RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 C9orf84Q5VXU9 1444 aa21.1■□□□□ 0.97
TPBG-202ENST00000535040 ANKRD30AQ9BXX3 1397 aa21.09■□□□□ 0.97
TPBG-202ENST00000535040 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
TPBG-202ENST00000535040 CROCC2H7BZ55 1655 aa21.07■□□□□ 0.96
TPBG-202ENST00000535040 CCDC141Q6ZP82 1450 aa21.07■□□□□ 0.96
TPBG-202ENST00000535040 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
TPBG-202ENST00000535040 ARID4BQ4LE39 1312 aaPredicted RBP21.06■□□□□ 0.96
TPBG-202ENST00000535040 ADGRL2O95490 1459 aa21.05■□□□□ 0.96
TPBG-202ENST00000535040 FANCAO15360 1455 aa21.03■□□□□ 0.96
TPBG-202ENST00000535040 ARHGEF12Q9NZN5 1544 aa21.02■□□□□ 0.96
TPBG-202ENST00000535040 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
TPBG-202ENST00000535040 ABCA9Q8IUA7 1624 aa21.02■□□□□ 0.96
TPBG-202ENST00000535040 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.96
TPBG-202ENST00000535040 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.95
TPBG-202ENST00000535040 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
TPBG-202ENST00000535040 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
TPBG-202ENST00000535040 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
TPBG-202ENST00000535040 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
TPBG-202ENST00000535040 KIF15Q9NS87 1388 aa21.01■□□□□ 0.95
TPBG-202ENST00000535040 UHRF1BP1Q6BDS2 1440 aa21.01■□□□□ 0.95
TPBG-202ENST00000535040 CCDC136Q96JN2 1154 aa21■□□□□ 0.95
TPBG-202ENST00000535040 SHANK2Q9UPX8 1470 aa21■□□□□ 0.95
TPBG-202ENST00000535040 CD109Q6YHK3 1445 aa21■□□□□ 0.95
TPBG-202ENST00000535040 POLR3GLQ9BT43 218 aa21■□□□□ 0.95
TPBG-202ENST00000535040 RALGAPBQ86X10 1494 aa20.99■□□□□ 0.95
TPBG-202ENST00000535040 DEKP35659 375 aaKnown RBP20.99■□□□□ 0.95
TPBG-202ENST00000535040 ZNF326Q5BKZ1 582 aaKnown RBP20.99■□□□□ 0.95
TPBG-202ENST00000535040 ANKRD50Q9ULJ7 1429 aa20.99■□□□□ 0.95
TPBG-202ENST00000535040 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
TPBG-202ENST00000535040 PKD2Q13563 968 aa20.98■□□□□ 0.95
TPBG-202ENST00000535040 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
TPBG-202ENST00000535040 ABCC1P33527 1531 aa20.97■□□□□ 0.95
TPBG-202ENST00000535040 LRPPRCP42704 1394 aaKnown RBP20.96■□□□□ 0.95
TPBG-202ENST00000535040 ADGRL1O94910 1474 aa20.95■□□□□ 0.94
TPBG-202ENST00000535040 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
TPBG-202ENST00000535040 SPAG9O60271 1321 aaKnown RBP20.94■□□□□ 0.94
TPBG-202ENST00000535040 E9PCH4 1651 aa20.94■□□□□ 0.94
TPBG-202ENST00000535040 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
TPBG-202ENST00000535040 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
TPBG-202ENST00000535040 TMC1Q8TDI8 760 aa20.93■□□□□ 0.94
TPBG-202ENST00000535040 ARAP3Q8WWN8 1544 aa20.92■□□□□ 0.94
TPBG-202ENST00000535040 IPO9Q96P70 1041 aaKnown RBP20.92■□□□□ 0.94
TPBG-202ENST00000535040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.91■□□□□ 0.94
TPBG-202ENST00000535040 BRD4O60885 1362 aaPredicted RBP20.9■□□□□ 0.94
TPBG-202ENST00000535040 ANP32AP39687 249 aaKnown RBP20.89■□□□□ 0.94
TPBG-202ENST00000535040 NBR1Q14596 966 aa20.89■□□□□ 0.94
TPBG-202ENST00000535040 NUP155O75694 1391 aa20.89■□□□□ 0.93
TPBG-202ENST00000535040 CARD11Q9BXL7 1154 aa20.88■□□□□ 0.93
TPBG-202ENST00000535040 KTN1Q86UP2 1357 aaKnown RBP20.87■□□□□ 0.93
TPBG-202ENST00000535040 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
TPBG-202ENST00000535040 MYBBP1AQ9BQG0 1328 aaKnown RBP20.87■□□□□ 0.93
TPBG-202ENST00000535040 ST20-MTHFSA0A0A6YYL1 179 aa20.84■□□□□ 0.93
TPBG-202ENST00000535040 MAST1Q9Y2H9 1570 aa20.84■□□□□ 0.93
TPBG-202ENST00000535040 RALBP1Q15311 655 aa20.84■□□□□ 0.93
TPBG-202ENST00000535040 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.93
TPBG-202ENST00000535040 RAPGEF3O95398 923 aa20.82■□□□□ 0.92
TPBG-202ENST00000535040 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
TPBG-202ENST00000535040 PLXNC1O60486 1568 aa20.79■□□□□ 0.92
TPBG-202ENST00000535040 EXOC6Q8TAG9 804 aa20.79■□□□□ 0.92
TPBG-202ENST00000535040 ZFYVE16Q7Z3T8 1539 aa20.79■□□□□ 0.92
TPBG-202ENST00000535040 TSPOAP1O95153 1857 aa20.78■□□□□ 0.92
TPBG-202ENST00000535040 KDM2AQ9Y2K7 1162 aa20.78■□□□□ 0.92
TPBG-202ENST00000535040 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
TPBG-202ENST00000535040 DUOX2Q9NRD8 1548 aa20.77■□□□□ 0.92
TPBG-202ENST00000535040 CFAP74Q9C0B2 1584 aa20.77■□□□□ 0.92
TPBG-202ENST00000535040 DIP2BQ9P265 1576 aa20.77■□□□□ 0.92
TPBG-202ENST00000535040 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
TPBG-202ENST00000535040 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
TPBG-202ENST00000535040 ZNF518AQ6AHZ1 1483 aa20.76■□□□□ 0.91
TPBG-202ENST00000535040 TRPM1Q7Z4N2 1603 aa20.76■□□□□ 0.91
TPBG-202ENST00000535040 DCAF11Q8TEB1 546 aa20.76■□□□□ 0.91
TPBG-202ENST00000535040 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
TPBG-202ENST00000535040 RTEL1-TNFRSF6BF6WH68 1400 aa20.74■□□□□ 0.91
TPBG-202ENST00000535040 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
TPBG-202ENST00000535040 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
TPBG-202ENST00000535040 KIF3BO15066 747 aa20.73■□□□□ 0.91
TPBG-202ENST00000535040 NEO1Q92859 1461 aa20.73■□□□□ 0.91
TPBG-202ENST00000535040 NLRP13Q86W25 1043 aa20.73■□□□□ 0.91
TPBG-202ENST00000535040 PDE3BQ13370 1112 aa20.72■□□□□ 0.91
TPBG-202ENST00000535040 GLI2P10070 1586 aa20.72■□□□□ 0.91
TPBG-202ENST00000535040 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
TPBG-202ENST00000535040 INO80Q9ULG1 1556 aaPredicted RBP20.71■□□□□ 0.91
TPBG-202ENST00000535040 PRAG1Q86YV5 1406 aa20.7■□□□□ 0.9
TPBG-202ENST00000535040 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
TPBG-202ENST00000535040 FAM135AQ9P2D6 1515 aa20.69■□□□□ 0.9
TPBG-202ENST00000535040 PER1O15534 1290 aaPredicted RBP20.68■□□□□ 0.9
TPBG-202ENST00000535040 PDE4AP27815 886 aa20.68■□□□□ 0.9
TPBG-202ENST00000535040 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
TPBG-202ENST00000535040 BACH2Q9BYV9 841 aa20.67■□□□□ 0.9
TPBG-202ENST00000535040 KIDINS220Q9ULH0 1771 aa20.66■□□□□ 0.9
TPBG-202ENST00000535040 MS4A1P11836 297 aa20.66■□□□□ 0.9
TPBG-202ENST00000535040 NPM2Q86SE8 214 aaKnown RBP20.65■□□□□ 0.9
TPBG-202ENST00000535040 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
TPBG-202ENST00000535040 LAMC1P11047 1609 aa20.65■□□□□ 0.9
TPBG-202ENST00000535040 BLMP54132 1417 aaPredicted RBP20.65■□□□□ 0.9
TPBG-202ENST00000535040 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.9
TPBG-202ENST00000535040 PRKCSHP14314 528 aaPredicted RBP20.64■□□□□ 0.89
TPBG-202ENST00000535040 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
TPBG-202ENST00000535040 INSRP06213 1382 aa20.64■□□□□ 0.89
TPBG-202ENST00000535040 UNC13BO14795 1591 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms