RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
CRNKL1-207ENST00000536226 PHLDB1Q86UU1 1377 aa10.35□□□□□ -0.75
CRNKL1-207ENST00000536226 E9PSI1 815 aa10.35□□□□□ -0.75
CRNKL1-207ENST00000536226 CENPJQ9HC77 1338 aaPredicted RBP10.35□□□□□ -0.75
CRNKL1-207ENST00000536226 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
CRNKL1-207ENST00000536226 CLCN1P35523 988 aa10.35□□□□□ -0.75
CRNKL1-207ENST00000536226 GTF2E1P29083 439 aaPredicted RBP10.34□□□□□ -0.75
CRNKL1-207ENST00000536226 HDAC5Q9UQL6 1122 aa10.34□□□□□ -0.75
CRNKL1-207ENST00000536226 SYNJ2O15056 1496 aa10.34□□□□□ -0.75
CRNKL1-207ENST00000536226 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
CRNKL1-207ENST00000536226 CALRP27797 417 aaKnown RBP10.34□□□□□ -0.75
CRNKL1-207ENST00000536226 PRDM10Q9NQV6 1147 aa10.34□□□□□ -0.75
CRNKL1-207ENST00000536226 ZNF622Q969S3 477 aaKnown RBP eCLIP10.33□□□□□ -0.764e-8■■□□□ 12.8
CRNKL1-207ENST00000536226 KIAA0586Q9BVV6 1533 aa10.33□□□□□ -0.76
CRNKL1-207ENST00000536226 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
CRNKL1-207ENST00000536226 TCERG1O14776 1098 aaKnown RBP10.32□□□□□ -0.76
CRNKL1-207ENST00000536226 CLSTN1O94985 981 aa10.32□□□□□ -0.76
CRNKL1-207ENST00000536226 ZNF526Q8TF50 670 aaPredicted RBP10.32□□□□□ -0.76
CRNKL1-207ENST00000536226 HECW1Q76N89 1606 aa10.32□□□□□ -0.76
CRNKL1-207ENST00000536226 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
CRNKL1-207ENST00000536226 DNAJC2Q99543 621 aaKnown RBP10.31□□□□□ -0.76
CRNKL1-207ENST00000536226 MAPKBP1O60336 1514 aa10.31□□□□□ -0.76
CRNKL1-207ENST00000536226 RAPGEF6Q8TEU7 1601 aa10.31□□□□□ -0.76
CRNKL1-207ENST00000536226 LETM1O95202 739 aaPredicted RBP10.3□□□□□ -0.76
CRNKL1-207ENST00000536226 KIF20AO95235 890 aa10.3□□□□□ -0.76
CRNKL1-207ENST00000536226 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
CRNKL1-207ENST00000536226 PSMD1Q99460 953 aa10.3□□□□□ -0.76
CRNKL1-207ENST00000536226 ABCA8O94911 1581 aa10.3□□□□□ -0.76
CRNKL1-207ENST00000536226 KIAA1211Q6ZU35 1233 aa10.3□□□□□ -0.76
CRNKL1-207ENST00000536226 NUP153P49790 1475 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-207ENST00000536226 OS9Q13438 667 aaPredicted RBP10.29□□□□□ -0.76
CRNKL1-207ENST00000536226 TSPYL1Q9H0U9 437 aa10.29□□□□□ -0.76
CRNKL1-207ENST00000536226 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.29□□□□□ -0.76
CRNKL1-207ENST00000536226 EHBP1L1Q8N3D4 1523 aa10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 UPF2Q9HAU5 1272 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 GCC2Q8IWJ2 1684 aa10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 PTPRKQ15262 1439 aa10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 GTPBP4Q9BZE4 634 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
CRNKL1-207ENST00000536226 CGNQ9P2M7 1197 aaKnown RBP10.27□□□□□ -0.76
CRNKL1-207ENST00000536226 ESPNB1AK53 854 aa10.27□□□□□ -0.77
CRNKL1-207ENST00000536226 CROCC2H7BZ55 1655 aa10.27□□□□□ -0.77
CRNKL1-207ENST00000536226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.27□□□□□ -0.77
CRNKL1-207ENST00000536226 DENND4BO75064 1496 aaPredicted RBP10.26□□□□□ -0.77
CRNKL1-207ENST00000536226 KDM6BO15054 1643 aa10.26□□□□□ -0.77
CRNKL1-207ENST00000536226 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
CRNKL1-207ENST00000536226 PTPN23Q9H3S7 1636 aa10.25□□□□□ -0.77
CRNKL1-207ENST00000536226 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
CRNKL1-207ENST00000536226 KIF14Q15058 1648 aa10.24□□□□□ -0.77
CRNKL1-207ENST00000536226 CDC42BPAQ5VT25 1732 aa10.24□□□□□ -0.77
CRNKL1-207ENST00000536226 UTP14CQ5TAP6 766 aaKnown RBP10.24□□□□□ -0.77
CRNKL1-207ENST00000536226 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
CRNKL1-207ENST00000536226 CCNB3Q8WWL7 1395 aa10.24□□□□□ -0.77
CRNKL1-207ENST00000536226 CCDC18Q5T9S5 1454 aa10.24□□□□□ -0.77
CRNKL1-207ENST00000536226 DHX57Q6P158 1386 aaKnown RBP10.23□□□□□ -0.77
CRNKL1-207ENST00000536226 TICAM2Q86XR7 235 aa10.23□□□□□ -0.77
CRNKL1-207ENST00000536226 NCOA2Q15596 1464 aa10.23□□□□□ -0.77
CRNKL1-207ENST00000536226 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
CRNKL1-207ENST00000536226 KDM5BQ9UGL1 1544 aa10.22□□□□□ -0.77
CRNKL1-207ENST00000536226 R3HCC1Q9Y3T6 440 aaKnown RBP10.22□□□□□ -0.77
CRNKL1-207ENST00000536226 MRE11P49959 708 aa10.22□□□□□ -0.77
CRNKL1-207ENST00000536226 GOLGA6L6A8MZA4 724 aa10.21□□□□□ -0.78
CRNKL1-207ENST00000536226 PDE4AP27815 886 aa10.21□□□□□ -0.78
CRNKL1-207ENST00000536226 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.78
CRNKL1-207ENST00000536226 FGD6Q6ZV73 1430 aa10.2□□□□□ -0.78
CRNKL1-207ENST00000536226 CHAF1AQ13111 956 aaPredicted RBP10.2□□□□□ -0.78
CRNKL1-207ENST00000536226 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
CRNKL1-207ENST00000536226 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
CRNKL1-207ENST00000536226 SSR1P43307 286 aaKnown RBP10.2□□□□□ -0.78
CRNKL1-207ENST00000536226 PRDM4Q9UKN5 801 aa10.2□□□□□ -0.78
CRNKL1-207ENST00000536226 MCCP23508 829 aa10.19□□□□□ -0.78
CRNKL1-207ENST00000536226 LMOD3Q0VAK6 560 aa10.19□□□□□ -0.78
CRNKL1-207ENST00000536226 KCNJ4P48050 445 aa10.19□□□□□ -0.78
CRNKL1-207ENST00000536226 RALBP1Q15311 655 aa10.19□□□□□ -0.78
CRNKL1-207ENST00000536226 GOLGA6L1Q8N7Z2 621 aa10.19□□□□□ -0.78
CRNKL1-207ENST00000536226 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
CRNKL1-207ENST00000536226 GOLGA6L22H0YM25 854 aa10.18□□□□□ -0.78
CRNKL1-207ENST00000536226 FRAT2O75474 233 aaPredicted RBP10.18□□□□□ -0.78
CRNKL1-207ENST00000536226 PLB1Q6P1J6 1458 aa10.18□□□□□ -0.78
CRNKL1-207ENST00000536226 CDC42BPBQ9Y5S2 1711 aa10.18□□□□□ -0.78
CRNKL1-207ENST00000536226 PHF14O94880 888 aa10.17□□□□□ -0.78
CRNKL1-207ENST00000536226 DMTNQ08495 405 aa10.17□□□□□ -0.78
CRNKL1-207ENST00000536226 FAM9BQ8IZU0 186 aa10.17□□□□□ -0.78
CRNKL1-207ENST00000536226 MS4A1P11836 297 aa10.17□□□□□ -0.78
CRNKL1-207ENST00000536226 UQCRHLA0A096LP55 91 aa10.17□□□□□ -0.78
CRNKL1-207ENST00000536226 UQCRHP07919 91 aa10.17□□□□□ -0.78
CRNKL1-207ENST00000536226 MYOM3Q5VTT5 1437 aa10.16□□□□□ -0.78
CRNKL1-207ENST00000536226 P3H3Q8IVL6 736 aa10.16□□□□□ -0.78
CRNKL1-207ENST00000536226 ABCC10Q5T3U5 1492 aa10.16□□□□□ -0.78
CRNKL1-207ENST00000536226 ZNF830Q96NB3 372 aaPredicted RBP10.16□□□□□ -0.78
CRNKL1-207ENST00000536226 KIF3AQ9Y496 699 aa10.16□□□□□ -0.78
CRNKL1-207ENST00000536226 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
CRNKL1-207ENST00000536226 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.78
CRNKL1-207ENST00000536226 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
CRNKL1-207ENST00000536226 TIGD1Q96MW7 591 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms