RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PTPREP23469 700 aa4.31□□□□□ -1.72
COPB1-212ENST00000534771 TJAP1Q5JTD0 557 aa4.31□□□□□ -1.72
COPB1-212ENST00000534771 SOX12O15370 315 aa4.3□□□□□ -1.72
COPB1-212ENST00000534771 BCL2L12Q9HB09 334 aa4.3□□□□□ -1.72
COPB1-212ENST00000534771 PHF8Q9UPP1 1060 aa4.3□□□□□ -1.72
COPB1-212ENST00000534771 GPAT2Q6NUI2 795 aa4.29□□□□□ -1.72
COPB1-212ENST00000534771 TNFRSF10AO00220 468 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 PRR20EP86478 221 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 PRR20CP86479 221 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 PRR20DP86480 221 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 PRR20BP86481 221 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 PRR20AP86496 221 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 RASSF7Q02833 373 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 ZNF454Q8N9F8 522 aa4.28□□□□□ -1.72
COPB1-212ENST00000534771 PTCD2Q8WV60 388 aaKnown RBP4.28□□□□□ -1.72
COPB1-212ENST00000534771 ZFRQ96KR1 1074 aaKnown RBP4.28□□□□□ -1.72
COPB1-212ENST00000534771 SLC19A1P41440 591 aa4.27□□□□□ -1.73
COPB1-212ENST00000534771 SLC16A10Q8TF71 515 aa4.27□□□□□ -1.73
COPB1-212ENST00000534771 TSR3Q9UJK0 312 aaKnown RBP4.27□□□□□ -1.73
COPB1-212ENST00000534771 HPS5Q9UPZ3 1129 aa4.27□□□□□ -1.73
COPB1-212ENST00000534771 SNRPBP14678 240 aaKnown RBP4.26□□□□□ -1.73
COPB1-212ENST00000534771 TMC2Q8TDI7 906 aa4.25□□□□□ -1.73
COPB1-212ENST00000534771 ZNF516Q92618 1163 aa4.25□□□□□ -1.73
COPB1-212ENST00000534771 IL21Q9HBE4 155 aa4.25□□□□□ -1.73
COPB1-212ENST00000534771 RABGEF1Q9UJ41 708 aa4.25□□□□□ -1.73
COPB1-212ENST00000534771 GGCXP38435 758 aa4.24□□□□□ -1.73
COPB1-212ENST00000534771 ZNF598Q86UK7 904 aaKnown RBP4.24□□□□□ -1.73
COPB1-212ENST00000534771 NKX2-3Q8TAU0 364 aa4.24□□□□□ -1.73
COPB1-212ENST00000534771 AXIN1O15169 862 aa4.23□□□□□ -1.73
COPB1-212ENST00000534771 LAPTM4BQ86VI4 370 aa4.23□□□□□ -1.73
COPB1-212ENST00000534771 CRIPAKQ8N1N5 446 aa4.23□□□□□ -1.73
COPB1-212ENST00000534771 Q8N3U1 123 aa4.23□□□□□ -1.73
COPB1-212ENST00000534771 CSRNP3Q8WYN3 585 aa4.23□□□□□ -1.73
COPB1-212ENST00000534771 MTRQ99707 1265 aa4.23□□□□□ -1.73
COPB1-212ENST00000534771 TBC1D12O60347 775 aa4.22□□□□□ -1.73
COPB1-212ENST00000534771 ADAM23O75077 832 aa4.22□□□□□ -1.73
COPB1-212ENST00000534771 SPRYD7Q5W111 196 aa4.22□□□□□ -1.73
COPB1-212ENST00000534771 KRTAP17-1Q9BYP8 105 aa4.22□□□□□ -1.73
COPB1-212ENST00000534771 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.22□□□□□ -1.73
COPB1-212ENST00000534771 GDF9O60383 454 aa4.21□□□□□ -1.74
COPB1-212ENST00000534771 IGHA1P01876 353 aa4.21□□□□□ -1.74
COPB1-212ENST00000534771 PROX2Q3B8N5 592 aa4.21□□□□□ -1.74
COPB1-212ENST00000534771 EMID1Q96A84 441 aaPredicted RBP4.21□□□□□ -1.74
COPB1-212ENST00000534771 ZNF697Q5TEC3 545 aa4.2□□□□□ -1.74
COPB1-212ENST00000534771 PPP4CP60510 307 aa4.19□□□□□ -1.74
COPB1-212ENST00000534771 IRF7Q92985 503 aa4.19□□□□□ -1.74
COPB1-212ENST00000534771 LRCH3Q96II8 777 aa4.19□□□□□ -1.74
COPB1-212ENST00000534771 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
COPB1-212ENST00000534771 TMUB1Q9BVT8 246 aa4.18□□□□□ -1.74
COPB1-212ENST00000534771 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
COPB1-212ENST00000534771 KIAA1468Q9P260 1216 aa4.17□□□□□ -1.74
COPB1-212ENST00000534771 SEPT9Q9UHD8 586 aaPredicted RBP4.17□□□□□ -1.74
COPB1-212ENST00000534771 KLHL34Q8N239 644 aa4.16□□□□□ -1.74
COPB1-212ENST00000534771 ADAM33Q9BZ11 813 aa4.16□□□□□ -1.74
COPB1-212ENST00000534771 AVPP01185 164 aa4.15□□□□□ -1.75
COPB1-212ENST00000534771 FOSBP53539 338 aa4.15□□□□□ -1.75
COPB1-212ENST00000534771 NLRP6P59044 892 aa4.15□□□□□ -1.75
COPB1-212ENST00000534771 NXF1Q9UBU9 619 aaKnown RBP4.15□□□□□ -1.75
COPB1-212ENST00000534771 VEGFBP49765 207 aa4.14□□□□□ -1.75
COPB1-212ENST00000534771 CTC1Q2NKJ3 1217 aa4.13□□□□□ -1.75
COPB1-212ENST00000534771 LIAT1Q6ZQX7 453 aa4.13□□□□□ -1.75
COPB1-212ENST00000534771 TRIM47Q96LD4 638 aa4.13□□□□□ -1.75
COPB1-212ENST00000534771 ATP13A2Q9NQ11 1180 aa4.13□□□□□ -1.75
COPB1-212ENST00000534771 RNF223E7ERA6 249 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 FOXC1Q12948 553 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 PLPP6Q8IY26 295 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 SENP2Q9HC62 589 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 ERBB4Q15303 1308 aa4.12□□□□□ -1.75
COPB1-212ENST00000534771 SMCPP49901 116 aaPredicted RBP4.11□□□□□ -1.75
COPB1-212ENST00000534771 ZDHHC16Q969W1 377 aa4.11□□□□□ -1.75
COPB1-212ENST00000534771 DNMT3AQ9Y6K1 912 aaPredicted RBP4.11□□□□□ -1.75
COPB1-212ENST00000534771 PPP1R3GB7ZBB8 358 aa4.1□□□□□ -1.75
COPB1-212ENST00000534771 RNF225M0QZC1 329 aaPredicted RBP4.1□□□□□ -1.75
COPB1-212ENST00000534771 COL9A1P20849 921 aa4.1□□□□□ -1.75
COPB1-212ENST00000534771 FAM98CQ17RN3 349 aaKnown RBP4.1□□□□□ -1.75
COPB1-212ENST00000534771 FBXO22Q8NEZ5 403 aa4.1□□□□□ -1.75
COPB1-212ENST00000534771 FOXK2Q01167 660 aa4.09□□□□□ -1.75
COPB1-212ENST00000534771 CIZ1Q9ULV3 898 aaPredicted RBP4.09□□□□□ -1.75
COPB1-212ENST00000534771 PPEF1O14829 653 aaPredicted RBP4.07□□□□□ -1.76
COPB1-212ENST00000534771 IRS1P35568 1242 aa4.07□□□□□ -1.76
COPB1-212ENST00000534771 PKD2L1Q9P0L9 805 aa4.07□□□□□ -1.76
COPB1-212ENST00000534771 ADAMTS8Q9UP79 889 aa4.07□□□□□ -1.76
COPB1-212ENST00000534771 H3BM21 787 aa4.06□□□□□ -1.76
COPB1-212ENST00000534771 COPS2P61201 443 aa4.06□□□□□ -1.76
COPB1-212ENST00000534771 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
COPB1-212ENST00000534771 NPAS3Q8IXF0 933 aa4.06□□□□□ -1.76
COPB1-212ENST00000534771 KIFC2Q96AC6 838 aa4.06□□□□□ -1.76
COPB1-212ENST00000534771 UPF1Q92900 1129 aaKnown RBP eCLIP4.05□□□□□ -1.76
COPB1-212ENST00000534771 GOLGA2P5Q9HBQ8 144 aa4.05□□□□□ -1.76
COPB1-212ENST00000534771 MSTNO14793 375 aa4.04□□□□□ -1.76
COPB1-212ENST00000534771 FOXK1P85037 733 aa4.04□□□□□ -1.76
COPB1-212ENST00000534771 CYP4X1Q8N118 509 aa4.04□□□□□ -1.76
COPB1-212ENST00000534771 JPH4Q96JJ6 628 aa4.04□□□□□ -1.76
COPB1-212ENST00000534771 TOR4AQ9NXH8 423 aa4.04□□□□□ -1.76
COPB1-212ENST00000534771 ANKLE1Q8NAG6 615 aa4.03□□□□□ -1.76
COPB1-212ENST00000534771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.02□□□□□ -1.77
COPB1-212ENST00000534771 K7ELQ4 463 aaPredicted RBP4.02□□□□□ -1.77
COPB1-212ENST00000534771 ONECUT3O60422 494 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms