RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PCF11O94913 1555 aaKnown RBP5.19□□□□□ -1.58
MCF2-210ENST00000536274 PRXQ9BXM0 1461 aa5.19□□□□□ -1.58
MCF2-210ENST00000536274 C19orf67A6NJJ6 358 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 KIF21BO75037 1637 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 RAPGEF6Q8TEU7 1601 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 FAM135AQ9P2D6 1515 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 EEA1Q15075 1411 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 FHOD3Q2V2M9 1422 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 PREX1Q8TCU6 1659 aa5.18□□□□□ -1.58
MCF2-210ENST00000536274 DDX10Q13206 875 aaKnown RBP5.17□□□□□ -1.58
MCF2-210ENST00000536274 NPM2Q86SE8 214 aaKnown RBP5.17□□□□□ -1.58
MCF2-210ENST00000536274 MROH2AA6NES4 1674 aa5.17□□□□□ -1.58
MCF2-210ENST00000536274 ARID4BQ4LE39 1312 aaPredicted RBP5.17□□□□□ -1.58
MCF2-210ENST00000536274 COL17A1Q9UMD9 1497 aaPredicted RBP5.16□□□□□ -1.58
MCF2-210ENST00000536274 RBM10P98175 930 aaKnown RBP5.16□□□□□ -1.58
MCF2-210ENST00000536274 NEFMP07197 916 aa5.16□□□□□ -1.58
MCF2-210ENST00000536274 BCL11BQ9C0K0 894 aaPredicted RBP5.16□□□□□ -1.58
MCF2-210ENST00000536274 FARP1Q9Y4F1 1045 aaPredicted RBP5.16□□□□□ -1.58
MCF2-210ENST00000536274 SIN3AQ96ST3 1273 aa5.15□□□□□ -1.58
MCF2-210ENST00000536274 FBXO3Q9UK99 471 aa5.15□□□□□ -1.58
MCF2-210ENST00000536274 CD109Q6YHK3 1445 aa5.15□□□□□ -1.59
MCF2-210ENST00000536274 FANCAO15360 1455 aa5.15□□□□□ -1.59
MCF2-210ENST00000536274 ARHGEF12Q9NZN5 1544 aa5.15□□□□□ -1.59
MCF2-210ENST00000536274 SENP3-EIF4A1A0A087X0R7 540 aa5.14□□□□□ -1.59
MCF2-210ENST00000536274 PTPRMP28827 1452 aa5.14□□□□□ -1.59
MCF2-210ENST00000536274 KDM5CP41229 1560 aa5.14□□□□□ -1.59
MCF2-210ENST00000536274 AGLP35573 1532 aa5.14□□□□□ -1.59
MCF2-210ENST00000536274 ILDR1Q86SU0 546 aaPredicted RBP5.14□□□□□ -1.59
MCF2-210ENST00000536274 FER1L4A9Z1Z3 1794 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 PDE4CQ08493 712 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 PROM2Q8N271 834 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 MADDQ8WXG6 1647 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 POGZQ7Z3K3 1410 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 ZNF142P52746 1687 aaPredicted RBP5.13□□□□□ -1.59
MCF2-210ENST00000536274 FBXO41Q8TF61 875 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 LMTK3Q96Q04 1460 aa5.13□□□□□ -1.59
MCF2-210ENST00000536274 ZFYVE16Q7Z3T8 1539 aa5.12□□□□□ -1.59
MCF2-210ENST00000536274 MYO5CQ9NQX4 1742 aa5.12□□□□□ -1.59
MCF2-210ENST00000536274 AAMPQ13685 434 aa5.11□□□□□ -1.59
MCF2-210ENST00000536274 ARXQ96QS3 562 aa5.11□□□□□ -1.59
MCF2-210ENST00000536274 AKNAQ7Z591 1439 aa5.11□□□□□ -1.59
MCF2-210ENST00000536274 TULP1O00294 542 aaPredicted RBP5.11□□□□□ -1.59
MCF2-210ENST00000536274 CD44P16070 742 aaKnown RBP5.11□□□□□ -1.59
MCF2-210ENST00000536274 FGD1P98174 961 aa5.11□□□□□ -1.59
MCF2-210ENST00000536274 KDM2AQ9Y2K7 1162 aa5.11□□□□□ -1.59
MCF2-210ENST00000536274 RIMS1Q86UR5 1692 aaKnown RBP5.11□□□□□ -1.59
MCF2-210ENST00000536274 ATP10BO94823 1461 aa5.11□□□□□ -1.59
MCF2-210ENST00000536274 PTPRTO14522 1441 aa5.1□□□□□ -1.59
MCF2-210ENST00000536274 HECW1Q76N89 1606 aa5.1□□□□□ -1.59
MCF2-210ENST00000536274 IPO9Q96P70 1041 aaKnown RBP5.1□□□□□ -1.59
MCF2-210ENST00000536274 WASHC2AQ641Q2 1341 aa5.1□□□□□ -1.59
MCF2-210ENST00000536274 DCAF11Q8TEB1 546 aa5.1□□□□□ -1.59
MCF2-210ENST00000536274 HNRNPUQ00839 825 aaKnown RBP eCLIP5.1□□□□□ -1.59
MCF2-210ENST00000536274 FRAT1Q92837 279 aaPredicted RBP5.1□□□□□ -1.59
MCF2-210ENST00000536274 DENND4BO75064 1496 aaPredicted RBP5.09□□□□□ -1.59
MCF2-210ENST00000536274 RANGAP1P46060 587 aaPredicted RBP5.09□□□□□ -1.59
MCF2-210ENST00000536274 SLC4A3P48751 1232 aa5.09□□□□□ -1.59
MCF2-210ENST00000536274 GLIPR1L2Q4G1C9 344 aa5.09□□□□□ -1.59
MCF2-210ENST00000536274 CREBZFQ9NS37 354 aa5.09□□□□□ -1.59
MCF2-210ENST00000536274 ANP32AP39687 249 aaKnown RBP5.09□□□□□ -1.6
MCF2-210ENST00000536274 ZNF579Q8NAF0 562 aaKnown RBP5.09□□□□□ -1.6
MCF2-210ENST00000536274 C9orf84Q5VXU9 1444 aa5.08□□□□□ -1.6
MCF2-210ENST00000536274 NUP153P49790 1475 aaKnown RBP5.08□□□□□ -1.6
MCF2-210ENST00000536274 ITSN2Q9NZM3 1697 aa5.08□□□□□ -1.6
MCF2-210ENST00000536274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.08□□□□□ -1.6
MCF2-210ENST00000536274 RSPH6AQ9H0K4 717 aa5.08□□□□□ -1.6
MCF2-210ENST00000536274 WASHC2CQ9Y4E1 1318 aa5.08□□□□□ -1.6
MCF2-210ENST00000536274 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
MCF2-210ENST00000536274 RGS3P49796 1198 aa5.07□□□□□ -1.6
MCF2-210ENST00000536274 CHADLQ6NUI6 762 aa5.07□□□□□ -1.6
MCF2-210ENST00000536274 SETD1BQ9UPS6 1966 aaKnown RBP5.07□□□□□ -1.6
MCF2-210ENST00000536274 CNTLNQ9NXG0 1405 aa5.07□□□□□ -1.6
MCF2-210ENST00000536274 RRAGDQ9NQL2 400 aaPredicted RBP5.07□□□□□ -1.6
MCF2-210ENST00000536274 NPATQ14207 1427 aa5.07□□□□□ -1.6
MCF2-210ENST00000536274 PDIA4P13667 645 aaKnown RBP5.07□□□□□ -1.6
MCF2-210ENST00000536274 HSP90AA2PQ14568 343 aaPredicted RBP5.07□□□□□ -1.6
MCF2-210ENST00000536274 NAP1L5Q96NT1 182 aaPredicted RBP5.07□□□□□ -1.6
MCF2-210ENST00000536274 KIF14Q15058 1648 aa5.07□□□□□ -1.6
MCF2-210ENST00000536274 MLH3Q9UHC1 1453 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 STRCQ7RTU9 1775 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 GSE1Q14687 1217 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 PPP4R2Q9NY27 417 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 ZRANB1Q9UGI0 708 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 PLA2R1Q13018 1463 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 SKAP1Q86WV1 359 aa5.06□□□□□ -1.6
MCF2-210ENST00000536274 ATP10AO60312 1499 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 ZNF518AQ6AHZ1 1483 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 PLCD3Q8N3E9 789 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 SIGLEC1Q9BZZ2 1709 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 DIP2CQ9Y2E4 1556 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 PLCH2O75038 1416 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 PLXNC1O60486 1568 aa5.05□□□□□ -1.6
MCF2-210ENST00000536274 CNGB1Q14028 1251 aaPredicted RBP5.04□□□□□ -1.6
MCF2-210ENST00000536274 ARID3AQ99856 593 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 CCDC18Q5T9S5 1454 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 GABBR2O75899 941 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 C3P01024 1663 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 SPATA31D1Q6ZQQ2 1576 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 ABCC1P33527 1531 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 PAXIP1Q6ZW49 1069 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms