□□□□ -0.59
GCSHP4-201ENST00000538792 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
GCSHP4-201ENST00000538792 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
GCSHP4-201ENST00000538792 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
GCSHP4-201ENST00000538792 BHMG1C9JSJ3 638 aaPredicted RBP11.32□□□□□ -0.6
GCSHP4-201ENST00000538792 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
GCSHP4-201ENST00000538792 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
GCSHP4-201ENST00000538792 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
GCSHP4-201ENST00000538792 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
GCSHP4-201ENST00000538792 RABGEF1Q9UJ41 708 aa11.26□□□□□ -0.61
GCSHP4-201ENST00000538792 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
GCSHP4-201ENST00000538792 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
GCSHP4-201ENST00000538792 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
GCSHP4-201ENST00000538792 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
GCSHP4-201ENST00000538792 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
GCSHP4-201ENST00000538792 PRSS12P56730 875 aa11.22□□□□□ -0.61
GCSHP4-201ENST00000538792 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
GCSHP4-201ENST00000538792 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
GCSHP4-201ENST00000538792 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
GCSHP4-201ENST00000538792 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
GCSHP4-201ENST00000538792 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
GCSHP4-201ENST00000538792 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
GCSHP4-201ENST00000538792 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
GCSHP4-201ENST00000538792 PTGDRQ13258 359 aa11.18□□□□□ -0.62
GCSHP4-201ENST00000538792 NUTM2FA1L443 756 aa11.17□□□□□ -0.62
GCSHP4-201ENST00000538792 SMAPO00193 183 aa11.16□□□□□ -0.62
GCSHP4-201ENST00000538792 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
GCSHP4-201ENST00000538792 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
GCSHP4-201ENST00000538792 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
GCSHP4-201ENST00000538792 PACS2Q86VP3 889 aa11.15□□□□□ -0.62
GCSHP4-201ENST00000538792 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
GCSHP4-201ENST00000538792 GOLGA8CPA6NN73 597 aa11.14□□□□□ -0.63
GCSHP4-201ENST00000538792 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
GCSHP4-201ENST00000538792 WNT2BQ93097 391 aa11.14□□□□□ -0.63
GCSHP4-201ENST00000538792 THSD4Q6ZMP0 1018 aa11.13□□□□□ -0.63
GCSHP4-201ENST00000538792 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
GCSHP4-201ENST00000538792 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
GCSHP4-201ENST00000538792 TATDN2Q93075 761 aa11.12□□□□□ -0.63
GCSHP4-201ENST00000538792 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
GCSHP4-201ENST00000538792 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
GCSHP4-201ENST00000538792 GPR37O15354 613 aa11.1□□□□□ -0.63
GCSHP4-201ENST00000538792 PTPN5P54829 565 aa11.1□□□□□ -0.63
GCSHP4-201ENST00000538792 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
GCSHP4-201ENST00000538792 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
GCSHP4-201ENST00000538792 BCAMP50895 628 aa11.09□□□□□ -0.63
GCSHP4-201ENST00000538792 FCHSD2O94868 740 aa11.08□□□□□ -0.64
GCSHP4-201ENST00000538792 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
GCSHP4-201ENST00000538792 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
GCSHP4-201ENST00000538792 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
GCSHP4-201ENST00000538792 FECHP22830 423 aa11.06□□□□□ -0.64
GCSHP4-201ENST00000538792 EYA1Q99502 592 aa11.04□□□□□ -0.64
GCSHP4-201ENST00000538792 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
GCSHP4-201ENST00000538792 HIC1Q14526 733 aa11.03□□□□□ -0.64
GCSHP4-201ENST00000538792 SAMD7Q7Z3H4 446 aa11.03□□□□□ -0.64
GCSHP4-201ENST00000538792 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
GCSHP4-201ENST00000538792 ADGRG1Q9Y653 693 aa11.03□□□□□ -0.64
GCSHP4-201ENST00000538792 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.02□□□□□ -0.65
GCSHP4-201ENST00000538792 GNPATO15228 680 aa11.01□□□□□ -0.65
GCSHP4-201ENST00000538792 LRCH3Q96II8 777 aa11.01□□□□□ -0.65
GCSHP4-201ENST00000538792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
GCSHP4-201ENST00000538792 WBP1LQ9NX94 342 aa11□□□□□ -0.65
GCSHP4-201ENST00000538792 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
GCSHP4-201ENST00000538792 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
GCSHP4-201ENST00000538792 SWT1Q5T5J6 900 aaKnown RBP10.96□□□□□ -0.65
GCSHP4-201ENST00000538792 RBM46Q8TBY0 533 aaKnown RBP10.96□□□□□ -0.65
GCSHP4-201ENST00000538792 TSR3Q9UJK0 312 aaKnown RBP10.96□□□□□ -0.65
GCSHP4-201ENST00000538792 RCCD1A6NED2 376 aa10.94□□□□□ -0.66
GCSHP4-201ENST00000538792 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
GCSHP4-201ENST00000538792 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
GCSHP4-201ENST00000538792 RNF40O75150 1001 aa10.92□□□□□ -0.66
GCSHP4-201ENST00000538792 DNAJB2P25686 324 aa10.92□□□□□ -0.66
GCSHP4-201ENST00000538792 METTL3Q86U44 580 aaKnown RBP10.92□□□□□ -0.66
GCSHP4-201ENST00000538792 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
GCSHP4-201ENST00000538792 PPP4CP60510 307 aa10.91□□□□□ -0.66
GCSHP4-201ENST00000538792 TMEM134Q9H6X4 195 aa10.91□□□□□ -0.66
GCSHP4-201ENST00000538792 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
GCSHP4-201ENST00000538792 OATP04181 439 aa10.9□□□□□ -0.66
GCSHP4-201ENST00000538792 HDGFP51858 240 aaKnown RBP10.9□□□□□ -0.66
GCSHP4-201ENST00000538792 PHOX2BQ99453 314 aa10.9□□□□□ -0.66
GCSHP4-201ENST00000538792 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms