RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
PHRF1-206ENST00000534320 HFM1A2PYH4 1435 aa21.99■■□□□ 1.11
PHRF1-206ENST00000534320 KIF7Q2M1P5 1343 aa21.99■■□□□ 1.11
PHRF1-206ENST00000534320 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
PHRF1-206ENST00000534320 DNTTIP2Q5QJE6 756 aaKnown RBP21.97■■□□□ 1.11
PHRF1-206ENST00000534320 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
PHRF1-206ENST00000534320 ARHGAP5Q13017 1502 aa21.97■■□□□ 1.11
PHRF1-206ENST00000534320 CALD1Q05682 793 aaKnown RBP21.96■■□□□ 1.11
PHRF1-206ENST00000534320 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
PHRF1-206ENST00000534320 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
PHRF1-206ENST00000534320 PTMAP06454 111 aaKnown RBP21.96■■□□□ 1.11
PHRF1-206ENST00000534320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.12e-6■■■□□ 15.2
PHRF1-206ENST00000534320 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
PHRF1-206ENST00000534320 EID1Q9Y6B2 187 aa21.93■■□□□ 1.1
PHRF1-206ENST00000534320 CUL7Q14999 1698 aa21.93■■□□□ 1.1
PHRF1-206ENST00000534320 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
PHRF1-206ENST00000534320 BIVM-ERCC5R4GMW8 1640 aa21.92■■□□□ 1.1
PHRF1-206ENST00000534320 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
PHRF1-206ENST00000534320 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
PHRF1-206ENST00000534320 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
PHRF1-206ENST00000534320 TSHZ2Q9NRE2 1034 aa21.91■■□□□ 1.1
PHRF1-206ENST00000534320 WASHC2AQ641Q2 1341 aa21.91■■□□□ 1.1
PHRF1-206ENST00000534320 TCERG1O14776 1098 aaKnown RBP21.91■■□□□ 1.1
PHRF1-206ENST00000534320 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
PHRF1-206ENST00000534320 PAK3O75914 559 aaPredicted RBP21.9■■□□□ 1.1
PHRF1-206ENST00000534320 EVC2Q86UK5 1308 aa21.9■■□□□ 1.1
PHRF1-206ENST00000534320 EPRSP07814 1512 aaKnown RBP21.9■■□□□ 1.1
PHRF1-206ENST00000534320 AFAP1Q8N556 730 aa21.9■■□□□ 1.1
PHRF1-206ENST00000534320 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
PHRF1-206ENST00000534320 IQGAP2Q13576 1575 aa21.88■■□□□ 1.09
PHRF1-206ENST00000534320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.09
PHRF1-206ENST00000534320 DEKP35659 375 aaKnown RBP21.87■■□□□ 1.09
PHRF1-206ENST00000534320 CGNL1Q0VF96 1302 aa21.87■■□□□ 1.09
PHRF1-206ENST00000534320 CDK13Q14004 1512 aaKnown RBP21.87■■□□□ 1.09
PHRF1-206ENST00000534320 ITPRIPQ8IWB1 547 aa21.87■■□□□ 1.09
PHRF1-206ENST00000534320 RWDD1Q9H446 243 aaPredicted RBP21.87■■□□□ 1.09
PHRF1-206ENST00000534320 OS9Q13438 667 aaPredicted RBP21.87■■□□□ 1.09
PHRF1-206ENST00000534320 CENPJQ9HC77 1338 aaPredicted RBP21.87■■□□□ 1.09
PHRF1-206ENST00000534320 DAPK1P53355 1430 aa21.86■■□□□ 1.09
PHRF1-206ENST00000534320 SMC4Q9NTJ3 1288 aa21.85■■□□□ 1.09
PHRF1-206ENST00000534320 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
PHRF1-206ENST00000534320 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
PHRF1-206ENST00000534320 RRP7AQ9Y3A4 280 aaKnown RBP21.82■■□□□ 1.08
PHRF1-206ENST00000534320 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
PHRF1-206ENST00000534320 NAIPQ13075 1403 aa21.81■■□□□ 1.08
PHRF1-206ENST00000534320 HSP90AB1P08238 724 aaKnown RBP21.81■■□□□ 1.08
PHRF1-206ENST00000534320 NGDNQ8NEJ9 315 aaKnown RBP21.81■■□□□ 1.08
PHRF1-206ENST00000534320 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
PHRF1-206ENST00000534320 MINK1Q8N4C8 1332 aaPredicted RBP21.81■■□□□ 1.08
PHRF1-206ENST00000534320 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
PHRF1-206ENST00000534320 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
PHRF1-206ENST00000534320 CLUAP1Q96AJ1 413 aa21.79■■□□□ 1.08
PHRF1-206ENST00000534320 NUTM2FA1L443 756 aa21.79■■□□□ 1.08
PHRF1-206ENST00000534320 NBPF8Q3BBV2 869 aa21.79■■□□□ 1.08
PHRF1-206ENST00000534320 RRP1P56182 461 aaKnown RBP21.77■■□□□ 1.08
PHRF1-206ENST00000534320 HSCBQ8IWL3 235 aa21.77■■□□□ 1.08
PHRF1-206ENST00000534320 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
PHRF1-206ENST00000534320 E9PSI1 815 aa21.76■■□□□ 1.07
PHRF1-206ENST00000534320 ROCK1Q13464 1354 aa21.75■■□□□ 1.07
PHRF1-206ENST00000534320 APAF1O14727 1248 aa21.75■■□□□ 1.07
PHRF1-206ENST00000534320 PLIN1O60240 522 aa21.74■■□□□ 1.07
PHRF1-206ENST00000534320 CFAP44Q96MT7 982 aa21.73■■□□□ 1.07
PHRF1-206ENST00000534320 APBB1O00213 710 aa21.73■■□□□ 1.07
PHRF1-206ENST00000534320 L1TD1Q5T7N2 865 aaKnown RBP21.73■■□□□ 1.07
PHRF1-206ENST00000534320 AMPHP49418 695 aa21.73■■□□□ 1.07
PHRF1-206ENST00000534320 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
PHRF1-206ENST00000534320 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
PHRF1-206ENST00000534320 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
PHRF1-206ENST00000534320 COG3Q96JB2 828 aa21.71■■□□□ 1.07
PHRF1-206ENST00000534320 STK31Q9BXU1 1019 aa21.71■■□□□ 1.07
PHRF1-206ENST00000534320 NBPF1Q3BBV0 1214 aa21.71■■□□□ 1.07
PHRF1-206ENST00000534320 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
PHRF1-206ENST00000534320 BRD4O60885 1362 aaPredicted RBP21.69■■□□□ 1.06
PHRF1-206ENST00000534320 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
PHRF1-206ENST00000534320 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
PHRF1-206ENST00000534320 KCNJ4P48050 445 aa21.68■■□□□ 1.06
PHRF1-206ENST00000534320 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
PHRF1-206ENST00000534320 NGEFQ8N5V2 710 aa21.68■■□□□ 1.06
PHRF1-206ENST00000534320 CSB-PGBD3P0DP91 1061 aa21.68■■□□□ 1.06
PHRF1-206ENST00000534320 TMEM132EQ6IEE7 984 aa21.67■■□□□ 1.06
PHRF1-206ENST00000534320 CHMP4AQ9BY43 222 aa21.67■■□□□ 1.06
PHRF1-206ENST00000534320 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
PHRF1-206ENST00000534320 ZRSR1Q15695 479 aaKnown RBP21.66■■□□□ 1.06
PHRF1-206ENST00000534320 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
PHRF1-206ENST00000534320 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
PHRF1-206ENST00000534320 MCCP23508 829 aa21.65■■□□□ 1.06
PHRF1-206ENST00000534320 SPRYD3Q8NCJ5 442 aa21.65■■□□□ 1.06
PHRF1-206ENST00000534320 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
PHRF1-206ENST00000534320 CHAF1AQ13111 956 aaPredicted RBP21.65■■□□□ 1.06
PHRF1-206ENST00000534320 CENPQQ7L2Z9 268 aaPredicted RBP21.65■■□□□ 1.06
PHRF1-206ENST00000534320 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.65■■□□□ 1.06
PHRF1-206ENST00000534320 AMER1Q5JTC6 1135 aaPredicted RBP21.64■■□□□ 1.06
PHRF1-206ENST00000534320 LTV1Q96GA3 475 aaPredicted RBP21.63■■□□□ 1.05
PHRF1-206ENST00000534320 IPO9Q96P70 1041 aaKnown RBP21.63■■□□□ 1.05
PHRF1-206ENST00000534320 CAMSAP2Q08AD1 1489 aa21.63■■□□□ 1.05
PHRF1-206ENST00000534320 ABCC5O15440 1437 aa21.63■■□□□ 1.05
PHRF1-206ENST00000534320 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
PHRF1-206ENST00000534320 MSNP26038 577 aaKnown RBP21.63■■□□□ 1.05
PHRF1-206ENST00000534320 TPRNQ4KMQ1 711 aa21.62■■□□□ 1.05
PHRF1-206ENST00000534320 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms