RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 FAM205CA6NFA0 338 aa14.6□□□□□ -0.07
LMO3-216ENST00000537568 KDM2AQ9Y2K7 1162 aa14.6□□□□□ -0.07
LMO3-216ENST00000537568 POTEB3A0JP26 581 aa14.59□□□□□ -0.07
LMO3-216ENST00000537568 POTEBQ6S5H4 581 aa14.59□□□□□ -0.07
LMO3-216ENST00000537568 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
LMO3-216ENST00000537568 HS3ST6Q96QI5 342 aa14.59□□□□□ -0.07
LMO3-216ENST00000537568 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
LMO3-216ENST00000537568 ZSWIM6Q9HCJ5 1215 aa14.58□□□□□ -0.08
LMO3-216ENST00000537568 RYDENQ9NUL5 291 aaKnown RBP14.58□□□□□ -0.08
LMO3-216ENST00000537568 SOGA1O94964 1423 aa14.58□□□□□ -0.08
LMO3-216ENST00000537568 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
LMO3-216ENST00000537568 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
LMO3-216ENST00000537568 MAPKBP1O60336 1514 aa14.56□□□□□ -0.08
LMO3-216ENST00000537568 TOP2AP11388 1531 aaKnown RBP14.54□□□□□ -0.08
LMO3-216ENST00000537568 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
LMO3-216ENST00000537568 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
LMO3-216ENST00000537568 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
LMO3-216ENST00000537568 ARSIQ5FYB1 569 aa14.51□□□□□ -0.09
LMO3-216ENST00000537568 ERBB3P21860 1342 aa14.49□□□□□ -0.09
LMO3-216ENST00000537568 TSPOAP1O95153 1857 aa14.49□□□□□ -0.09
LMO3-216ENST00000537568 COL17A1Q9UMD9 1497 aaPredicted RBP14.49□□□□□ -0.09
LMO3-216ENST00000537568 SHROOM2Q13796 1616 aa14.48□□□□□ -0.09
LMO3-216ENST00000537568 KHSRPQ92945 711 aaKnown RBP eCLIP14.48□□□□□ -0.09
LMO3-216ENST00000537568 GPHNQ9NQX3 736 aaPredicted RBP14.47□□□□□ -0.09
LMO3-216ENST00000537568 NUP160Q12769 1436 aa14.46□□□□□ -0.09
LMO3-216ENST00000537568 FOXK1P85037 733 aa14.45□□□□□ -0.1
LMO3-216ENST00000537568 VARS2Q5ST30 1063 aaKnown RBP14.45□□□□□ -0.1
LMO3-216ENST00000537568 SLC34A2O95436 690 aa14.44□□□□□ -0.1
LMO3-216ENST00000537568 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
LMO3-216ENST00000537568 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
LMO3-216ENST00000537568 FGD5Q6ZNL6 1462 aa14.43□□□□□ -0.1
LMO3-216ENST00000537568 DSG2Q14126 1118 aa14.42□□□□□ -0.1
LMO3-216ENST00000537568 KRTAP3-3Q9BYR6 98 aa14.42□□□□□ -0.1
LMO3-216ENST00000537568 KRTAP3-2Q9BYR7 98 aa14.42□□□□□ -0.1
LMO3-216ENST00000537568 SPATA31D1Q6ZQQ2 1576 aa14.42□□□□□ -0.1
LMO3-216ENST00000537568 PLPP6Q8IY26 295 aa14.41□□□□□ -0.1
LMO3-216ENST00000537568 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
LMO3-216ENST00000537568 PCDHGA4Q9Y5G9 962 aa14.41□□□□□ -0.1
LMO3-216ENST00000537568 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
LMO3-216ENST00000537568 PPRC1Q5VV67 1664 aaKnown RBP14.39□□□□□ -0.11
LMO3-216ENST00000537568 NUDT7P0C024 238 aa14.39□□□□□ -0.11
LMO3-216ENST00000537568 CRISPLD2Q9H0B8 497 aa14.39□□□□□ -0.11
LMO3-216ENST00000537568 ADCY10Q96PN6 1610 aa14.38□□□□□ -0.11
LMO3-216ENST00000537568 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
LMO3-216ENST00000537568 PRG4Q92954 1404 aaPredicted RBP14.36□□□□□ -0.11
LMO3-216ENST00000537568 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
LMO3-216ENST00000537568 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
LMO3-216ENST00000537568 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
LMO3-216ENST00000537568 SPNS2Q8IVW8 549 aa14.33□□□□□ -0.12
LMO3-216ENST00000537568 PTCD2Q8WV60 388 aaKnown RBP14.33□□□□□ -0.12
LMO3-216ENST00000537568 ZNF687Q8N1G0 1237 aa14.32□□□□□ -0.12
LMO3-216ENST00000537568 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
LMO3-216ENST00000537568 PDE4AP27815 886 aa14.3□□□□□ -0.12
LMO3-216ENST00000537568 PPP1R15BQ5SWA1 713 aa14.3□□□□□ -0.12
LMO3-216ENST00000537568 LHX6Q9UPM6 363 aa14.3□□□□□ -0.12
LMO3-216ENST00000537568 ABCA5Q8WWZ7 1642 aa14.28□□□□□ -0.12
LMO3-216ENST00000537568 CADPS2Q86UW7 1296 aa14.27□□□□□ -0.13
LMO3-216ENST00000537568 CUX1P39880 1505 aa14.26□□□□□ -0.13
LMO3-216ENST00000537568 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
LMO3-216ENST00000537568 JPH4Q96JJ6 628 aa14.25□□□□□ -0.13
LMO3-216ENST00000537568 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
LMO3-216ENST00000537568 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
LMO3-216ENST00000537568 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
LMO3-216ENST00000537568 PCF11O94913 1555 aaKnown RBP14.22□□□□□ -0.13
LMO3-216ENST00000537568 GLI2P10070 1586 aa14.22□□□□□ -0.13
LMO3-216ENST00000537568 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
LMO3-216ENST00000537568 DDX27Q96GQ7 796 aaKnown RBP14.22□□□□□ -0.13
LMO3-216ENST00000537568 TBC1D12O60347 775 aa14.21□□□□□ -0.13
LMO3-216ENST00000537568 PTPRMP28827 1452 aa14.2□□□□□ -0.14
LMO3-216ENST00000537568 MFSD10Q14728 455 aa14.2□□□□□ -0.14
LMO3-216ENST00000537568 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
LMO3-216ENST00000537568 NBR1Q14596 966 aa14.17□□□□□ -0.14
LMO3-216ENST00000537568 POTEEQ6S8J3 1075 aa14.15□□□□□ -0.14
LMO3-216ENST00000537568 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
LMO3-216ENST00000537568 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
LMO3-216ENST00000537568 PSDA5PKW4 1024 aaPredicted RBP14.13□□□□□ -0.15
LMO3-216ENST00000537568 HSPA2P54652 639 aa14.13□□□□□ -0.15
LMO3-216ENST00000537568 AXIN2Q9Y2T1 843 aa14.12□□□□□ -0.15
LMO3-216ENST00000537568 KIF21BO75037 1637 aa14.11□□□□□ -0.15
LMO3-216ENST00000537568 PBX2P40425 430 aa14.1□□□□□ -0.15
LMO3-216ENST00000537568 LSM11P83369 360 aaKnown RBP eCLIP14.1□□□□□ -0.15
LMO3-216ENST00000537568 ANKRD13DQ6ZTN6 518 aa14.1□□□□□ -0.15
LMO3-216ENST00000537568 MAP3K4Q9Y6R4 1608 aa14.1□□□□□ -0.15
LMO3-216ENST00000537568 ADAMTSL3P82987 1691 aa14.1□□□□□ -0.15
LMO3-216ENST00000537568 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
LMO3-216ENST00000537568 PLB1Q6P1J6 1458 aa14.09□□□□□ -0.15
LMO3-216ENST00000537568 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.16
LMO3-216ENST00000537568 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
LMO3-216ENST00000537568 EPRSP07814 1512 aaKnown RBP14.06□□□□□ -0.16
LMO3-216ENST00000537568 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
LMO3-216ENST00000537568 PPP4R3BQ5MIZ7 849 aa14.06□□□□□ -0.16
LMO3-216ENST00000537568 ARHGAP33O14559 1287 aa14.03□□□□□ -0.16
LMO3-216ENST00000537568 EVI5O60447 810 aa14.03□□□□□ -0.16
LMO3-216ENST00000537568 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
LMO3-216ENST00000537568 ZNF454Q8N9F8 522 aa14.01□□□□□ -0.17
LMO3-216ENST00000537568 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
LMO3-216ENST00000537568 CAMK2BQ13554 666 aa14□□□□□ -0.17
LMO3-216ENST00000537568 PSEN2P49810 448 aa13.99□□□□□ -0.17
LMO3-216ENST00000537568 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
LMO3-216ENST00000537568 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms