RNA–Protein interactions for RNA: ENST00000534751.2

PRDM11-205, Transcript of PR/SET domain 11, humanhuman

TSL 5

Gene PRDM11, Length 3,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-205ENST00000534751 OFD1O75665 1012 aa17.1■□□□□ 0.33
PRDM11-205ENST00000534751 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
PRDM11-205ENST00000534751 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
PRDM11-205ENST00000534751 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
PRDM11-205ENST00000534751 ANTXR1Q9H6X2 564 aa17.09■□□□□ 0.33
PRDM11-205ENST00000534751 UQCRHLA0A096LP55 91 aa17.09■□□□□ 0.33
PRDM11-205ENST00000534751 UQCRHP07919 91 aa17.09■□□□□ 0.33
PRDM11-205ENST00000534751 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
PRDM11-205ENST00000534751 MTERF4Q7Z6M4 381 aaKnown RBP17.07■□□□□ 0.32
PRDM11-205ENST00000534751 ZSCAN30Q86W11 494 aa17.07■□□□□ 0.32
PRDM11-205ENST00000534751 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
PRDM11-205ENST00000534751 SEC24BO95487 1268 aa17.06■□□□□ 0.32
PRDM11-205ENST00000534751 DMTNQ08495 405 aa17.06■□□□□ 0.32
PRDM11-205ENST00000534751 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
PRDM11-205ENST00000534751 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
PRDM11-205ENST00000534751 IPO4Q8TEX9 1081 aaKnown RBP17.06■□□□□ 0.32
PRDM11-205ENST00000534751 VGLL3A8MV65 326 aa17.05■□□□□ 0.32
PRDM11-205ENST00000534751 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
PRDM11-205ENST00000534751 FOXD1Q16676 465 aa17.05■□□□□ 0.32
PRDM11-205ENST00000534751 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
PRDM11-205ENST00000534751 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
PRDM11-205ENST00000534751 USP19O94966 1318 aa17.04■□□□□ 0.32
PRDM11-205ENST00000534751 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
PRDM11-205ENST00000534751 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
PRDM11-205ENST00000534751 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
PRDM11-205ENST00000534751 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
PRDM11-205ENST00000534751 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
PRDM11-205ENST00000534751 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.32
PRDM11-205ENST00000534751 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.31
PRDM11-205ENST00000534751 TERF1P54274 439 aa17.01■□□□□ 0.31
PRDM11-205ENST00000534751 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
PRDM11-205ENST00000534751 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
PRDM11-205ENST00000534751 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
PRDM11-205ENST00000534751 FBLN2P98095 1184 aa17.01■□□□□ 0.31
PRDM11-205ENST00000534751 CCDC173Q0VFZ6 552 aa17.01■□□□□ 0.31
PRDM11-205ENST00000534751 MYBBP1AQ9BQG0 1328 aaKnown RBP17■□□□□ 0.31
PRDM11-205ENST00000534751 CHIC2Q9UKJ5 165 aa17■□□□□ 0.31
PRDM11-205ENST00000534751 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
PRDM11-205ENST00000534751 GAS2L3Q86XJ1 694 aa16.99■□□□□ 0.31
PRDM11-205ENST00000534751 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
PRDM11-205ENST00000534751 BRD4O60885 1362 aaPredicted RBP16.99■□□□□ 0.31
PRDM11-205ENST00000534751 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
PRDM11-205ENST00000534751 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
PRDM11-205ENST00000534751 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
PRDM11-205ENST00000534751 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
PRDM11-205ENST00000534751 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.31
PRDM11-205ENST00000534751 ZSCAN20P17040 1043 aaPredicted RBP16.96■□□□□ 0.31
PRDM11-205ENST00000534751 DYNC1I1O14576 645 aa16.96■□□□□ 0.31
PRDM11-205ENST00000534751 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
PRDM11-205ENST00000534751 NAIPQ13075 1403 aa16.95■□□□□ 0.3
PRDM11-205ENST00000534751 TMEM51Q9NW97 253 aa16.95■□□□□ 0.3
PRDM11-205ENST00000534751 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
PRDM11-205ENST00000534751 CBX1P83916 185 aa16.94■□□□□ 0.3
PRDM11-205ENST00000534751 RALBP1Q15311 655 aa16.94■□□□□ 0.3
PRDM11-205ENST00000534751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRDM11-205ENST00000534751 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
PRDM11-205ENST00000534751 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
PRDM11-205ENST00000534751 KIF20AO95235 890 aa16.93■□□□□ 0.3
PRDM11-205ENST00000534751 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
PRDM11-205ENST00000534751 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
PRDM11-205ENST00000534751 CUL7Q14999 1698 aa16.92■□□□□ 0.3
PRDM11-205ENST00000534751 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
PRDM11-205ENST00000534751 ZNF830Q96NB3 372 aaPredicted RBP16.92■□□□□ 0.3
PRDM11-205ENST00000534751 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
PRDM11-205ENST00000534751 GTPBP4Q9BZE4 634 aaKnown RBP16.91■□□□□ 0.3
PRDM11-205ENST00000534751 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
PRDM11-205ENST00000534751 SPATA31E1Q6ZUB1 1445 aa16.91■□□□□ 0.3
PRDM11-205ENST00000534751 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
PRDM11-205ENST00000534751 WDR62O43379 1518 aa16.9■□□□□ 0.3
PRDM11-205ENST00000534751 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
PRDM11-205ENST00000534751 LETM1O95202 739 aaPredicted RBP16.9■□□□□ 0.3
PRDM11-205ENST00000534751 TBC1D32Q96NH3 1257 aa16.9■□□□□ 0.3
PRDM11-205ENST00000534751 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
PRDM11-205ENST00000534751 USP47Q96K76 1375 aa16.88■□□□□ 0.29
PRDM11-205ENST00000534751 PPP1R9BQ96SB3 815 aa16.88■□□□□ 0.29
PRDM11-205ENST00000534751 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
PRDM11-205ENST00000534751 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
PRDM11-205ENST00000534751 CGNQ9P2M7 1197 aaKnown RBP16.87■□□□□ 0.29
PRDM11-205ENST00000534751 GBP4Q96PP9 640 aa16.87■□□□□ 0.29
PRDM11-205ENST00000534751 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
PRDM11-205ENST00000534751 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
PRDM11-205ENST00000534751 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
PRDM11-205ENST00000534751 IGHDP01880 384 aa16.86■□□□□ 0.29
PRDM11-205ENST00000534751 SKOR2Q2VWA4 1001 aaPredicted RBP16.85■□□□□ 0.29
PRDM11-205ENST00000534751 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
PRDM11-205ENST00000534751 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
PRDM11-205ENST00000534751 ZBTB22O15209 634 aa16.84■□□□□ 0.29
PRDM11-205ENST00000534751 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
PRDM11-205ENST00000534751 PBRM1Q86U86 1689 aa16.83■□□□□ 0.29
PRDM11-205ENST00000534751 MIA2Q96PC5 1412 aa16.83■□□□□ 0.29
PRDM11-205ENST00000534751 IGSF3O75054 1194 aa16.83■□□□□ 0.28
PRDM11-205ENST00000534751 FTSJ3Q8IY81 847 aaKnown RBP16.83■□□□□ 0.28
PRDM11-205ENST00000534751 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
PRDM11-205ENST00000534751 MFAP1P55081 439 aaKnown RBP16.82■□□□□ 0.28
PRDM11-205ENST00000534751 RSPH4AQ5TD94 716 aa16.82■□□□□ 0.28
PRDM11-205ENST00000534751 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
PRDM11-205ENST00000534751 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
PRDM11-205ENST00000534751 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
PRDM11-205ENST00000534751 ZNF500O60304 480 aaPredicted RBP16.81■□□□□ 0.28
PRDM11-205ENST00000534751 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms