RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CD109Q6YHK3 1445 aa29.65■■■□□ 2.34
TRIM3-214ENST00000536344 DUOX2Q9NRD8 1548 aa29.64■■■□□ 2.33
TRIM3-214ENST00000536344 DCAF11Q8TEB1 546 aa29.64■■■□□ 2.33
TRIM3-214ENST00000536344 KDM5DQ9BY66 1539 aa29.63■■■□□ 2.33
TRIM3-214ENST00000536344 KIF3BO15066 747 aa29.61■■■□□ 2.33
TRIM3-214ENST00000536344 ZFYVE16Q7Z3T8 1539 aa29.6■■■□□ 2.33
TRIM3-214ENST00000536344 C11orf95C9JLR9 678 aaPredicted RBP29.6■■■□□ 2.33
TRIM3-214ENST00000536344 ARAP3Q8WWN8 1544 aa29.59■■■□□ 2.33
TRIM3-214ENST00000536344 WASHC2AQ641Q2 1341 aa29.57■■■□□ 2.32
TRIM3-214ENST00000536344 RAPGEF3O95398 923 aa29.57■■■□□ 2.32
TRIM3-214ENST00000536344 IRX6P78412 446 aaPredicted RBP29.56■■■□□ 2.32
TRIM3-214ENST00000536344 ERICH6Q7L0X2 663 aa29.56■■■□□ 2.32
TRIM3-214ENST00000536344 ERBINQ96RT1 1412 aa29.55■■■□□ 2.32
TRIM3-214ENST00000536344 UNC13BO14795 1591 aa29.55■■■□□ 2.32
TRIM3-214ENST00000536344 ATP7AQ04656 1500 aa29.54■■■□□ 2.32
TRIM3-214ENST00000536344 PLA2R1Q13018 1463 aa29.53■■■□□ 2.32
TRIM3-214ENST00000536344 CCDC144AA2RUR9 1427 aa29.53■■■□□ 2.32
TRIM3-214ENST00000536344 POLR3GLQ9BT43 218 aa29.53■■■□□ 2.32
TRIM3-214ENST00000536344 RIMBP3CA6NJZ7 1639 aa29.52■■■□□ 2.32
TRIM3-214ENST00000536344 RIMBP3BA6NNM3 1639 aa29.52■■■□□ 2.32
TRIM3-214ENST00000536344 RIMBP3Q9UFD9 1639 aa29.52■■■□□ 2.32
TRIM3-214ENST00000536344 FANCIQ9NVI1 1328 aa29.49■■■□□ 2.31
TRIM3-214ENST00000536344 RTEL1-TNFRSF6BF6WH68 1400 aa29.49■■■□□ 2.31
TRIM3-214ENST00000536344 IQGAP3Q86VI3 1631 aa29.46■■■□□ 2.31
TRIM3-214ENST00000536344 CNGB1Q14028 1251 aaPredicted RBP29.46■■■□□ 2.31
TRIM3-214ENST00000536344 INO80Q9ULG1 1556 aaPredicted RBP29.45■■■□□ 2.3
TRIM3-214ENST00000536344 DEKP35659 375 aaKnown RBP29.44■■■□□ 2.3
TRIM3-214ENST00000536344 FAM69CQ0P6D2 419 aa29.43■■■□□ 2.3
TRIM3-214ENST00000536344 CARD11Q9BXL7 1154 aa29.43■■■□□ 2.3
TRIM3-214ENST00000536344 ANP32CO43423 234 aa29.42■■■□□ 2.3
TRIM3-214ENST00000536344 GGT6Q6P531 493 aa29.42■■■□□ 2.3
TRIM3-214ENST00000536344 KIDINS220Q9ULH0 1771 aa29.4■■■□□ 2.3
TRIM3-214ENST00000536344 ZNF518AQ6AHZ1 1483 aa29.4■■■□□ 2.3
TRIM3-214ENST00000536344 MAGI2Q86UL8 1455 aa29.4■■■□□ 2.3
TRIM3-214ENST00000536344 DHX29Q7Z478 1369 aaKnown RBP29.39■■■□□ 2.3
TRIM3-214ENST00000536344 USP47Q96K76 1375 aa29.39■■■□□ 2.3
TRIM3-214ENST00000536344 NBPF1Q3BBV0 1214 aa29.36■■■□□ 2.29
TRIM3-214ENST00000536344 SPATA31E1Q6ZUB1 1445 aa29.35■■■□□ 2.29
TRIM3-214ENST00000536344 POGZQ7Z3K3 1410 aa29.35■■■□□ 2.29
TRIM3-214ENST00000536344 KIF7Q2M1P5 1343 aa29.35■■■□□ 2.29
TRIM3-214ENST00000536344 CCDC7Q96M83 1385 aa29.33■■■□□ 2.29
TRIM3-214ENST00000536344 E9PCH4 1651 aa29.33■■■□□ 2.29
TRIM3-214ENST00000536344 KANK1Q14678 1352 aa29.32■■■□□ 2.28
TRIM3-214ENST00000536344 ANO8Q9HCE9 1232 aaPredicted RBP29.31■■■□□ 2.28
TRIM3-214ENST00000536344 CFAP65Q6ZU64 1925 aaKnown RBP29.3■■■□□ 2.28
TRIM3-214ENST00000536344 A2MP01023 1474 aa29.3■■■□□ 2.28
TRIM3-214ENST00000536344 ST20-MTHFSA0A0A6YYL1 179 aa29.3■■■□□ 2.28
TRIM3-214ENST00000536344 ROCK2O75116 1388 aaKnown RBP29.3■■■□□ 2.28
TRIM3-214ENST00000536344 TSPOAP1O95153 1857 aa29.29■■■□□ 2.28
TRIM3-214ENST00000536344 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
TRIM3-214ENST00000536344 CCER2I3L3R5 266 aa29.27■■■□□ 2.28
TRIM3-214ENST00000536344 ATP10AO60312 1499 aa29.27■■■□□ 2.28
TRIM3-214ENST00000536344 RALGAPBQ86X10 1494 aa29.24■■■□□ 2.27
TRIM3-214ENST00000536344 UGGT1Q9NYU2 1555 aa29.23■■■□□ 2.27
TRIM3-214ENST00000536344 DEPDC5O75140 1603 aa29.23■■■□□ 2.27
TRIM3-214ENST00000536344 BCORL1Q5H9F3 1711 aa29.23■■■□□ 2.27
TRIM3-214ENST00000536344 MROH1Q8NDA8 1641 aa29.23■■■□□ 2.27
TRIM3-214ENST00000536344 CFAP74Q9C0B2 1584 aa29.23■■■□□ 2.27
TRIM3-214ENST00000536344 PRAG1Q86YV5 1406 aa29.23■■■□□ 2.27
TRIM3-214ENST00000536344 NBR1Q14596 966 aa29.22■■■□□ 2.27
TRIM3-214ENST00000536344 KDM5CP41229 1560 aa29.21■■■□□ 2.27
TRIM3-214ENST00000536344 CHGAP10645 457 aaKnown RBP29.21■■■□□ 2.27
TRIM3-214ENST00000536344 HECW2Q9P2P5 1572 aa29.2■■■□□ 2.26
TRIM3-214ENST00000536344 YEATS2Q9ULM3 1422 aa29.19■■■□□ 2.26
TRIM3-214ENST00000536344 ABCA6Q8N139 1617 aa29.19■■■□□ 2.26
TRIM3-214ENST00000536344 NEO1Q92859 1461 aa29.19■■■□□ 2.26
TRIM3-214ENST00000536344 FRMPD1Q5SYB0 1578 aa29.19■■■□□ 2.26
TRIM3-214ENST00000536344 HNRNPUQ00839 825 aaKnown RBP eCLIP29.18■■■□□ 2.26
TRIM3-214ENST00000536344 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
TRIM3-214ENST00000536344 WASHC2CQ9Y4E1 1318 aa29.18■■■□□ 2.26
TRIM3-214ENST00000536344 MAP3K4Q9Y6R4 1608 aa29.17■■■□□ 2.26
TRIM3-214ENST00000536344 CNTLNQ9NXG0 1405 aa29.17■■■□□ 2.26
TRIM3-214ENST00000536344 TET3O43151 1660 aa29.16■■■□□ 2.26
TRIM3-214ENST00000536344 SENP3Q9H4L4 574 aaPredicted RBP29.15■■■□□ 2.26
TRIM3-214ENST00000536344 CEP152O94986 1710 aa29.15■■■□□ 2.26
TRIM3-214ENST00000536344 CLTCL1P53675 1640 aa29.15■■■□□ 2.26
TRIM3-214ENST00000536344 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
TRIM3-214ENST00000536344 SPHKAPQ2M3C7 1700 aa29.15■■■□□ 2.26
TRIM3-214ENST00000536344 CCDC184Q52MB2 194 aa29.14■■■□□ 2.26
TRIM3-214ENST00000536344 VWDEQ8N2E2 1590 aa29.13■■■□□ 2.25
TRIM3-214ENST00000536344 EIF2AK4Q9P2K8 1649 aaKnown RBP29.12■■■□□ 2.25
TRIM3-214ENST00000536344 DIP2BQ9P265 1576 aa29.12■■■□□ 2.25
TRIM3-214ENST00000536344 TRPM2O94759 1503 aa29.11■■■□□ 2.25
TRIM3-214ENST00000536344 PTPRTO14522 1441 aa29.11■■■□□ 2.25
TRIM3-214ENST00000536344 PAK3O75914 559 aaPredicted RBP29.1■■■□□ 2.25
TRIM3-214ENST00000536344 PPRC1Q5VV67 1664 aaKnown RBP29.1■■■□□ 2.25
TRIM3-214ENST00000536344 TRPM1Q7Z4N2 1603 aa29.1■■■□□ 2.25
TRIM3-214ENST00000536344 RICTORQ6R327 1708 aa29.07■■■□□ 2.24
TRIM3-214ENST00000536344 NUTM2DQ5VT03 806 aaPredicted RBP29.05■■■□□ 2.24
TRIM3-214ENST00000536344 DIP2CQ9Y2E4 1556 aa29.05■■■□□ 2.24
TRIM3-214ENST00000536344 B4GALNT3Q6L9W6 998 aa29.05■■■□□ 2.24
TRIM3-214ENST00000536344 SALL2Q9Y467 1007 aaPredicted RBP29.05■■■□□ 2.24
TRIM3-214ENST00000536344 EFCAB6Q5THR3 1501 aa29.05■■■□□ 2.24
TRIM3-214ENST00000536344 PRKRIP1Q9H875 184 aaPredicted RBP29.04■■■□□ 2.24
TRIM3-214ENST00000536344 NPATQ14207 1427 aa29.04■■■□□ 2.24
TRIM3-214ENST00000536344 GLI2P10070 1586 aa29.02■■■□□ 2.24
TRIM3-214ENST00000536344 MLECQ14165 292 aa29.02■■■□□ 2.24
TRIM3-214ENST00000536344 ADGRF5Q8IZF2 1346 aa29■■■□□ 2.23
TRIM3-214ENST00000536344 POLR1AO95602 1720 aaPredicted RBP28.99■■■□□ 2.23
TRIM3-214ENST00000536344 RNF17Q9BXT8 1623 aaKnown RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms