RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
VBP1-203ENST00000535916 COL9A1P20849 921 aa13.63□□□□□ -0.23
VBP1-203ENST00000535916 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
VBP1-203ENST00000535916 PDIA6Q15084 440 aa13.62□□□□□ -0.23
VBP1-203ENST00000535916 EPAS1Q99814 870 aa13.62□□□□□ -0.23
VBP1-203ENST00000535916 PROX2Q3B8N5 592 aa13.6□□□□□ -0.23
VBP1-203ENST00000535916 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
VBP1-203ENST00000535916 C6orf132Q5T0Z8 1188 aa13.57□□□□□ -0.24
VBP1-203ENST00000535916 SPDYE16A6NNV3 312 aaPredicted RBP13.56□□□□□ -0.24
VBP1-203ENST00000535916 MRPL50Q8N5N7 158 aaKnown RBP13.56□□□□□ -0.24
VBP1-203ENST00000535916 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
VBP1-203ENST00000535916 NBR1Q14596 966 aa13.55□□□□□ -0.24
VBP1-203ENST00000535916 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
VBP1-203ENST00000535916 ARIH1Q9Y4X5 557 aaPredicted RBP13.55□□□□□ -0.24
VBP1-203ENST00000535916 GOLGA8CPA6NN73 597 aa13.53□□□□□ -0.24
VBP1-203ENST00000535916 PTPN5P54829 565 aa13.52□□□□□ -0.25
VBP1-203ENST00000535916 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.25
VBP1-203ENST00000535916 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
VBP1-203ENST00000535916 THSD4Q6ZMP0 1018 aa13.5□□□□□ -0.25
VBP1-203ENST00000535916 WNT2BQ93097 391 aa13.5□□□□□ -0.25
VBP1-203ENST00000535916 MAP3K7O43318 606 aa13.49□□□□□ -0.25
VBP1-203ENST00000535916 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
VBP1-203ENST00000535916 KIAA1468Q9P260 1216 aa13.48□□□□□ -0.25
VBP1-203ENST00000535916 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
VBP1-203ENST00000535916 PRIM1P49642 420 aaKnown RBP13.46□□□□□ -0.25
VBP1-203ENST00000535916 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
VBP1-203ENST00000535916 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
VBP1-203ENST00000535916 SEPT9Q9UHD8 586 aaPredicted RBP13.43□□□□□ -0.26
VBP1-203ENST00000535916 LAPTM4BQ86VI4 370 aa13.41□□□□□ -0.26
VBP1-203ENST00000535916 ANKK1Q8NFD2 765 aa13.41□□□□□ -0.26
VBP1-203ENST00000535916 OSBPP22059 807 aa13.38□□□□□ -0.27
VBP1-203ENST00000535916 IRX2Q9BZI1 471 aaPredicted RBP13.38□□□□□ -0.27
VBP1-203ENST00000535916 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
VBP1-203ENST00000535916 BCAMP50895 628 aa13.37□□□□□ -0.27
VBP1-203ENST00000535916 ZFRQ96KR1 1074 aaKnown RBP13.37□□□□□ -0.27
VBP1-203ENST00000535916 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
VBP1-203ENST00000535916 CDHR5Q9HBB8 845 aa13.36□□□□□ -0.27
VBP1-203ENST00000535916 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
VBP1-203ENST00000535916 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
VBP1-203ENST00000535916 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
VBP1-203ENST00000535916 ARHGEF1Q92888 912 aaKnown RBP13.33□□□□□ -0.28
VBP1-203ENST00000535916 RGS20O76081 388 aa13.32□□□□□ -0.28
VBP1-203ENST00000535916 PRSS12P56730 875 aa13.32□□□□□ -0.28
VBP1-203ENST00000535916 PACS2Q86VP3 889 aa13.32□□□□□ -0.28
VBP1-203ENST00000535916 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
VBP1-203ENST00000535916 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
VBP1-203ENST00000535916 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
VBP1-203ENST00000535916 SMAPO00193 183 aa13.28□□□□□ -0.28
VBP1-203ENST00000535916 MLLT3P42568 568 aaPredicted RBP13.28□□□□□ -0.28
VBP1-203ENST00000535916 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
VBP1-203ENST00000535916 WBP1LQ9NX94 342 aa13.26□□□□□ -0.29
VBP1-203ENST00000535916 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
VBP1-203ENST00000535916 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
VBP1-203ENST00000535916 TATDN2Q93075 761 aa13.23□□□□□ -0.29
VBP1-203ENST00000535916 NPDC1Q9NQX5 325 aaPredicted RBP13.23□□□□□ -0.29
VBP1-203ENST00000535916 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
VBP1-203ENST00000535916 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
VBP1-203ENST00000535916 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
VBP1-203ENST00000535916 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
VBP1-203ENST00000535916 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
VBP1-203ENST00000535916 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
VBP1-203ENST00000535916 TSR3Q9UJK0 312 aaKnown RBP13.2□□□□□ -0.3
VBP1-203ENST00000535916 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
VBP1-203ENST00000535916 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
VBP1-203ENST00000535916 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
VBP1-203ENST00000535916 NYAP1Q6ZVC0 841 aa13.18□□□□□ -0.3
VBP1-203ENST00000535916 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
VBP1-203ENST00000535916 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
VBP1-203ENST00000535916 A0A0G2JS52 829 aa13.15□□□□□ -0.3
VBP1-203ENST00000535916 SEMA3EO15041 775 aa13.13□□□□□ -0.31
VBP1-203ENST00000535916 PPP4CP60510 307 aa13.13□□□□□ -0.31
VBP1-203ENST00000535916 PTGDRQ13258 359 aa13.09□□□□□ -0.31
VBP1-203ENST00000535916 RNF40O75150 1001 aa13.08□□□□□ -0.32
VBP1-203ENST00000535916 HAP1P54257 671 aaPredicted RBP13.08□□□□□ -0.32
VBP1-203ENST00000535916 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
VBP1-203ENST00000535916 KCNC4Q03721 635 aa13.07□□□□□ -0.32
VBP1-203ENST00000535916 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
VBP1-203ENST00000535916 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
VBP1-203ENST00000535916 Q6ZNB5 142 aa13.05□□□□□ -0.32
VBP1-203ENST00000535916 EYA1Q99502 592 aa13.05□□□□□ -0.32
VBP1-203ENST00000535916 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
VBP1-203ENST00000535916 APLP1P51693 650 aa12.99□□□□□ -0.33
VBP1-203ENST00000535916 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
VBP1-203ENST00000535916 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
VBP1-203ENST00000535916 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
VBP1-203ENST00000535916 FCHSD2O94868 740 aa12.98□□□□□ -0.33
VBP1-203ENST00000535916 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
VBP1-203ENST00000535916 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
VBP1-203ENST00000535916 MTRQ99707 1265 aa12.97□□□□□ -0.33
VBP1-203ENST00000535916 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
VBP1-203ENST00000535916 DNAJB2P25686 324 aa12.95□□□□□ -0.34
VBP1-203ENST00000535916 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
VBP1-203ENST00000535916 IL21Q9HBE4 155 aa12.93□□□□□ -0.34
VBP1-203ENST00000535916 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
VBP1-203ENST00000535916 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
VBP1-203ENST00000535916 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
VBP1-203ENST00000535916 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
VBP1-203ENST00000535916 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
VBP1-203ENST00000535916 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
VBP1-203ENST00000535916 HIC1Q14526 733 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms