RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 PRG4Q92954 1404 aaPredicted RBP9.73□□□□□ -0.85
DDB1-210ENST00000538129 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
DDB1-210ENST00000538129 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
DDB1-210ENST00000538129 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
DDB1-210ENST00000538129 IQGAP2Q13576 1575 aa9.71□□□□□ -0.86
DDB1-210ENST00000538129 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
DDB1-210ENST00000538129 ARAP1Q96P48 1450 aa9.7□□□□□ -0.86
DDB1-210ENST00000538129 KIF21BO75037 1637 aa9.7□□□□□ -0.86
DDB1-210ENST00000538129 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
DDB1-210ENST00000538129 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
DDB1-210ENST00000538129 CTTNBP2Q8WZ74 1663 aa9.68□□□□□ -0.86
DDB1-210ENST00000538129 ERCC6L2Q5T890 1561 aa9.68□□□□□ -0.86
DDB1-210ENST00000538129 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
DDB1-210ENST00000538129 DOK7Q18PE1 504 aa9.68□□□□□ -0.86
DDB1-210ENST00000538129 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
DDB1-210ENST00000538129 CRISPLD2Q9H0B8 497 aa9.68□□□□□ -0.86
DDB1-210ENST00000538129 TSHZ2Q9NRE2 1034 aa9.68□□□□□ -0.86
DDB1-210ENST00000538129 UGGT2Q9NYU1 1516 aa9.67□□□□□ -0.86
DDB1-210ENST00000538129 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
DDB1-210ENST00000538129 FOXK1P85037 733 aa9.67□□□□□ -0.86
DDB1-210ENST00000538129 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
DDB1-210ENST00000538129 KIF3CO14782 793 aa9.65□□□□□ -0.86
DDB1-210ENST00000538129 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
DDB1-210ENST00000538129 PTPRGP23470 1445 aa9.65□□□□□ -0.87
DDB1-210ENST00000538129 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
DDB1-210ENST00000538129 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
DDB1-210ENST00000538129 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
DDB1-210ENST00000538129 DISP1Q96F81 1524 aa9.64□□□□□ -0.87
DDB1-210ENST00000538129 TBC1D12O60347 775 aa9.63□□□□□ -0.87
DDB1-210ENST00000538129 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
DDB1-210ENST00000538129 NCKAP5LQ9HCH0 1330 aa9.62□□□□□ -0.87
DDB1-210ENST00000538129 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
DDB1-210ENST00000538129 PLPP6Q8IY26 295 aa9.62□□□□□ -0.87
DDB1-210ENST00000538129 MFSD10Q14728 455 aa9.61□□□□□ -0.87
DDB1-210ENST00000538129 DSG2Q14126 1118 aa9.6□□□□□ -0.87
DDB1-210ENST00000538129 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
DDB1-210ENST00000538129 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
DDB1-210ENST00000538129 TTBK1Q5TCY1 1321 aaPredicted RBP9.59□□□□□ -0.87
DDB1-210ENST00000538129 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
DDB1-210ENST00000538129 RANGAP1P46060 587 aaPredicted RBP9.58□□□□□ -0.88
DDB1-210ENST00000538129 P3H3Q8IVL6 736 aa9.58□□□□□ -0.88
DDB1-210ENST00000538129 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
DDB1-210ENST00000538129 SLC34A2O95436 690 aa9.57□□□□□ -0.88
DDB1-210ENST00000538129 SAMD9Q5K651 1589 aa9.57□□□□□ -0.88
DDB1-210ENST00000538129 UHRF1BP1LA0JNW5 1464 aa9.56□□□□□ -0.88
DDB1-210ENST00000538129 E2F4Q16254 413 aa9.56□□□□□ -0.88
DDB1-210ENST00000538129 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
DDB1-210ENST00000538129 ADCY10Q96PN6 1610 aa9.54□□□□□ -0.88
DDB1-210ENST00000538129 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
DDB1-210ENST00000538129 FAM163AQ96GL9 167 aaPredicted RBP9.54□□□□□ -0.88
DDB1-210ENST00000538129 ABCC2Q92887 1545 aa9.52□□□□□ -0.88
DDB1-210ENST00000538129 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
DDB1-210ENST00000538129 PLB1Q6P1J6 1458 aa9.52□□□□□ -0.89
DDB1-210ENST00000538129 ABCA8O94911 1581 aa9.51□□□□□ -0.89
DDB1-210ENST00000538129 FHOD3Q2V2M9 1422 aa9.51□□□□□ -0.89
DDB1-210ENST00000538129 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
DDB1-210ENST00000538129 ARHGAP35Q9NRY4 1499 aa9.51□□□□□ -0.89
DDB1-210ENST00000538129 KDM5BQ9UGL1 1544 aa9.51□□□□□ -0.89
DDB1-210ENST00000538129 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
DDB1-210ENST00000538129 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
DDB1-210ENST00000538129 FMN1Q68DA7 1419 aa9.49□□□□□ -0.89
DDB1-210ENST00000538129 BCANQ96GW7 911 aa9.49□□□□□ -0.89
DDB1-210ENST00000538129 MAPKBP1O60336 1514 aa9.49□□□□□ -0.89
DDB1-210ENST00000538129 CLIP1P30622 1438 aa9.48□□□□□ -0.89
DDB1-210ENST00000538129 UPF1Q92900 1129 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDB1-210ENST00000538129 PCDHGA4Q9Y5G9 962 aa9.48□□□□□ -0.89
DDB1-210ENST00000538129 HOXB1P14653 301 aaPredicted RBP9.47□□□□□ -0.89
DDB1-210ENST00000538129 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
DDB1-210ENST00000538129 RAPGEF6Q8TEU7 1601 aa9.46□□□□□ -0.89
DDB1-210ENST00000538129 ST18O60284 1047 aa9.46□□□□□ -0.9
DDB1-210ENST00000538129 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
DDB1-210ENST00000538129 ASXL2Q76L83 1435 aa9.46□□□□□ -0.9
DDB1-210ENST00000538129 ATP10BO94823 1461 aa9.46□□□□□ -0.9
DDB1-210ENST00000538129 ZCCHC11Q5TAX3 1644 aaKnown RBP9.45□□□□□ -0.9
DDB1-210ENST00000538129 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
DDB1-210ENST00000538129 FAM69CQ0P6D2 419 aa9.45□□□□□ -0.9
DDB1-210ENST00000538129 ARSIQ5FYB1 569 aa9.45□□□□□ -0.9
DDB1-210ENST00000538129 CEP162Q5TB80 1403 aa9.45□□□□□ -0.9
DDB1-210ENST00000538129 ABCC10Q5T3U5 1492 aa9.45□□□□□ -0.9
DDB1-210ENST00000538129 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
DDB1-210ENST00000538129 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
DDB1-210ENST00000538129 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
DDB1-210ENST00000538129 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
DDB1-210ENST00000538129 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
DDB1-210ENST00000538129 PLEKHD1A6NEE1 506 aa9.43□□□□□ -0.9
DDB1-210ENST00000538129 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
DDB1-210ENST00000538129 EMP3P54852 163 aa9.43□□□□□ -0.9
DDB1-210ENST00000538129 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
DDB1-210ENST00000538129 CASKIN1Q8WXD9 1431 aa9.42□□□□□ -0.9
DDB1-210ENST00000538129 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
DDB1-210ENST00000538129 KIF13AQ9H1H9 1805 aa9.42□□□□□ -0.9
DDB1-210ENST00000538129 WDR7Q9Y4E6 1490 aa9.41□□□□□ -0.9
DDB1-210ENST00000538129 EVI5O60447 810 aa9.41□□□□□ -0.9
DDB1-210ENST00000538129 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
DDB1-210ENST00000538129 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
DDB1-210ENST00000538129 CDK11AQ9UQ88 783 aaPredicted RBP9.41□□□□□ -0.9
DDB1-210ENST00000538129 GLI2P10070 1586 aa9.41□□□□□ -0.9
DDB1-210ENST00000538129 ERBB3P21860 1342 aa9.4□□□□□ -0.9
DDB1-210ENST00000538129 DPYSL4O14531 572 aa9.4□□□□□ -0.9
DDB1-210ENST00000538129 NUDT7P0C024 238 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms