RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 ZFYVE16Q7Z3T8 1539 aa21.32■■□□□ 1
CDH20-203ENST00000538374 EFCAB2Q5VUJ9 269 aa21.31■■□□□ 1
CDH20-203ENST00000538374 INO80Q9ULG1 1556 aaPredicted RBP21.3■■□□□ 1
CDH20-203ENST00000538374 NUP155O75694 1391 aa21.3■■□□□ 1
CDH20-203ENST00000538374 MRS2Q9HD23 443 aa21.28■■□□□ 1
CDH20-203ENST00000538374 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
CDH20-203ENST00000538374 ERBINQ96RT1 1412 aa21.28■■□□□ 1
CDH20-203ENST00000538374 FANCAO15360 1455 aa21.27■■□□□ 1
CDH20-203ENST00000538374 PKD2Q13563 968 aa21.27■■□□□ 1
CDH20-203ENST00000538374 RTEL1-TNFRSF6BF6WH68 1400 aa21.25■□□□□ 0.99
CDH20-203ENST00000538374 CCDC7Q96M83 1385 aa21.25■□□□□ 0.99
CDH20-203ENST00000538374 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
CDH20-203ENST00000538374 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
CDH20-203ENST00000538374 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
CDH20-203ENST00000538374 ATP7AQ04656 1500 aa21.21■□□□□ 0.99
CDH20-203ENST00000538374 MSH5O43196 834 aa21.2■□□□□ 0.98
CDH20-203ENST00000538374 CFAP74Q9C0B2 1584 aa21.19■□□□□ 0.98
CDH20-203ENST00000538374 ADGRL1O94910 1474 aa21.19■□□□□ 0.98
CDH20-203ENST00000538374 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
CDH20-203ENST00000538374 POLR1AO95602 1720 aaPredicted RBP21.17■□□□□ 0.98
CDH20-203ENST00000538374 KIDINS220Q9ULH0 1771 aa21.16■□□□□ 0.98
CDH20-203ENST00000538374 PLA2R1Q13018 1463 aa21.16■□□□□ 0.98
CDH20-203ENST00000538374 EIF2AK4Q9P2K8 1649 aaKnown RBP21.15■□□□□ 0.98
CDH20-203ENST00000538374 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
CDH20-203ENST00000538374 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
CDH20-203ENST00000538374 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
CDH20-203ENST00000538374 UHRF1BP1Q6BDS2 1440 aa21.14■□□□□ 0.97
CDH20-203ENST00000538374 AFAP1Q8N556 730 aa21.13■□□□□ 0.97
CDH20-203ENST00000538374 VWDEQ8N2E2 1590 aa21.13■□□□□ 0.97
CDH20-203ENST00000538374 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
CDH20-203ENST00000538374 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
CDH20-203ENST00000538374 KDM5CP41229 1560 aa21.13■□□□□ 0.97
CDH20-203ENST00000538374 ATP10AO60312 1499 aa21.12■□□□□ 0.97
CDH20-203ENST00000538374 E9PCH4 1651 aa21.12■□□□□ 0.97
CDH20-203ENST00000538374 SPATA31E1Q6ZUB1 1445 aa21.12■□□□□ 0.97
CDH20-203ENST00000538374 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
CDH20-203ENST00000538374 KDM2AQ9Y2K7 1162 aa21.11■□□□□ 0.97
CDH20-203ENST00000538374 MAP3K4Q9Y6R4 1608 aa21.09■□□□□ 0.97
CDH20-203ENST00000538374 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.97
CDH20-203ENST00000538374 CD109Q6YHK3 1445 aa21.08■□□□□ 0.96
CDH20-203ENST00000538374 PRDM15P57071 1507 aaPredicted RBP21.07■□□□□ 0.96
CDH20-203ENST00000538374 TET3O43151 1660 aa21.07■□□□□ 0.96
CDH20-203ENST00000538374 ZNF518AQ6AHZ1 1483 aa21.07■□□□□ 0.96
CDH20-203ENST00000538374 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
CDH20-203ENST00000538374 POGZQ7Z3K3 1410 aa21.05■□□□□ 0.96
CDH20-203ENST00000538374 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
CDH20-203ENST00000538374 PPP4R2Q9NY27 417 aa21.03■□□□□ 0.96
CDH20-203ENST00000538374 GLI2P10070 1586 aa21.03■□□□□ 0.96
CDH20-203ENST00000538374 RNF17Q9BXT8 1623 aaKnown RBP21.03■□□□□ 0.96
CDH20-203ENST00000538374 BCORL1Q5H9F3 1711 aa21.03■□□□□ 0.96
CDH20-203ENST00000538374 HECW2Q9P2P5 1572 aa21.02■□□□□ 0.96
CDH20-203ENST00000538374 TRPM1Q7Z4N2 1603 aa21.02■□□□□ 0.96
CDH20-203ENST00000538374 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
CDH20-203ENST00000538374 FRMPD1Q5SYB0 1578 aa21.02■□□□□ 0.96
CDH20-203ENST00000538374 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.95
CDH20-203ENST00000538374 NEO1Q92859 1461 aa21.01■□□□□ 0.95
CDH20-203ENST00000538374 USP47Q96K76 1375 aa21.01■□□□□ 0.95
CDH20-203ENST00000538374 CEP152O94986 1710 aa21.01■□□□□ 0.95
CDH20-203ENST00000538374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
CDH20-203ENST00000538374 TRPM2O94759 1503 aa21■□□□□ 0.95
CDH20-203ENST00000538374 DHX29Q7Z478 1369 aaKnown RBP21■□□□□ 0.95
CDH20-203ENST00000538374 MLH3Q9UHC1 1453 aa21■□□□□ 0.95
CDH20-203ENST00000538374 ABCA6Q8N139 1617 aa21■□□□□ 0.95
CDH20-203ENST00000538374 RICTORQ6R327 1708 aa20.99■□□□□ 0.95
CDH20-203ENST00000538374 A2MP01023 1474 aa20.99■□□□□ 0.95
CDH20-203ENST00000538374 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
CDH20-203ENST00000538374 PTPRTO14522 1441 aa20.97■□□□□ 0.95
CDH20-203ENST00000538374 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
CDH20-203ENST00000538374 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
CDH20-203ENST00000538374 PRAG1Q86YV5 1406 aa20.95■□□□□ 0.94
CDH20-203ENST00000538374 LAMC1P11047 1609 aa20.95■□□□□ 0.94
CDH20-203ENST00000538374 DIP2BQ9P265 1576 aa20.94■□□□□ 0.94
CDH20-203ENST00000538374 ST20-MTHFSA0A0A6YYL1 179 aa20.94■□□□□ 0.94
CDH20-203ENST00000538374 DCAF11Q8TEB1 546 aa20.94■□□□□ 0.94
CDH20-203ENST00000538374 LMTK2Q8IWU2 1503 aa20.94■□□□□ 0.94
CDH20-203ENST00000538374 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
CDH20-203ENST00000538374 EFCAB6Q5THR3 1501 aa20.93■□□□□ 0.94
CDH20-203ENST00000538374 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
CDH20-203ENST00000538374 NEURL4Q96JN8 1562 aa20.91■□□□□ 0.94
CDH20-203ENST00000538374 DIP2CQ9Y2E4 1556 aa20.9■□□□□ 0.94
CDH20-203ENST00000538374 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
CDH20-203ENST00000538374 CYB5RLQ6IPT4 315 aa20.88■□□□□ 0.93
CDH20-203ENST00000538374 MADDQ8WXG6 1647 aa20.88■□□□□ 0.93
CDH20-203ENST00000538374 PNISRQ8TF01 805 aaKnown RBP20.86■□□□□ 0.93
CDH20-203ENST00000538374 KANK1Q14678 1352 aa20.86■□□□□ 0.93
CDH20-203ENST00000538374 GPRASP1Q5JY77 1395 aa20.86■□□□□ 0.93
CDH20-203ENST00000538374 KIF3BO15066 747 aa20.85■□□□□ 0.93
CDH20-203ENST00000538374 ERICH6Q7L0X2 663 aa20.85■□□□□ 0.93
CDH20-203ENST00000538374 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
CDH20-203ENST00000538374 IFT172Q9UG01 1749 aa20.83■□□□□ 0.93
CDH20-203ENST00000538374 NUDCQ9Y266 331 aa20.83■□□□□ 0.93
CDH20-203ENST00000538374 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.92
CDH20-203ENST00000538374 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
CDH20-203ENST00000538374 ERICH6BQ5W0A0 696 aa20.82■□□□□ 0.92
CDH20-203ENST00000538374 MROH2AA6NES4 1674 aa20.81■□□□□ 0.92
CDH20-203ENST00000538374 KIF1BO60333 1816 aa20.81■□□□□ 0.92
CDH20-203ENST00000538374 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
CDH20-203ENST00000538374 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
CDH20-203ENST00000538374 ABCC3O15438 1527 aa20.79■□□□□ 0.92
CDH20-203ENST00000538374 CAMSAP1Q5T5Y3 1602 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms