RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 CDR1P51861 262 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 DHX8Q14562 1220 aaKnown RBP8.51□□□□□ -1.05
SORT1-209ENST00000538502 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 A0A0G2JS52 829 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 TAF3Q5VWG9 929 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 AK7Q96M32 723 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 ANKRD30AQ9BXX3 1397 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 BECN2A8MW95 431 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 MPHOSPH9Q99550 1183 aa8.51□□□□□ -1.05
SORT1-209ENST00000538502 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
SORT1-209ENST00000538502 REC8O95072 547 aa8.5□□□□□ -1.05
SORT1-209ENST00000538502 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
SORT1-209ENST00000538502 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 HMGN5P82970 282 aaKnown RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 CEP89Q96ST8 783 aa8.49□□□□□ -1.05
SORT1-209ENST00000538502 HOOK1Q9UJC3 728 aaKnown RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 ROCK1Q13464 1354 aa8.49□□□□□ -1.05
SORT1-209ENST00000538502 SF3A1Q15459 793 aaKnown RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 U2AF1L5P0DN76 240 aaPredicted RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 U2AF1Q01081 240 aaKnown RBP eCLIP8.49□□□□□ -1.052e-7■■□□□ 13
SORT1-209ENST00000538502 ERCC4Q92889 916 aaPredicted RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 SRPK2P78362 688 aaKnown RBP8.49□□□□□ -1.05
SORT1-209ENST00000538502 H3BQV1 296 aa8.48□□□□□ -1.05
SORT1-209ENST00000538502 CCP110O43303 1012 aa8.48□□□□□ -1.05
SORT1-209ENST00000538502 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
SORT1-209ENST00000538502 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
SORT1-209ENST00000538502 PKD2Q13563 968 aa8.48□□□□□ -1.05
SORT1-209ENST00000538502 DHX57Q6P158 1386 aaKnown RBP8.48□□□□□ -1.05
SORT1-209ENST00000538502 TPD52L1Q16890 204 aaPredicted RBP8.47□□□□□ -1.05
SORT1-209ENST00000538502 RRP9O43818 475 aaKnown RBP8.47□□□□□ -1.05
SORT1-209ENST00000538502 TAOK2Q9UL54 1235 aa8.47□□□□□ -1.05
SORT1-209ENST00000538502 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
SORT1-209ENST00000538502 ANKRD20A12PQ8NF67 263 aa8.47□□□□□ -1.05
SORT1-209ENST00000538502 SOGA1O94964 1423 aa8.47□□□□□ -1.05
SORT1-209ENST00000538502 RUFY2Q8WXA3 655 aa8.47□□□□□ -1.05
SORT1-209ENST00000538502 KCNH8Q96L42 1107 aa8.47□□□□□ -1.05
SORT1-209ENST00000538502 CLSTN1O94985 981 aa8.46□□□□□ -1.05
SORT1-209ENST00000538502 LRRFIP1Q32MZ4 808 aaKnown RBP8.46□□□□□ -1.05
SORT1-209ENST00000538502 NFKBIBQ15653 356 aa8.46□□□□□ -1.06
SORT1-209ENST00000538502 FAM184AQ8NB25 1140 aa8.46□□□□□ -1.06
SORT1-209ENST00000538502 DDX19BQ9UMR2 479 aa8.46□□□□□ -1.06
SORT1-209ENST00000538502 IPO7O95373 1038 aaKnown RBP8.46□□□□□ -1.06
SORT1-209ENST00000538502 UACAQ9BZF9 1416 aa8.46□□□□□ -1.06
SORT1-209ENST00000538502 HSP90B2PQ58FF3 399 aa8.46□□□□□ -1.06
SORT1-209ENST00000538502 TERF2IPQ9NYB0 399 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 EIF4G1Q04637 1599 aaKnown RBP8.45□□□□□ -1.06
SORT1-209ENST00000538502 CUX2O14529 1486 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 CRBNQ96SW2 442 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 NASPP49321 788 aaPredicted RBP8.45□□□□□ -1.06
SORT1-209ENST00000538502 CAVIN1Q6NZI2 390 aaKnown RBP8.45□□□□□ -1.06
SORT1-209ENST00000538502 RUFY1Q96T51 708 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 FOXD4L1Q9NU39 408 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 APBB1O00213 710 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 DCTN1Q14203 1278 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 MNS1Q8NEH6 495 aa8.45□□□□□ -1.06
SORT1-209ENST00000538502 PRKRIP1Q9H875 184 aaPredicted RBP8.45□□□□□ -1.06
SORT1-209ENST00000538502 RSPH4AQ5TD94 716 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 EXOC6Q8TAG9 804 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 RASSF8Q8NHQ8 419 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 CCDC47Q96A33 483 aaKnown RBP8.44□□□□□ -1.06
SORT1-209ENST00000538502 NAT10Q9H0A0 1025 aaKnown RBP8.44□□□□□ -1.06
SORT1-209ENST00000538502 NPHP1O15259 732 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 MBD3O95983 291 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 RDXP35241 583 aaKnown RBP8.44□□□□□ -1.06
SORT1-209ENST00000538502 SASS6Q6UVJ0 657 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 ZNF592Q92610 1267 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 CCDC18Q5T9S5 1454 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 HOMER1Q86YM7 354 aa8.44□□□□□ -1.06
SORT1-209ENST00000538502 CCAR2Q8N163 923 aaKnown RBP8.43□□□□□ -1.06
SORT1-209ENST00000538502 KIF7Q2M1P5 1343 aa8.43□□□□□ -1.06
SORT1-209ENST00000538502 APPP05067 770 aa8.43□□□□□ -1.06
SORT1-209ENST00000538502 RRP12Q5JTH9 1297 aaKnown RBP8.43□□□□□ -1.06
SORT1-209ENST00000538502 INTS3Q68E01 1043 aaKnown RBP8.43□□□□□ -1.06
SORT1-209ENST00000538502 NUP155O75694 1391 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 GORABQ5T7V8 394 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 R3HCC1Q9Y3T6 440 aaKnown RBP8.42□□□□□ -1.06
SORT1-209ENST00000538502 CARMIL2Q6F5E8 1435 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 CPLX2Q6PUV4 134 aaKnown RBP8.42□□□□□ -1.06
SORT1-209ENST00000538502 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 NINLQ9Y2I6 1382 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 ANKRD45Q5TZF3 282 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 CCDC191Q8NCU4 936 aa8.42□□□□□ -1.06
SORT1-209ENST00000538502 ZKSCAN1P17029 563 aaPredicted RBP8.41□□□□□ -1.06
SORT1-209ENST00000538502 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 RNF20Q5VTR2 975 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 MCM2P49736 904 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 LEKR1Q6ZMV7 388 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 PLEKHG5O94827 1062 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 MYO6Q9UM54 1294 aa8.41□□□□□ -1.06
SORT1-209ENST00000538502 USP8P40818 1118 aa8.4□□□□□ -1.06
SORT1-209ENST00000538502 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
SORT1-209ENST00000538502 PDCL2Q8N4E4 241 aa8.4□□□□□ -1.06
SORT1-209ENST00000538502 C22orf23Q9BZE7 217 aa8.4□□□□□ -1.06
SORT1-209ENST00000538502 TRIM29Q14134 588 aa8.4□□□□□ -1.06
SORT1-209ENST00000538502 SLC4A3P48751 1232 aa8.4□□□□□ -1.07
SORT1-209ENST00000538502 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms