RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
MDM1-208ENST00000538454 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
MDM1-208ENST00000538454 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
MDM1-208ENST00000538454 COL9A1P20849 921 aa12.83□□□□□ -0.36
MDM1-208ENST00000538454 KCTD12Q96CX2 325 aaKnown RBP12.83□□□□□ -0.36
MDM1-208ENST00000538454 NBR1Q14596 966 aa12.82□□□□□ -0.36
MDM1-208ENST00000538454 ARIH1Q9Y4X5 557 aaPredicted RBP12.82□□□□□ -0.36
MDM1-208ENST00000538454 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
MDM1-208ENST00000538454 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
MDM1-208ENST00000538454 PROX2Q3B8N5 592 aa12.8□□□□□ -0.36
MDM1-208ENST00000538454 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
MDM1-208ENST00000538454 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
MDM1-208ENST00000538454 NBPF3Q9H094 633 aa12.78□□□□□ -0.36
MDM1-208ENST00000538454 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
MDM1-208ENST00000538454 GRXCR2A6NFK2 248 aa12.76□□□□□ -0.37
MDM1-208ENST00000538454 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
MDM1-208ENST00000538454 MAP3K7O43318 606 aa12.76□□□□□ -0.37
MDM1-208ENST00000538454 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
MDM1-208ENST00000538454 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
MDM1-208ENST00000538454 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
MDM1-208ENST00000538454 WNT2BQ93097 391 aa12.71□□□□□ -0.37
MDM1-208ENST00000538454 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
MDM1-208ENST00000538454 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
MDM1-208ENST00000538454 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
MDM1-208ENST00000538454 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
MDM1-208ENST00000538454 PTPN5P54829 565 aa12.69□□□□□ -0.38
MDM1-208ENST00000538454 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
MDM1-208ENST00000538454 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
MDM1-208ENST00000538454 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
MDM1-208ENST00000538454 OSBPP22059 807 aa12.65□□□□□ -0.38
MDM1-208ENST00000538454 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
MDM1-208ENST00000538454 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
MDM1-208ENST00000538454 LAPTM4BQ86VI4 370 aa12.63□□□□□ -0.39
MDM1-208ENST00000538454 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
MDM1-208ENST00000538454 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
MDM1-208ENST00000538454 TSKSQ9UJT2 592 aa12.61□□□□□ -0.39
MDM1-208ENST00000538454 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
MDM1-208ENST00000538454 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
MDM1-208ENST00000538454 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
MDM1-208ENST00000538454 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
MDM1-208ENST00000538454 CDCA7LQ96GN5 454 aa12.59□□□□□ -0.39
MDM1-208ENST00000538454 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
MDM1-208ENST00000538454 PRSS12P56730 875 aa12.58□□□□□ -0.4
MDM1-208ENST00000538454 BCAMP50895 628 aa12.57□□□□□ -0.4
MDM1-208ENST00000538454 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
MDM1-208ENST00000538454 HAP1P54257 671 aaPredicted RBP12.56□□□□□ -0.4
MDM1-208ENST00000538454 FAM198AQ9UFP1 575 aa12.55□□□□□ -0.4
MDM1-208ENST00000538454 SOWAHBA6NEL2 793 aa12.54□□□□□ -0.4
MDM1-208ENST00000538454 SMAPO00193 183 aa12.52□□□□□ -0.41
MDM1-208ENST00000538454 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
MDM1-208ENST00000538454 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
MDM1-208ENST00000538454 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
MDM1-208ENST00000538454 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
MDM1-208ENST00000538454 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
MDM1-208ENST00000538454 TATDN2Q93075 761 aa12.49□□□□□ -0.41
MDM1-208ENST00000538454 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
MDM1-208ENST00000538454 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
MDM1-208ENST00000538454 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
MDM1-208ENST00000538454 SEMA3EO15041 775 aa12.47□□□□□ -0.41
MDM1-208ENST00000538454 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
MDM1-208ENST00000538454 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
MDM1-208ENST00000538454 NUDT18Q6ZVK8 323 aa12.45□□□□□ -0.42
MDM1-208ENST00000538454 TSR3Q9UJK0 312 aaKnown RBP12.44□□□□□ -0.42
MDM1-208ENST00000538454 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
MDM1-208ENST00000538454 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
MDM1-208ENST00000538454 TTC13Q8NBP0 860 aa12.43□□□□□ -0.42
MDM1-208ENST00000538454 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
MDM1-208ENST00000538454 PTGDRQ13258 359 aa12.4□□□□□ -0.42
MDM1-208ENST00000538454 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
MDM1-208ENST00000538454 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
MDM1-208ENST00000538454 PPP4CP60510 307 aa12.38□□□□□ -0.43
MDM1-208ENST00000538454 RNF40O75150 1001 aa12.37□□□□□ -0.43
MDM1-208ENST00000538454 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
MDM1-208ENST00000538454 ITGBL1O95965 494 aaPredicted RBP12.35□□□□□ -0.43
MDM1-208ENST00000538454 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
MDM1-208ENST00000538454 A0A0G2JS52 829 aa12.32□□□□□ -0.44
MDM1-208ENST00000538454 FCHSD2O94868 740 aa12.32□□□□□ -0.44
MDM1-208ENST00000538454 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
MDM1-208ENST00000538454 SMYD5Q6GMV2 418 aa12.32□□□□□ -0.44
MDM1-208ENST00000538454 EYA1Q99502 592 aa12.32□□□□□ -0.44
MDM1-208ENST00000538454 KCNC4Q03721 635 aa12.3□□□□□ -0.44
MDM1-208ENST00000538454 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
MDM1-208ENST00000538454 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
MDM1-208ENST00000538454 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
MDM1-208ENST00000538454 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
MDM1-208ENST00000538454 RBM46Q8TBY0 533 aaKnown RBP12.27□□□□□ -0.45
MDM1-208ENST00000538454 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
MDM1-208ENST00000538454 DNAJB2P25686 324 aa12.25□□□□□ -0.45
MDM1-208ENST00000538454 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
MDM1-208ENST00000538454 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
MDM1-208ENST00000538454 APLP1P51693 650 aa12.23□□□□□ -0.45
MDM1-208ENST00000538454 HIC1Q14526 733 aa12.23□□□□□ -0.45
MDM1-208ENST00000538454 RCCD1A6NED2 376 aa12.21□□□□□ -0.45
MDM1-208ENST00000538454 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
MDM1-208ENST00000538454 MTRQ99707 1265 aa12.21□□□□□ -0.45
MDM1-208ENST00000538454 RGS20O76081 388 aa12.2□□□□□ -0.46
MDM1-208ENST00000538454 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
MDM1-208ENST00000538454 GNPATO15228 680 aa12.18□□□□□ -0.46
MDM1-208ENST00000538454 GPR37O15354 613 aa12.18□□□□□ -0.46
MDM1-208ENST00000538454 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms