RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 BHMG1C9JSJ3 638 aaPredicted RBP11.99□□□□□ -0.49
SRGAP1-203ENST00000537585 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
SRGAP1-203ENST00000537585 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
SRGAP1-203ENST00000537585 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
SRGAP1-203ENST00000537585 NBR1Q14596 966 aa11.98□□□□□ -0.49
SRGAP1-203ENST00000537585 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
SRGAP1-203ENST00000537585 C6orf132Q5T0Z8 1188 aa11.97□□□□□ -0.49
SRGAP1-203ENST00000537585 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
SRGAP1-203ENST00000537585 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
SRGAP1-203ENST00000537585 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
SRGAP1-203ENST00000537585 EPAS1Q99814 870 aa11.94□□□□□ -0.5
SRGAP1-203ENST00000537585 GRXCR2A6NFK2 248 aa11.93□□□□□ -0.5
SRGAP1-203ENST00000537585 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
SRGAP1-203ENST00000537585 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
SRGAP1-203ENST00000537585 MAP3K7O43318 606 aa11.9□□□□□ -0.5
SRGAP1-203ENST00000537585 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
SRGAP1-203ENST00000537585 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
SRGAP1-203ENST00000537585 STAC3Q96MF2 364 aa11.89□□□□□ -0.51
SRGAP1-203ENST00000537585 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
SRGAP1-203ENST00000537585 OSBPP22059 807 aa11.88□□□□□ -0.51
SRGAP1-203ENST00000537585 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
SRGAP1-203ENST00000537585 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
SRGAP1-203ENST00000537585 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
SRGAP1-203ENST00000537585 PTPN5P54829 565 aa11.87□□□□□ -0.51
SRGAP1-203ENST00000537585 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
SRGAP1-203ENST00000537585 MLLT3P42568 568 aaPredicted RBP11.86□□□□□ -0.51
SRGAP1-203ENST00000537585 FAM198AQ9UFP1 575 aa11.86□□□□□ -0.51
SRGAP1-203ENST00000537585 RABGEF1Q9UJ41 708 aa11.86□□□□□ -0.51
SRGAP1-203ENST00000537585 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
SRGAP1-203ENST00000537585 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
SRGAP1-203ENST00000537585 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
SRGAP1-203ENST00000537585 WNT2BQ93097 391 aa11.84□□□□□ -0.51
SRGAP1-203ENST00000537585 NBPF3Q9H094 633 aa11.83□□□□□ -0.52
SRGAP1-203ENST00000537585 BCAMP50895 628 aa11.81□□□□□ -0.52
SRGAP1-203ENST00000537585 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
SRGAP1-203ENST00000537585 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
SRGAP1-203ENST00000537585 SMAPO00193 183 aa11.79□□□□□ -0.52
SRGAP1-203ENST00000537585 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
SRGAP1-203ENST00000537585 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
SRGAP1-203ENST00000537585 ZFRQ96KR1 1074 aaKnown RBP11.76□□□□□ -0.53
SRGAP1-203ENST00000537585 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
SRGAP1-203ENST00000537585 PRSS12P56730 875 aa11.74□□□□□ -0.53
SRGAP1-203ENST00000537585 SEMA3EO15041 775 aa11.73□□□□□ -0.53
SRGAP1-203ENST00000537585 ANKK1Q8NFD2 765 aa11.73□□□□□ -0.53
SRGAP1-203ENST00000537585 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
SRGAP1-203ENST00000537585 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
SRGAP1-203ENST00000537585 LAPTM4BQ86VI4 370 aa11.72□□□□□ -0.53
SRGAP1-203ENST00000537585 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
SRGAP1-203ENST00000537585 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
SRGAP1-203ENST00000537585 SOWAHBA6NEL2 793 aa11.7□□□□□ -0.54
SRGAP1-203ENST00000537585 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
SRGAP1-203ENST00000537585 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
SRGAP1-203ENST00000537585 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
SRGAP1-203ENST00000537585 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
SRGAP1-203ENST00000537585 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
SRGAP1-203ENST00000537585 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
SRGAP1-203ENST00000537585 TATDN2Q93075 761 aa11.65□□□□□ -0.54
SRGAP1-203ENST00000537585 SAMD7Q7Z3H4 446 aa11.64□□□□□ -0.55
SRGAP1-203ENST00000537585 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
SRGAP1-203ENST00000537585 CERKQ8TCT0 537 aa11.63□□□□□ -0.55
SRGAP1-203ENST00000537585 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
SRGAP1-203ENST00000537585 HPS5Q9UPZ3 1129 aa11.63□□□□□ -0.55
SRGAP1-203ENST00000537585 PTGDRQ13258 359 aa11.61□□□□□ -0.55
SRGAP1-203ENST00000537585 LRCH3Q96II8 777 aa11.61□□□□□ -0.55
SRGAP1-203ENST00000537585 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
SRGAP1-203ENST00000537585 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
SRGAP1-203ENST00000537585 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
SRGAP1-203ENST00000537585 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
SRGAP1-203ENST00000537585 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
SRGAP1-203ENST00000537585 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
SRGAP1-203ENST00000537585 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
SRGAP1-203ENST00000537585 EYA1Q99502 592 aa11.55□□□□□ -0.56
SRGAP1-203ENST00000537585 RNF40O75150 1001 aa11.53□□□□□ -0.56
SRGAP1-203ENST00000537585 SWT1Q5T5J6 900 aaKnown RBP11.53□□□□□ -0.56
SRGAP1-203ENST00000537585 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
SRGAP1-203ENST00000537585 A0A0G2JS52 829 aa11.5□□□□□ -0.57
SRGAP1-203ENST00000537585 GPR37O15354 613 aa11.5□□□□□ -0.57
SRGAP1-203ENST00000537585 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
SRGAP1-203ENST00000537585 FECHP22830 423 aa11.49□□□□□ -0.57
SRGAP1-203ENST00000537585 APLP1P51693 650 aa11.49□□□□□ -0.57
SRGAP1-203ENST00000537585 PPP4CP60510 307 aa11.49□□□□□ -0.57
SRGAP1-203ENST00000537585 IFFO2Q5TF58 517 aa11.49□□□□□ -0.57
SRGAP1-203ENST00000537585 NYAP1Q6ZVC0 841 aa11.46□□□□□ -0.57
SRGAP1-203ENST00000537585 FCHSD2O94868 740 aa11.45□□□□□ -0.58
SRGAP1-203ENST00000537585 TJAP1Q5JTD0 557 aa11.44□□□□□ -0.58
SRGAP1-203ENST00000537585 MTRQ99707 1265 aa11.43□□□□□ -0.58
SRGAP1-203ENST00000537585 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
SRGAP1-203ENST00000537585 RCCD1A6NED2 376 aa11.41□□□□□ -0.58
SRGAP1-203ENST00000537585 KCNC4Q03721 635 aa11.41□□□□□ -0.58
SRGAP1-203ENST00000537585 NLRP7Q8WX94 980 aa11.41□□□□□ -0.58
SRGAP1-203ENST00000537585 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
SRGAP1-203ENST00000537585 TMEM134Q9H6X4 195 aa11.39□□□□□ -0.59
SRGAP1-203ENST00000537585 DNAJB2P25686 324 aa11.38□□□□□ -0.59
SRGAP1-203ENST00000537585 RBM46Q8TBY0 533 aaKnown RBP11.38□□□□□ -0.59
SRGAP1-203ENST00000537585 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
SRGAP1-203ENST00000537585 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
SRGAP1-203ENST00000537585 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
SRGAP1-203ENST00000537585 COPS2P61201 443 aa11.36□□□□□ -0.59
SRGAP1-203ENST00000537585 HIC1Q14526 733 aa11.36□□□□□ -0.59
SRGAP1-203ENST00000537585 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms