RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PTGDRQ13258 359 aa14.53□□□□□ -0.08
CASP4-213ENST00000534356 C6orf132Q5T0Z8 1188 aa14.53□□□□□ -0.08
CASP4-213ENST00000534356 NPDC1Q9NQX5 325 aaPredicted RBP14.53□□□□□ -0.08
CASP4-213ENST00000534356 ERBB3P21860 1342 aa14.5□□□□□ -0.09
CASP4-213ENST00000534356 EMP3P54852 163 aa14.5□□□□□ -0.09
CASP4-213ENST00000534356 SLC24A3Q9HC58 644 aa14.5□□□□□ -0.09
CASP4-213ENST00000534356 LCE2DQ5TA82 110 aaPredicted RBP14.49□□□□□ -0.09
CASP4-213ENST00000534356 GNPATO15228 680 aa14.48□□□□□ -0.09
CASP4-213ENST00000534356 HIC1Q14526 733 aa14.48□□□□□ -0.09
CASP4-213ENST00000534356 VARS2Q5ST30 1063 aaKnown RBP14.48□□□□□ -0.09
CASP4-213ENST00000534356 BCL2L12Q9HB09 334 aa14.48□□□□□ -0.09
CASP4-213ENST00000534356 FECHP22830 423 aa14.47□□□□□ -0.09
CASP4-213ENST00000534356 POTEGQ6S5H5 508 aa14.47□□□□□ -0.09
CASP4-213ENST00000534356 KRI1Q8N9T8 703 aaKnown RBP14.46□□□□□ -0.09
CASP4-213ENST00000534356 FAM205CA6NFA0 338 aa14.44□□□□□ -0.1
CASP4-213ENST00000534356 COL9A1P20849 921 aa14.42□□□□□ -0.1
CASP4-213ENST00000534356 PTPREP23469 700 aa14.42□□□□□ -0.1
CASP4-213ENST00000534356 CERKQ8TCT0 537 aa14.41□□□□□ -0.1
CASP4-213ENST00000534356 MAP2K5Q13163 448 aa14.4□□□□□ -0.1
CASP4-213ENST00000534356 POTEB3A0JP26 581 aa14.39□□□□□ -0.11
CASP4-213ENST00000534356 POTEBQ6S5H4 581 aa14.39□□□□□ -0.11
CASP4-213ENST00000534356 MINK1Q8N4C8 1332 aaPredicted RBP14.39□□□□□ -0.11
CASP4-213ENST00000534356 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
CASP4-213ENST00000534356 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
CASP4-213ENST00000534356 AK7Q96M32 723 aa14.37□□□□□ -0.11
CASP4-213ENST00000534356 HS3ST6Q96QI5 342 aa14.37□□□□□ -0.11
CASP4-213ENST00000534356 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
CASP4-213ENST00000534356 IRF6O14896 467 aa14.36□□□□□ -0.11
CASP4-213ENST00000534356 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
CASP4-213ENST00000534356 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
CASP4-213ENST00000534356 PSEN2P49810 448 aa14.34□□□□□ -0.11
CASP4-213ENST00000534356 PRSS12P56730 875 aa14.34□□□□□ -0.11
CASP4-213ENST00000534356 ZNF687Q8N1G0 1237 aa14.34□□□□□ -0.11
CASP4-213ENST00000534356 CCDC102AQ96A19 550 aa14.34□□□□□ -0.11
CASP4-213ENST00000534356 CDCA7LQ96GN5 454 aa14.34□□□□□ -0.11
CASP4-213ENST00000534356 AXIN2Q9Y2T1 843 aa14.33□□□□□ -0.12
CASP4-213ENST00000534356 ARHGAP33O14559 1287 aa14.32□□□□□ -0.12
CASP4-213ENST00000534356 TTC13Q8NBP0 860 aa14.32□□□□□ -0.12
CASP4-213ENST00000534356 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
CASP4-213ENST00000534356 TRIM66O15016 1216 aa14.3□□□□□ -0.12
CASP4-213ENST00000534356 KCNH8Q96L42 1107 aa14.3□□□□□ -0.12
CASP4-213ENST00000534356 FAM198AQ9UFP1 575 aa14.3□□□□□ -0.12
CASP4-213ENST00000534356 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
CASP4-213ENST00000534356 TSKSQ9UJT2 592 aa14.28□□□□□ -0.12
CASP4-213ENST00000534356 PBX2P40425 430 aa14.27□□□□□ -0.13
CASP4-213ENST00000534356 PROX2Q3B8N5 592 aa14.27□□□□□ -0.13
CASP4-213ENST00000534356 DMRTA1Q5VZB9 504 aa14.27□□□□□ -0.13
CASP4-213ENST00000534356 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
CASP4-213ENST00000534356 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
CASP4-213ENST00000534356 ADGRG1Q9Y653 693 aa14.25□□□□□ -0.13
CASP4-213ENST00000534356 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
CASP4-213ENST00000534356 C3orf80F5H4A9 247 aa14.22□□□□□ -0.13
CASP4-213ENST00000534356 PDE4DQ08499 809 aa14.22□□□□□ -0.13
CASP4-213ENST00000534356 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
CASP4-213ENST00000534356 PHOX2BQ99453 314 aa14.21□□□□□ -0.13
CASP4-213ENST00000534356 OATP04181 439 aa14.2□□□□□ -0.14
CASP4-213ENST00000534356 ONECUT3O60422 494 aaPredicted RBP14.19□□□□□ -0.14
CASP4-213ENST00000534356 METTL3Q86U44 580 aaKnown RBP14.19□□□□□ -0.14
CASP4-213ENST00000534356 PACS2Q86VP3 889 aa14.19□□□□□ -0.14
CASP4-213ENST00000534356 SLC4A5Q9BY07 1137 aa14.19□□□□□ -0.14
CASP4-213ENST00000534356 AMHR2Q16671 573 aa14.18□□□□□ -0.14
CASP4-213ENST00000534356 NUDT18Q6ZVK8 323 aa14.18□□□□□ -0.14
CASP4-213ENST00000534356 PXYLP1Q8TE99 480 aa14.18□□□□□ -0.14
CASP4-213ENST00000534356 KIAA1468Q9P260 1216 aa14.18□□□□□ -0.14
CASP4-213ENST00000534356 GPBP1L1Q9HC44 474 aaPredicted RBP14.17□□□□□ -0.14
CASP4-213ENST00000534356 RBM46Q8TBY0 533 aaKnown RBP14.16□□□□□ -0.14
CASP4-213ENST00000534356 TATDN2Q93075 761 aa14.16□□□□□ -0.14
CASP4-213ENST00000534356 EYA1Q99502 592 aa14.16□□□□□ -0.14
CASP4-213ENST00000534356 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
CASP4-213ENST00000534356 VPS9D1Q9Y2B5 631 aa14.16□□□□□ -0.14
CASP4-213ENST00000534356 SMAPO00193 183 aa14.15□□□□□ -0.14
CASP4-213ENST00000534356 NLRP7Q8WX94 980 aa14.15□□□□□ -0.14
CASP4-213ENST00000534356 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
CASP4-213ENST00000534356 RABGEF1Q9UJ41 708 aa14.14□□□□□ -0.15
CASP4-213ENST00000534356 LSM11P83369 360 aaKnown RBP eCLIP14.13□□□□□ -0.15
CASP4-213ENST00000534356 PARP9Q8IXQ6 854 aa14.12□□□□□ -0.15
CASP4-213ENST00000534356 TTLL12Q14166 644 aaPredicted RBP14.11□□□□□ -0.15
CASP4-213ENST00000534356 REPIN1Q9BWE0 567 aaKnown RBP14.11□□□□□ -0.15
CASP4-213ENST00000534356 TK2O00142 265 aa14.1□□□□□ -0.15
CASP4-213ENST00000534356 MDM2Q00987 491 aaPredicted RBP14.1□□□□□ -0.15
CASP4-213ENST00000534356 KDM4CQ9H3R0 1056 aa14.1□□□□□ -0.15
CASP4-213ENST00000534356 RCCD1A6NED2 376 aa14.09□□□□□ -0.15
CASP4-213ENST00000534356 SEPT9Q9UHD8 586 aaPredicted RBP14.09□□□□□ -0.15
CASP4-213ENST00000534356 ADGRD1Q6QNK2 874 aa14.08□□□□□ -0.16
CASP4-213ENST00000534356 TMUB1Q9BVT8 246 aa14.08□□□□□ -0.16
CASP4-213ENST00000534356 CLCN1P35523 988 aa14.07□□□□□ -0.16
CASP4-213ENST00000534356 ANKRD13DQ6ZTN6 518 aa14.07□□□□□ -0.16
CASP4-213ENST00000534356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.06□□□□□ -0.16
CASP4-213ENST00000534356 KRTAP3-3Q9BYR6 98 aa14.06□□□□□ -0.16
CASP4-213ENST00000534356 KRTAP3-2Q9BYR7 98 aa14.06□□□□□ -0.16
CASP4-213ENST00000534356 GPCPD1Q9NPB8 672 aa14.06□□□□□ -0.16
CASP4-213ENST00000534356 BHMG1C9JSJ3 638 aaPredicted RBP14.05□□□□□ -0.16
CASP4-213ENST00000534356 GIGYF2Q6Y7W6 1299 aaKnown RBP14.05□□□□□ -0.16
CASP4-213ENST00000534356 DNAJB2P25686 324 aa14.04□□□□□ -0.16
CASP4-213ENST00000534356 HRO43593 1189 aa14.02□□□□□ -0.17
CASP4-213ENST00000534356 NBPF3Q9H094 633 aa14.01□□□□□ -0.17
CASP4-213ENST00000534356 TMEM134Q9H6X4 195 aa14.01□□□□□ -0.17
CASP4-213ENST00000534356 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
CASP4-213ENST00000534356 CDAN1Q8IWY9 1227 aa14□□□□□ -0.17
CASP4-213ENST00000534356 MS4A1P11836 297 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms