RNA–Protein interactions for RNA: ENST00000535887.1

C12orf4-204, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-204ENST00000535887 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
C12orf4-204ENST00000535887 ZDHHC16Q969W1 377 aa13.92□□□□□ -0.18
C12orf4-204ENST00000535887 ARIH1Q9Y4X5 557 aaPredicted RBP13.92□□□□□ -0.18
C12orf4-204ENST00000535887 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
C12orf4-204ENST00000535887 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
C12orf4-204ENST00000535887 A0A0G2JS52 829 aa13.87□□□□□ -0.19
C12orf4-204ENST00000535887 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
C12orf4-204ENST00000535887 RGS20O76081 388 aa13.84□□□□□ -0.19
C12orf4-204ENST00000535887 PROX2Q3B8N5 592 aa13.84□□□□□ -0.19
C12orf4-204ENST00000535887 PCDHGA10Q9Y5H3 936 aa13.84□□□□□ -0.19
C12orf4-204ENST00000535887 COL9A1P20849 921 aa13.83□□□□□ -0.2
C12orf4-204ENST00000535887 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
C12orf4-204ENST00000535887 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
C12orf4-204ENST00000535887 PPP1R3GB7ZBB8 358 aa13.79□□□□□ -0.2
C12orf4-204ENST00000535887 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
C12orf4-204ENST00000535887 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
C12orf4-204ENST00000535887 IRX2Q9BZI1 471 aaPredicted RBP13.78□□□□□ -0.2
C12orf4-204ENST00000535887 RABGEF1Q9UJ41 708 aa13.77□□□□□ -0.21
C12orf4-204ENST00000535887 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
C12orf4-204ENST00000535887 DPYSL4O14531 572 aa13.75□□□□□ -0.21
C12orf4-204ENST00000535887 BCAMP50895 628 aa13.75□□□□□ -0.21
C12orf4-204ENST00000535887 PDIA6Q15084 440 aa13.73□□□□□ -0.21
C12orf4-204ENST00000535887 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
C12orf4-204ENST00000535887 ITGBL1O95965 494 aaPredicted RBP13.71□□□□□ -0.21
C12orf4-204ENST00000535887 ANKK1Q8NFD2 765 aa13.71□□□□□ -0.21
C12orf4-204ENST00000535887 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
C12orf4-204ENST00000535887 PHF14O94880 888 aa13.69□□□□□ -0.22
C12orf4-204ENST00000535887 KIAA1468Q9P260 1216 aa13.69□□□□□ -0.22
C12orf4-204ENST00000535887 SOWAHBA6NEL2 793 aa13.67□□□□□ -0.22
C12orf4-204ENST00000535887 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
C12orf4-204ENST00000535887 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
C12orf4-204ENST00000535887 LAPTM4BQ86VI4 370 aa13.64□□□□□ -0.23
C12orf4-204ENST00000535887 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
C12orf4-204ENST00000535887 SEPT9Q9UHD8 586 aaPredicted RBP13.64□□□□□ -0.23
C12orf4-204ENST00000535887 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
C12orf4-204ENST00000535887 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
C12orf4-204ENST00000535887 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
C12orf4-204ENST00000535887 EPAS1Q99814 870 aa13.59□□□□□ -0.23
C12orf4-204ENST00000535887 TRIM6-TRIM34B2RNG4 842 aa13.57□□□□□ -0.24
C12orf4-204ENST00000535887 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
C12orf4-204ENST00000535887 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
C12orf4-204ENST00000535887 KCNC4Q03721 635 aa13.53□□□□□ -0.24
C12orf4-204ENST00000535887 DDX12PQ92771 950 aa13.53□□□□□ -0.24
C12orf4-204ENST00000535887 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
C12orf4-204ENST00000535887 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
C12orf4-204ENST00000535887 Q6ZNB5 142 aa13.49□□□□□ -0.25
C12orf4-204ENST00000535887 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.49□□□□□ -0.25
C12orf4-204ENST00000535887 TSR3Q9UJK0 312 aaKnown RBP13.49□□□□□ -0.25
C12orf4-204ENST00000535887 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
C12orf4-204ENST00000535887 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
C12orf4-204ENST00000535887 SEMA3EO15041 775 aa13.47□□□□□ -0.25
C12orf4-204ENST00000535887 OSBPP22059 807 aa13.47□□□□□ -0.25
C12orf4-204ENST00000535887 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
C12orf4-204ENST00000535887 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
C12orf4-204ENST00000535887 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
C12orf4-204ENST00000535887 LCE2BO14633 110 aa13.45□□□□□ -0.26
C12orf4-204ENST00000535887 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
C12orf4-204ENST00000535887 NBR1Q14596 966 aa13.44□□□□□ -0.26
C12orf4-204ENST00000535887 MLLT3P42568 568 aaPredicted RBP13.43□□□□□ -0.26
C12orf4-204ENST00000535887 SMYD5Q6GMV2 418 aa13.43□□□□□ -0.26
C12orf4-204ENST00000535887 FAM198AQ9UFP1 575 aa13.41□□□□□ -0.26
C12orf4-204ENST00000535887 C3orf80F5H4A9 247 aa13.4□□□□□ -0.26
C12orf4-204ENST00000535887 SMAPO00193 183 aa13.4□□□□□ -0.26
C12orf4-204ENST00000535887 MAP3K7O43318 606 aa13.39□□□□□ -0.27
C12orf4-204ENST00000535887 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
C12orf4-204ENST00000535887 TJAP1Q5JTD0 557 aa13.38□□□□□ -0.27
C12orf4-204ENST00000535887 PACS2Q86VP3 889 aa13.38□□□□□ -0.27
C12orf4-204ENST00000535887 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
C12orf4-204ENST00000535887 PPP4CP60510 307 aa13.35□□□□□ -0.27
C12orf4-204ENST00000535887 SAMD7Q7Z3H4 446 aa13.35□□□□□ -0.27
C12orf4-204ENST00000535887 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
C12orf4-204ENST00000535887 GFRA3O60609 400 aa13.31□□□□□ -0.28
C12orf4-204ENST00000535887 PRSS12P56730 875 aa13.31□□□□□ -0.28
C12orf4-204ENST00000535887 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
C12orf4-204ENST00000535887 MTRQ99707 1265 aa13.29□□□□□ -0.28
C12orf4-204ENST00000535887 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
C12orf4-204ENST00000535887 NPDC1Q9NQX5 325 aaPredicted RBP13.28□□□□□ -0.28
C12orf4-204ENST00000535887 LAPTM4AQ15012 233 aa13.27□□□□□ -0.29
C12orf4-204ENST00000535887 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
C12orf4-204ENST00000535887 PPP1R18Q6NYC8 613 aa13.26□□□□□ -0.29
C12orf4-204ENST00000535887 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
C12orf4-204ENST00000535887 TATDN2Q93075 761 aa13.26□□□□□ -0.29
C12orf4-204ENST00000535887 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
C12orf4-204ENST00000535887 CDHR5Q9HBB8 845 aa13.25□□□□□ -0.29
C12orf4-204ENST00000535887 PNMA3Q9UL41 463 aa13.24□□□□□ -0.29
C12orf4-204ENST00000535887 PTGDRQ13258 359 aa13.23□□□□□ -0.29
C12orf4-204ENST00000535887 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
C12orf4-204ENST00000535887 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
C12orf4-204ENST00000535887 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
C12orf4-204ENST00000535887 APLP1P51693 650 aa13.21□□□□□ -0.29
C12orf4-204ENST00000535887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
C12orf4-204ENST00000535887 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
C12orf4-204ENST00000535887 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
C12orf4-204ENST00000535887 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
C12orf4-204ENST00000535887 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
C12orf4-204ENST00000535887 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
C12orf4-204ENST00000535887 FCHSD2O94868 740 aa13.18□□□□□ -0.3
C12orf4-204ENST00000535887 BCANQ96GW7 911 aa13.18□□□□□ -0.3
C12orf4-204ENST00000535887 RNF40O75150 1001 aa13.16□□□□□ -0.3
C12orf4-204ENST00000535887 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms