RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 PREX1Q8TCU6 1659 aa8.02□□□□□ -1.13
NPIPB3-206ENST00000534903 CAPN15O75808 1086 aa8.02□□□□□ -1.13
NPIPB3-206ENST00000534903 CEBPAP49715 358 aaPredicted RBP8.02□□□□□ -1.13
NPIPB3-206ENST00000534903 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
NPIPB3-206ENST00000534903 STRCQ7RTU9 1775 aa8.02□□□□□ -1.13
NPIPB3-206ENST00000534903 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
NPIPB3-206ENST00000534903 CCDC141Q6ZP82 1450 aa8.01□□□□□ -1.13
NPIPB3-206ENST00000534903 RICTORQ6R327 1708 aa8□□□□□ -1.13
NPIPB3-206ENST00000534903 ATP10AO60312 1499 aa8□□□□□ -1.13
NPIPB3-206ENST00000534903 UBAP1LF5GYI3 381 aa8□□□□□ -1.13
NPIPB3-206ENST00000534903 C9orf84Q5VXU9 1444 aa8□□□□□ -1.13
NPIPB3-206ENST00000534903 KIAA1107Q9UPP5 1409 aa8□□□□□ -1.13
NPIPB3-206ENST00000534903 MBD5Q9P267 1494 aa8□□□□□ -1.13
NPIPB3-206ENST00000534903 ANKRD30AQ9BXX3 1397 aa7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 ABCC1P33527 1531 aa7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 SYCP2Q9BX26 1530 aa7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 PLXNC1O60486 1568 aa7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 PLCH2O75038 1416 aa7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 NCOA1Q15788 1441 aa7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 SETD1BQ9UPS6 1966 aaKnown RBP7.99□□□□□ -1.13
NPIPB3-206ENST00000534903 CFAP74Q9C0B2 1584 aa7.98□□□□□ -1.13
NPIPB3-206ENST00000534903 TRAPPC8Q9Y2L5 1435 aa7.98□□□□□ -1.13
NPIPB3-206ENST00000534903 FER1L4A9Z1Z3 1794 aa7.98□□□□□ -1.13
NPIPB3-206ENST00000534903 SCAPERQ9BY12 1400 aa7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 NCBP3Q53F19 620 aaKnown RBP7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 RSPH4AQ5TD94 716 aa7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 CHIC2Q9UKJ5 165 aa7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 SIGLEC1Q9BZZ2 1709 aa7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 KDM5DQ9BY66 1539 aa7.97□□□□□ -1.13
NPIPB3-206ENST00000534903 KCNA4P22459 653 aa7.96□□□□□ -1.14
NPIPB3-206ENST00000534903 ZNF777Q9ULD5 760 aaPredicted RBP7.96□□□□□ -1.14
NPIPB3-206ENST00000534903 TIMELESSQ9UNS1 1208 aa7.95□□□□□ -1.14
NPIPB3-206ENST00000534903 ANKRD50Q9ULJ7 1429 aa7.95□□□□□ -1.14
NPIPB3-206ENST00000534903 NPM3O75607 178 aaKnown RBP7.94□□□□□ -1.14
NPIPB3-206ENST00000534903 PKD2Q13563 968 aa7.94□□□□□ -1.14
NPIPB3-206ENST00000534903 ESF1Q9H501 851 aaKnown RBP7.94□□□□□ -1.14
NPIPB3-206ENST00000534903 ZNF335Q9H4Z2 1342 aaPredicted RBP7.94□□□□□ -1.14
NPIPB3-206ENST00000534903 KIF15Q9NS87 1388 aa7.94□□□□□ -1.14
NPIPB3-206ENST00000534903 UNC13BO14795 1591 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 TOM1O60784 492 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 TSPY4P0CV99 314 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 TSPY10P0CW01 314 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 HSPA1LP34931 641 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 EFCAB2Q5VUJ9 269 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 CNTLNQ9NXG0 1405 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 PZPP20742 1482 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 DUOX2Q9NRD8 1548 aa7.93□□□□□ -1.14
NPIPB3-206ENST00000534903 NPATQ14207 1427 aa7.92□□□□□ -1.14
NPIPB3-206ENST00000534903 ERBINQ96RT1 1412 aa7.92□□□□□ -1.14
NPIPB3-206ENST00000534903 INO80Q9ULG1 1556 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-206ENST00000534903 RTEL1-TNFRSF6BF6WH68 1400 aa7.91□□□□□ -1.14
NPIPB3-206ENST00000534903 ZNF518AQ6AHZ1 1483 aa7.91□□□□□ -1.14
NPIPB3-206ENST00000534903 AGLP35573 1532 aa7.91□□□□□ -1.14
NPIPB3-206ENST00000534903 REREQ9P2R6 1566 aa7.9□□□□□ -1.14
NPIPB3-206ENST00000534903 PLA2R1Q13018 1463 aa7.9□□□□□ -1.14
NPIPB3-206ENST00000534903 TONSLQ96HA7 1378 aa7.9□□□□□ -1.14
NPIPB3-206ENST00000534903 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
NPIPB3-206ENST00000534903 HNRNPMP52272 730 aaKnown RBP eCLIP7.9□□□□□ -1.14
NPIPB3-206ENST00000534903 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
NPIPB3-206ENST00000534903 ATP7AQ04656 1500 aa7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 NCKAP5LQ9HCH0 1330 aa7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 AFAP1Q8N556 730 aa7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 MPHOSPH9Q99550 1183 aa7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 CAMSAP1Q5T5Y3 1602 aa7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 IQGAP3Q86VI3 1631 aa7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 EIF2AK4Q9P2K8 1649 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-206ENST00000534903 RPRD2Q5VT52 1461 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-206ENST00000534903 ANKRD30BQ9BXX2 1392 aa7.88□□□□□ -1.15
NPIPB3-206ENST00000534903 KDM5CP41229 1560 aa7.88□□□□□ -1.15
NPIPB3-206ENST00000534903 FAM135AQ9P2D6 1515 aa7.88□□□□□ -1.15
NPIPB3-206ENST00000534903 MLH3Q9UHC1 1453 aa7.87□□□□□ -1.15
NPIPB3-206ENST00000534903 PIP4K2BP78356 416 aa7.87□□□□□ -1.15
NPIPB3-206ENST00000534903 DEPDC5O75140 1603 aa7.87□□□□□ -1.15
NPIPB3-206ENST00000534903 ZMYM3Q14202 1370 aa7.86□□□□□ -1.15
NPIPB3-206ENST00000534903 C3P01024 1663 aa7.86□□□□□ -1.15
NPIPB3-206ENST00000534903 SIN3AQ96ST3 1273 aa7.86□□□□□ -1.15
NPIPB3-206ENST00000534903 SLC4A1APQ9BWU0 796 aaKnown RBP7.86□□□□□ -1.15
NPIPB3-206ENST00000534903 MYT1LQ9UL68 1186 aa7.86□□□□□ -1.15
NPIPB3-206ENST00000534903 NUP155O75694 1391 aa7.85□□□□□ -1.15
NPIPB3-206ENST00000534903 SPAG9O60271 1321 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-206ENST00000534903 CPS1P31327 1500 aa7.85□□□□□ -1.15
NPIPB3-206ENST00000534903 NEUROD1Q13562 356 aa7.85□□□□□ -1.15
NPIPB3-206ENST00000534903 DIP2CQ9Y2E4 1556 aa7.84□□□□□ -1.15
NPIPB3-206ENST00000534903 KIDINS220Q9ULH0 1771 aa7.84□□□□□ -1.15
NPIPB3-206ENST00000534903 PRDM15P57071 1507 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-206ENST00000534903 ABCB7O75027 752 aa7.83□□□□□ -1.16
NPIPB3-206ENST00000534903 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-206ENST00000534903 RNF17Q9BXT8 1623 aaKnown RBP7.82□□□□□ -1.16
NPIPB3-206ENST00000534903 VWDEQ8N2E2 1590 aa7.82□□□□□ -1.16
NPIPB3-206ENST00000534903 RGS17Q9UGC6 210 aaPredicted RBP7.82□□□□□ -1.16
NPIPB3-206ENST00000534903 TET3O43151 1660 aa7.82□□□□□ -1.16
NPIPB3-206ENST00000534903 DIEXFQ68CQ4 756 aaKnown RBP7.81□□□□□ -1.16
NPIPB3-206ENST00000534903 MROH1Q8NDA8 1641 aa7.81□□□□□ -1.16
NPIPB3-206ENST00000534903 ABCA6Q8N139 1617 aa7.8□□□□□ -1.16
NPIPB3-206ENST00000534903 DHX29Q7Z478 1369 aaKnown RBP7.8□□□□□ -1.16
NPIPB3-206ENST00000534903 MROH2AA6NES4 1674 aa7.79□□□□□ -1.16
NPIPB3-206ENST00000534903 A2MP01023 1474 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms