RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
SNX17-210ENST00000537606 IQGAP3Q86VI3 1631 aa24.4■■□□□ 1.5
SNX17-210ENST00000537606 CCDC7Q96M83 1385 aa24.38■■□□□ 1.49
SNX17-210ENST00000537606 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
SNX17-210ENST00000537606 MAGI2Q86UL8 1455 aa24.36■■□□□ 1.49
SNX17-210ENST00000537606 CD109Q6YHK3 1445 aa24.36■■□□□ 1.49
SNX17-210ENST00000537606 ATP7AQ04656 1500 aa24.36■■□□□ 1.49
SNX17-210ENST00000537606 USP47Q96K76 1375 aa24.36■■□□□ 1.49
SNX17-210ENST00000537606 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
SNX17-210ENST00000537606 KIF3BO15066 747 aa24.35■■□□□ 1.49
SNX17-210ENST00000537606 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
SNX17-210ENST00000537606 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
SNX17-210ENST00000537606 CCER2I3L3R5 266 aa24.32■■□□□ 1.48
SNX17-210ENST00000537606 POLR3GLQ9BT43 218 aa24.32■■□□□ 1.48
SNX17-210ENST00000537606 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
SNX17-210ENST00000537606 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
SNX17-210ENST00000537606 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
SNX17-210ENST00000537606 DHX29Q7Z478 1369 aaKnown RBP24.26■■□□□ 1.47
SNX17-210ENST00000537606 KDM5CP41229 1560 aa24.25■■□□□ 1.47
SNX17-210ENST00000537606 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
SNX17-210ENST00000537606 A2MP01023 1474 aa24.24■■□□□ 1.47
SNX17-210ENST00000537606 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
SNX17-210ENST00000537606 BCORL1Q5H9F3 1711 aa24.23■■□□□ 1.47
SNX17-210ENST00000537606 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
SNX17-210ENST00000537606 ST20-MTHFSA0A0A6YYL1 179 aa24.23■■□□□ 1.47
SNX17-210ENST00000537606 E9PCH4 1651 aa24.23■■□□□ 1.47
SNX17-210ENST00000537606 ATP10AO60312 1499 aa24.22■■□□□ 1.47
SNX17-210ENST00000537606 KIDINS220Q9ULH0 1771 aa24.22■■□□□ 1.47
SNX17-210ENST00000537606 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
SNX17-210ENST00000537606 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
SNX17-210ENST00000537606 KANK1Q14678 1352 aa24.21■■□□□ 1.47
SNX17-210ENST00000537606 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
SNX17-210ENST00000537606 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
SNX17-210ENST00000537606 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
SNX17-210ENST00000537606 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
SNX17-210ENST00000537606 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
SNX17-210ENST00000537606 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
SNX17-210ENST00000537606 GGT6Q6P531 493 aa24.14■■□□□ 1.45
SNX17-210ENST00000537606 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
SNX17-210ENST00000537606 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
SNX17-210ENST00000537606 CFAP74Q9C0B2 1584 aa24.13■■□□□ 1.45
SNX17-210ENST00000537606 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
SNX17-210ENST00000537606 TRPM1Q7Z4N2 1603 aa24.13■■□□□ 1.45
SNX17-210ENST00000537606 MROH1Q8NDA8 1641 aa24.13■■□□□ 1.45
SNX17-210ENST00000537606 VWDEQ8N2E2 1590 aa24.12■■□□□ 1.45
SNX17-210ENST00000537606 TET3O43151 1660 aa24.12■■□□□ 1.45
SNX17-210ENST00000537606 PTPRTO14522 1441 aa24.11■■□□□ 1.45
SNX17-210ENST00000537606 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
SNX17-210ENST00000537606 TRPM2O94759 1503 aa24.11■■□□□ 1.45
SNX17-210ENST00000537606 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
SNX17-210ENST00000537606 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
SNX17-210ENST00000537606 SPHKAPQ2M3C7 1700 aa24.09■■□□□ 1.45
SNX17-210ENST00000537606 MLH3Q9UHC1 1453 aa24.09■■□□□ 1.45
SNX17-210ENST00000537606 CLTCL1P53675 1640 aa24.08■■□□□ 1.45
SNX17-210ENST00000537606 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
SNX17-210ENST00000537606 NEO1Q92859 1461 aa24.07■■□□□ 1.44
SNX17-210ENST00000537606 HECW2Q9P2P5 1572 aa24.06■■□□□ 1.44
SNX17-210ENST00000537606 UGGT1Q9NYU2 1555 aa24.05■■□□□ 1.44
SNX17-210ENST00000537606 ARID4BQ4LE39 1312 aaPredicted RBP24.05■■□□□ 1.44
SNX17-210ENST00000537606 FRMPD1Q5SYB0 1578 aa24.05■■□□□ 1.44
SNX17-210ENST00000537606 GPRASP1Q5JY77 1395 aa24.04■■□□□ 1.44
SNX17-210ENST00000537606 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
SNX17-210ENST00000537606 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
SNX17-210ENST00000537606 CEP152O94986 1710 aa24.01■■□□□ 1.43
SNX17-210ENST00000537606 MAP3K4Q9Y6R4 1608 aa24.01■■□□□ 1.43
SNX17-210ENST00000537606 PPRC1Q5VV67 1664 aaKnown RBP24■■□□□ 1.43
SNX17-210ENST00000537606 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
SNX17-210ENST00000537606 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
SNX17-210ENST00000537606 HNRNPUQ00839 825 aaKnown RBP eCLIP24■■□□□ 1.43
SNX17-210ENST00000537606 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
SNX17-210ENST00000537606 CFAP65Q6ZU64 1925 aaKnown RBP23.99■■□□□ 1.43
SNX17-210ENST00000537606 CHGAP10645 457 aaKnown RBP23.98■■□□□ 1.43
SNX17-210ENST00000537606 TESK2Q96S53 571 aa23.96■■□□□ 1.43
SNX17-210ENST00000537606 RNF17Q9BXT8 1623 aaKnown RBP23.96■■□□□ 1.43
SNX17-210ENST00000537606 YEATS2Q9ULM3 1422 aa23.96■■□□□ 1.43
SNX17-210ENST00000537606 MADDQ8WXG6 1647 aa23.94■■□□□ 1.42
SNX17-210ENST00000537606 NPATQ14207 1427 aa23.94■■□□□ 1.42
SNX17-210ENST00000537606 DISP3Q9P2K9 1392 aa23.93■■□□□ 1.42
SNX17-210ENST00000537606 LMTK2Q8IWU2 1503 aa23.93■■□□□ 1.42
SNX17-210ENST00000537606 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
SNX17-210ENST00000537606 GLI2P10070 1586 aa23.92■■□□□ 1.42
SNX17-210ENST00000537606 DIP2CQ9Y2E4 1556 aa23.92■■□□□ 1.42
SNX17-210ENST00000537606 TSPOAP1O95153 1857 aa23.91■■□□□ 1.42
SNX17-210ENST00000537606 ADGRF5Q8IZF2 1346 aa23.91■■□□□ 1.42
SNX17-210ENST00000537606 LAMC1P11047 1609 aa23.91■■□□□ 1.42
SNX17-210ENST00000537606 DIP2BQ9P265 1576 aa23.89■■□□□ 1.42
SNX17-210ENST00000537606 FKBP8Q14318 412 aa23.89■■□□□ 1.42
SNX17-210ENST00000537606 CFAP70Q5T0N1 1121 aa23.89■■□□□ 1.42
SNX17-210ENST00000537606 BCANQ96GW7 911 aa23.89■■□□□ 1.42
SNX17-210ENST00000537606 STAC3Q96MF2 364 aa23.88■■□□□ 1.41
SNX17-210ENST00000537606 ABCC3O15438 1527 aa23.87■■□□□ 1.41
SNX17-210ENST00000537606 TMF1P82094 1093 aa23.87■■□□□ 1.41
SNX17-210ENST00000537606 PELP1Q8IZL8 1130 aaKnown RBP23.87■■□□□ 1.41
SNX17-210ENST00000537606 KIF1BO60333 1816 aa23.86■■□□□ 1.41
SNX17-210ENST00000537606 COL17A1Q9UMD9 1497 aaPredicted RBP23.86■■□□□ 1.41
SNX17-210ENST00000537606 MROH2AA6NES4 1674 aa23.84■■□□□ 1.41
SNX17-210ENST00000537606 NOS1P29475 1434 aa23.8■■□□□ 1.4
SNX17-210ENST00000537606 PANK3Q9H999 370 aa23.8■■□□□ 1.4
SNX17-210ENST00000537606 SCAF11Q99590 1463 aaKnown RBP23.8■■□□□ 1.4
SNX17-210ENST00000537606 NUTM2DQ5VT03 806 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms