RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-204	ENST00000535147	ADCY10	Q96PN6	1610 aa		13.76	□□□□□ -0.21
DDB1-204	ENST00000535147	EXOC6	Q8TAG9	804 aa		13.76	□□□□□ -0.21
DDB1-204	ENST00000535147	BRD4	O60885	1362 aa	Predicted RBP	13.75	□□□□□ -0.21
DDB1-204	ENST00000535147	ANP32A	P39687	249 aa	Known RBP	13.75	□□□□□ -0.21
DDB1-204	ENST00000535147	CARMIL2	Q6F5E8	1435 aa		13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	RALBP1	Q15311	655 aa		13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	RGL3	Q3MIN7	710 aa		13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	ARHGEF12	Q9NZN5	1544 aa		13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	RRP1	P56182	461 aa	Known RBP	13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	IPO9	Q96P70	1041 aa	Known RBP	13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	CDC42BPA	Q5VT25	1732 aa		13.74	□□□□□ -0.21
DDB1-204	ENST00000535147	ABCC10	Q5T3U5	1492 aa		13.73	□□□□□ -0.21
DDB1-204	ENST00000535147	NBPF1	Q3BBV0	1214 aa		13.73	□□□□□ -0.21
DDB1-204	ENST00000535147	ATP10B	O94823	1461 aa		13.72	□□□□□ -0.21
DDB1-204	ENST00000535147	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.72	□□□□□ -0.21
DDB1-204	ENST00000535147	RCAN3	Q9UKA8	241 aa		13.72	□□□□□ -0.21
DDB1-204	ENST00000535147	SYNJ2	O15056	1496 aa		13.72	□□□□□ -0.21
DDB1-204	ENST00000535147	KCNA4	P22459	653 aa		13.71	□□□□□ -0.21
DDB1-204	ENST00000535147	CDCA7L	Q96GN5	454 aa		13.71	□□□□□ -0.21
DDB1-204	ENST00000535147	MYT1L	Q9UL68	1186 aa		13.71	□□□□□ -0.21
DDB1-204	ENST00000535147	SHANK2	Q9UPX8	1470 aa		13.71	□□□□□ -0.22
DDB1-204	ENST00000535147	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.71	□□□□□ -0.22
DDB1-204	ENST00000535147	NPM2	Q86SE8	214 aa	Known RBP	13.7	□□□□□ -0.22
DDB1-204	ENST00000535147	NLRP13	Q86W25	1043 aa		13.7	□□□□□ -0.22
DDB1-204	ENST00000535147	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.7	□□□□□ -0.22
DDB1-204	ENST00000535147	CC2D1B	Q5T0F9	858 aa	Known RBP	13.69	□□□□□ -0.22
DDB1-204	ENST00000535147	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
DDB1-204	ENST00000535147	PTPRG	P23470	1445 aa		13.69	□□□□□ -0.22
DDB1-204	ENST00000535147	KTN1	Q86UP2	1357 aa	Known RBP	13.68	□□□□□ -0.22
DDB1-204	ENST00000535147	KDM5D	Q9BY66	1539 aa		13.68	□□□□□ -0.22
DDB1-204	ENST00000535147	PER1	O15534	1290 aa	Predicted RBP	13.68	□□□□□ -0.22
DDB1-204	ENST00000535147	PARD3	Q8TEW0	1356 aa		13.67	□□□□□ -0.22
DDB1-204	ENST00000535147	PLIN1	O60240	522 aa		13.67	□□□□□ -0.22
DDB1-204	ENST00000535147	ABCA8	O94911	1581 aa		13.67	□□□□□ -0.22
DDB1-204	ENST00000535147	NUP160	Q12769	1436 aa		13.66	□□□□□ -0.22
DDB1-204	ENST00000535147	PRAG1	Q86YV5	1406 aa		13.66	□□□□□ -0.22
DDB1-204	ENST00000535147		E9PCH4	1651 aa		13.66	□□□□□ -0.22
DDB1-204	ENST00000535147	CCDC144A	A2RUR9	1427 aa		13.66	□□□□□ -0.22
DDB1-204	ENST00000535147	FAM135A	Q9P2D6	1515 aa		13.66	□□□□□ -0.22
DDB1-204	ENST00000535147	ERCC6	Q03468	1493 aa		13.65	□□□□□ -0.22
DDB1-204	ENST00000535147	SKAP1	Q86WV1	359 aa		13.65	□□□□□ -0.22
DDB1-204	ENST00000535147	DISP3	Q9P2K9	1392 aa		13.64	□□□□□ -0.23
DDB1-204	ENST00000535147	PANK3	Q9H999	370 aa		13.63	□□□□□ -0.23
DDB1-204	ENST00000535147	PDE4A	P27815	886 aa		13.63	□□□□□ -0.23
DDB1-204	ENST00000535147	PDE3B	Q13370	1112 aa		13.63	□□□□□ -0.23
DDB1-204	ENST00000535147	TESK2	Q96S53	571 aa		13.63	□□□□□ -0.23
DDB1-204	ENST00000535147	PLA2R1	Q13018	1463 aa		13.62	□□□□□ -0.23
DDB1-204	ENST00000535147	CCDC141	Q6ZP82	1450 aa		13.62	□□□□□ -0.23
DDB1-204	ENST00000535147	TRPM1	Q7Z4N2	1603 aa		13.62	□□□□□ -0.23
DDB1-204	ENST00000535147	TCERG1	O14776	1098 aa	Known RBP	13.62	□□□□□ -0.23
DDB1-204	ENST00000535147	SAMD9L	Q8IVG5	1584 aa		13.61	□□□□□ -0.23
DDB1-204	ENST00000535147	RTL5	Q5HYW3	569 aa	Predicted RBP	13.61	□□□□□ -0.23
DDB1-204	ENST00000535147	A2M	P01023	1474 aa		13.61	□□□□□ -0.23
DDB1-204	ENST00000535147	ARHGEF5	Q12774	1597 aa		13.61	□□□□□ -0.23
DDB1-204	ENST00000535147	BACH2	Q9BYV9	841 aa		13.6	□□□□□ -0.23
DDB1-204	ENST00000535147	CRBN	Q96SW2	442 aa		13.59	□□□□□ -0.23
DDB1-204	ENST00000535147	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.59	□□□□□ -0.23
DDB1-204	ENST00000535147	GPRASP1	Q5JY77	1395 aa		13.59	□□□□□ -0.23
DDB1-204	ENST00000535147	LAS1L	Q9Y4W2	734 aa	Known RBP	13.59	□□□□□ -0.23
DDB1-204	ENST00000535147	CDC42BPB	Q9Y5S2	1711 aa		13.57	□□□□□ -0.24
DDB1-204	ENST00000535147	ARX	Q96QS3	562 aa		13.57	□□□□□ -0.24
DDB1-204	ENST00000535147	SYCP2	Q9BX26	1530 aa		13.57	□□□□□ -0.24
DDB1-204	ENST00000535147	C20orf194	Q5TEA3	1177 aa		13.57	□□□□□ -0.24
DDB1-204	ENST00000535147	ERBIN	Q96RT1	1412 aa		13.57	□□□□□ -0.24
DDB1-204	ENST00000535147	ADAMTS8	Q9UP79	889 aa		13.56	□□□□□ -0.24
DDB1-204	ENST00000535147	TMF1	P82094	1093 aa		13.56	□□□□□ -0.24
DDB1-204	ENST00000535147	PLEKHH2	Q8IVE3	1493 aa		13.56	□□□□□ -0.24
DDB1-204	ENST00000535147	RSPH4A	Q5TD94	716 aa		13.55	□□□□□ -0.24
DDB1-204	ENST00000535147	WASHC2C	Q9Y4E1	1318 aa		13.55	□□□□□ -0.24
DDB1-204	ENST00000535147	BLM	P54132	1417 aa	Predicted RBP	13.55	□□□□□ -0.24
DDB1-204	ENST00000535147	MS4A1	P11836	297 aa		13.54	□□□□□ -0.24
DDB1-204	ENST00000535147	PRDM15	P57071	1507 aa	Predicted RBP	13.54	□□□□□ -0.24
DDB1-204	ENST00000535147	PREX2	Q70Z35	1606 aa		13.54	□□□□□ -0.24
DDB1-204	ENST00000535147	ARHGAP5	Q13017	1502 aa		13.53	□□□□□ -0.24
DDB1-204	ENST00000535147	NEFM	P07197	916 aa		13.51	□□□□□ -0.25
DDB1-204	ENST00000535147	UNC13B	O14795	1591 aa		13.51	□□□□□ -0.25
DDB1-204	ENST00000535147	TTC37	Q6PGP7	1564 aa		13.51	□□□□□ -0.25
DDB1-204	ENST00000535147	PLEKHH1	Q9ULM0	1364 aa		13.5	□□□□□ -0.25
DDB1-204	ENST00000535147	MYO5C	Q9NQX4	1742 aa		13.5	□□□□□ -0.25
DDB1-204	ENST00000535147	MAGI2	Q86UL8	1455 aa		13.5	□□□□□ -0.25
DDB1-204	ENST00000535147	PPP2R1A	P30153	589 aa		13.49	□□□□□ -0.25
DDB1-204	ENST00000535147	KNSTRN	Q9Y448	316 aa		13.49	□□□□□ -0.25
DDB1-204	ENST00000535147	ZMYM4	Q5VZL5	1548 aa		13.49	□□□□□ -0.25
DDB1-204	ENST00000535147	WDR43	Q15061	677 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
DDB1-204	ENST00000535147	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
DDB1-204	ENST00000535147	DUSP27	Q5VZP5	1158 aa		13.48	□□□□□ -0.25
DDB1-204	ENST00000535147	LAMC1	P11047	1609 aa		13.48	□□□□□ -0.25
DDB1-204	ENST00000535147	WDR7	Q9Y4E6	1490 aa		13.47	□□□□□ -0.25
DDB1-204	ENST00000535147	INSR	P06213	1382 aa		13.47	□□□□□ -0.25
DDB1-204	ENST00000535147	SLC4A3	P48751	1232 aa		13.47	□□□□□ -0.25
DDB1-204	ENST00000535147	IQGAP3	Q86VI3	1631 aa		13.46	□□□□□ -0.25
DDB1-204	ENST00000535147	TULP1	O00294	542 aa	Predicted RBP	13.46	□□□□□ -0.26
DDB1-204	ENST00000535147	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.46	□□□□□ -0.26
DDB1-204	ENST00000535147	MAST1	Q9Y2H9	1570 aa		13.45	□□□□□ -0.26
DDB1-204	ENST00000535147	CCDC146	Q8IYE0	955 aa		13.45	□□□□□ -0.26
DDB1-204	ENST00000535147	KDM2B	Q8NHM5	1336 aa		13.45	□□□□□ -0.26
DDB1-204	ENST00000535147	GOLGA2	Q08379	1002 aa		13.44	□□□□□ -0.26
DDB1-204	ENST00000535147	ATP10A	O60312	1499 aa		13.44	□□□□□ -0.26
DDB1-204	ENST00000535147	IL27	Q8NEV9	243 aa		13.43	□□□□□ -0.26
DDB1-204	ENST00000535147	DUOX2	Q9NRD8	1548 aa		13.43	□□□□□ -0.26

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