RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
SCARB1-205ENST00000538291 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
SCARB1-205ENST00000538291 CLUAP1Q96AJ1 413 aa20.98■□□□□ 0.95
SCARB1-205ENST00000538291 TOMM22Q9NS69 142 aa20.98■□□□□ 0.95
SCARB1-205ENST00000538291 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
SCARB1-205ENST00000538291 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
SCARB1-205ENST00000538291 SLKQ9H2G2 1235 aaPredicted RBP20.95■□□□□ 0.94
SCARB1-205ENST00000538291 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
SCARB1-205ENST00000538291 PDE3BQ13370 1112 aa20.94■□□□□ 0.94
SCARB1-205ENST00000538291 NOC3LQ8WTT2 800 aaKnown RBP20.94■□□□□ 0.94
SCARB1-205ENST00000538291 CSPP1Q1MSJ5 1256 aa20.94■□□□□ 0.94
SCARB1-205ENST00000538291 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
SCARB1-205ENST00000538291 PHLDB1Q86UU1 1377 aa20.93■□□□□ 0.94
SCARB1-205ENST00000538291 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
SCARB1-205ENST00000538291 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
SCARB1-205ENST00000538291 EVA1CP58658 441 aa20.92■□□□□ 0.94
SCARB1-205ENST00000538291 KIF3AQ9Y496 699 aa20.92■□□□□ 0.94
SCARB1-205ENST00000538291 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
SCARB1-205ENST00000538291 COG3Q96JB2 828 aa20.92■□□□□ 0.94
SCARB1-205ENST00000538291 UACAQ9BZF9 1416 aa20.91■□□□□ 0.94
SCARB1-205ENST00000538291 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
SCARB1-205ENST00000538291 MARCH6O60337 910 aa20.9■□□□□ 0.94
SCARB1-205ENST00000538291 CCDC144AA2RUR9 1427 aa20.89■□□□□ 0.93
SCARB1-205ENST00000538291 GZF1Q9H116 711 aaPredicted RBP20.88■□□□□ 0.93
SCARB1-205ENST00000538291 KIF16BQ96L93 1317 aa20.87■□□□□ 0.93
SCARB1-205ENST00000538291 VPS53Q5VIR6 699 aa20.87■□□□□ 0.93
SCARB1-205ENST00000538291 TEFQ10587 303 aa20.87■□□□□ 0.93
SCARB1-205ENST00000538291 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
SCARB1-205ENST00000538291 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
SCARB1-205ENST00000538291 RBM19Q9Y4C8 960 aaKnown RBP20.86■□□□□ 0.93
SCARB1-205ENST00000538291 ST18O60284 1047 aa20.85■□□□□ 0.93
SCARB1-205ENST00000538291 CGNL1Q0VF96 1302 aa20.85■□□□□ 0.93
SCARB1-205ENST00000538291 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
SCARB1-205ENST00000538291 MSH5O43196 834 aa20.84■□□□□ 0.93
SCARB1-205ENST00000538291 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
SCARB1-205ENST00000538291 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
SCARB1-205ENST00000538291 RRP7AQ9Y3A4 280 aaKnown RBP20.83■□□□□ 0.93
SCARB1-205ENST00000538291 SF3A1Q15459 793 aaKnown RBP20.83■□□□□ 0.93
SCARB1-205ENST00000538291 PRM3Q9NNZ6 103 aa20.83■□□□□ 0.93
SCARB1-205ENST00000538291 CHMP4CQ96CF2 233 aa20.83■□□□□ 0.92
SCARB1-205ENST00000538291 PANK3Q9H999 370 aa20.82■□□□□ 0.92
SCARB1-205ENST00000538291 CREBRFQ8IUR6 639 aa20.82■□□□□ 0.92
SCARB1-205ENST00000538291 NEXNQ0ZGT2 675 aa20.82■□□□□ 0.92
SCARB1-205ENST00000538291 ST20-MTHFSA0A0A6YYL1 179 aa20.82■□□□□ 0.92
SCARB1-205ENST00000538291 PTPRGP23470 1445 aa20.82■□□□□ 0.92
SCARB1-205ENST00000538291 MYBBP1AQ9BQG0 1328 aaKnown RBP20.81■□□□□ 0.92
SCARB1-205ENST00000538291 ELL2O00472 640 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-205ENST00000538291 CEP89Q96ST8 783 aa20.81■□□□□ 0.92
SCARB1-205ENST00000538291 LRRFIP1Q32MZ4 808 aaKnown RBP20.79■□□□□ 0.92
SCARB1-205ENST00000538291 DEKP35659 375 aaKnown RBP20.79■□□□□ 0.92
SCARB1-205ENST00000538291 AKAP17AQ02040 695 aaKnown RBP20.78■□□□□ 0.92
SCARB1-205ENST00000538291 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
SCARB1-205ENST00000538291 NOL10Q9BSC4 688 aaKnown RBP20.78■□□□□ 0.92
SCARB1-205ENST00000538291 RILPL2Q969X0 211 aa20.77■□□□□ 0.92
SCARB1-205ENST00000538291 FOXD4L1Q9NU39 408 aa20.77■□□□□ 0.91
SCARB1-205ENST00000538291 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
SCARB1-205ENST00000538291 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
SCARB1-205ENST00000538291 PHF14O94880 888 aa20.76■□□□□ 0.91
SCARB1-205ENST00000538291 PDE4CQ08493 712 aa20.76■□□□□ 0.91
SCARB1-205ENST00000538291 H3BQV1 296 aa20.76■□□□□ 0.91
SCARB1-205ENST00000538291 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
SCARB1-205ENST00000538291 TPM3P06753 285 aa20.75■□□□□ 0.91
SCARB1-205ENST00000538291 GOLGA6L3A6NEY3 463 aa20.75■□□□□ 0.91
SCARB1-205ENST00000538291 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
SCARB1-205ENST00000538291 ZKSCAN2Q63HK3 967 aa20.75■□□□□ 0.91
SCARB1-205ENST00000538291 SYNE3Q6ZMZ3 975 aa20.75■□□□□ 0.91
SCARB1-205ENST00000538291 FAM184AQ8NB25 1140 aa20.74■□□□□ 0.91
SCARB1-205ENST00000538291 A0A0U1RQG5 324 aaPredicted RBP20.74■□□□□ 0.91
SCARB1-205ENST00000538291 PSME1Q06323 249 aa20.74■□□□□ 0.91
SCARB1-205ENST00000538291 NGEFQ8N5V2 710 aa20.74■□□□□ 0.91
SCARB1-205ENST00000538291 TRIM34Q9BYJ4 488 aa20.74■□□□□ 0.91
SCARB1-205ENST00000538291 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
SCARB1-205ENST00000538291 E9PSI1 815 aa20.73■□□□□ 0.91
SCARB1-205ENST00000538291 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
SCARB1-205ENST00000538291 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
SCARB1-205ENST00000538291 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
SCARB1-205ENST00000538291 ANKRD45Q5TZF3 282 aa20.73■□□□□ 0.91
SCARB1-205ENST00000538291 MEX3CQ5U5Q3 659 aaKnown RBP20.73■□□□□ 0.91
SCARB1-205ENST00000538291 CPLX2Q6PUV4 134 aaKnown RBP20.71■□□□□ 0.91
SCARB1-205ENST00000538291 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
SCARB1-205ENST00000538291 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
SCARB1-205ENST00000538291 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.7■□□□□ 0.9
SCARB1-205ENST00000538291 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-205ENST00000538291 CTDP1Q9Y5B0 961 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-205ENST00000538291 TPD52L1Q16890 204 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-205ENST00000538291 DDX58O95786 925 aaKnown RBP20.69■□□□□ 0.9
SCARB1-205ENST00000538291 PES1O00541 588 aaKnown RBP20.69■□□□□ 0.9
SCARB1-205ENST00000538291 ATP6V1DQ9Y5K8 247 aa20.69■□□□□ 0.9
SCARB1-205ENST00000538291 DIAPH1O60610 1272 aaKnown RBP20.69■□□□□ 0.9
SCARB1-205ENST00000538291 GOLGA6L1Q8N7Z2 621 aa20.68■□□□□ 0.9
SCARB1-205ENST00000538291 RUFY2Q8WXA3 655 aa20.68■□□□□ 0.9
SCARB1-205ENST00000538291 TCEAL9Q9UHQ7 104 aa20.68■□□□□ 0.9
SCARB1-205ENST00000538291 FOXD4L5Q5VV16 416 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-205ENST00000538291 FOXD4L4Q8WXT5 416 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-205ENST00000538291 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
SCARB1-205ENST00000538291 CENPQQ7L2Z9 268 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-205ENST00000538291 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-205ENST00000538291 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-205ENST00000538291 VPS37DQ86XT2 251 aa20.66■□□□□ 0.9
SCARB1-205ENST00000538291 RAD21O60216 631 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms