RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
ATM-223ENST00000533979 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
ATM-223ENST00000533979 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
ATM-223ENST00000533979 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
ATM-223ENST00000533979 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
ATM-223ENST00000533979 OSBPP22059 807 aa11.25□□□□□ -0.61
ATM-223ENST00000533979 NBR1Q14596 966 aa11.25□□□□□ -0.61
ATM-223ENST00000533979 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
ATM-223ENST00000533979 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
ATM-223ENST00000533979 HRO43593 1189 aa11.24□□□□□ -0.61
ATM-223ENST00000533979 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
ATM-223ENST00000533979 RBM33Q96EV2 1170 aaKnown RBP11.24□□□□□ -0.61
ATM-223ENST00000533979 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
ATM-223ENST00000533979 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
ATM-223ENST00000533979 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
ATM-223ENST00000533979 COL9A1P20849 921 aa11.21□□□□□ -0.61
ATM-223ENST00000533979 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
ATM-223ENST00000533979 MAP3K7O43318 606 aa11.2□□□□□ -0.62
ATM-223ENST00000533979 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
ATM-223ENST00000533979 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
ATM-223ENST00000533979 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
ATM-223ENST00000533979 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
ATM-223ENST00000533979 SEMA3EO15041 775 aa11.17□□□□□ -0.62
ATM-223ENST00000533979 TSR1Q2NL82 804 aaKnown RBP11.16□□□□□ -0.62
ATM-223ENST00000533979 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
ATM-223ENST00000533979 RABGEF1Q9UJ41 708 aa11.16□□□□□ -0.62
ATM-223ENST00000533979 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
ATM-223ENST00000533979 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
ATM-223ENST00000533979 PROX2Q3B8N5 592 aa11.13□□□□□ -0.63
ATM-223ENST00000533979 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
ATM-223ENST00000533979 TRIM6-TRIM34B2RNG4 842 aa11.11□□□□□ -0.63
ATM-223ENST00000533979 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
ATM-223ENST00000533979 PRSS12P56730 875 aa11.1□□□□□ -0.63
ATM-223ENST00000533979 PACS2Q86VP3 889 aa11.1□□□□□ -0.63
ATM-223ENST00000533979 MRPL50Q8N5N7 158 aaKnown RBP11.1□□□□□ -0.63
ATM-223ENST00000533979 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
ATM-223ENST00000533979 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
ATM-223ENST00000533979 LAPTM4BQ86VI4 370 aa11.08□□□□□ -0.64
ATM-223ENST00000533979 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
ATM-223ENST00000533979 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
ATM-223ENST00000533979 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
ATM-223ENST00000533979 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
ATM-223ENST00000533979 PTGDRQ13258 359 aa11.03□□□□□ -0.64
ATM-223ENST00000533979 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
ATM-223ENST00000533979 HCSTQ9UBK5 93 aa11.03□□□□□ -0.64
ATM-223ENST00000533979 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
ATM-223ENST00000533979 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
ATM-223ENST00000533979 FAM198AQ9UFP1 575 aa11.01□□□□□ -0.65
ATM-223ENST00000533979 TATDN2Q93075 761 aa11□□□□□ -0.65
ATM-223ENST00000533979 WNT2BQ93097 391 aa11□□□□□ -0.65
ATM-223ENST00000533979 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
ATM-223ENST00000533979 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
ATM-223ENST00000533979 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
ATM-223ENST00000533979 FCHSD2O94868 740 aa10.98□□□□□ -0.65
ATM-223ENST00000533979 SEPT9Q9UHD8 586 aaPredicted RBP10.97□□□□□ -0.65
ATM-223ENST00000533979 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
ATM-223ENST00000533979 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
ATM-223ENST00000533979 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
ATM-223ENST00000533979 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
ATM-223ENST00000533979 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
ATM-223ENST00000533979 ANKK1Q8NFD2 765 aa10.95□□□□□ -0.66
ATM-223ENST00000533979 PNMA3Q9UL41 463 aa10.95□□□□□ -0.66
ATM-223ENST00000533979 SOWAHBA6NEL2 793 aa10.93□□□□□ -0.66
ATM-223ENST00000533979 C3orf80F5H4A9 247 aa10.93□□□□□ -0.66
ATM-223ENST00000533979 PTPN5P54829 565 aa10.93□□□□□ -0.66
ATM-223ENST00000533979 HIC1Q14526 733 aa10.93□□□□□ -0.66
ATM-223ENST00000533979 SMAPO00193 183 aa10.92□□□□□ -0.66
ATM-223ENST00000533979 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
ATM-223ENST00000533979 EYA1Q99502 592 aa10.92□□□□□ -0.66
ATM-223ENST00000533979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
ATM-223ENST00000533979 GNPATO15228 680 aa10.88□□□□□ -0.67
ATM-223ENST00000533979 LRCH3Q96II8 777 aa10.88□□□□□ -0.67
ATM-223ENST00000533979 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
ATM-223ENST00000533979 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
ATM-223ENST00000533979 RBM46Q8TBY0 533 aaKnown RBP10.87□□□□□ -0.67
ATM-223ENST00000533979 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
ATM-223ENST00000533979 OATP04181 439 aa10.86□□□□□ -0.67
ATM-223ENST00000533979 BCAMP50895 628 aa10.86□□□□□ -0.67
ATM-223ENST00000533979 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
ATM-223ENST00000533979 GPR37O15354 613 aa10.85□□□□□ -0.67
ATM-223ENST00000533979 NYAP1Q6ZVC0 841 aa10.85□□□□□ -0.67
ATM-223ENST00000533979 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
ATM-223ENST00000533979 TSR3Q9UJK0 312 aaKnown RBP10.85□□□□□ -0.67
ATM-223ENST00000533979 PPP4CP60510 307 aa10.83□□□□□ -0.68
ATM-223ENST00000533979 FECHP22830 423 aa10.82□□□□□ -0.68
ATM-223ENST00000533979 WBP1LQ9NX94 342 aa10.82□□□□□ -0.68
ATM-223ENST00000533979 DNAJB2P25686 324 aa10.8□□□□□ -0.68
ATM-223ENST00000533979 HPS5Q9UPZ3 1129 aa10.8□□□□□ -0.68
ATM-223ENST00000533979 FAM161AQ3B820 660 aa10.79□□□□□ -0.68
ATM-223ENST00000533979 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
ATM-223ENST00000533979 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
ATM-223ENST00000533979 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
ATM-223ENST00000533979 SLC4A3P48751 1232 aa10.78□□□□□ -0.68
ATM-223ENST00000533979 SLF2Q8IX21 1173 aa10.78□□□□□ -0.68
ATM-223ENST00000533979 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
ATM-223ENST00000533979 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
ATM-223ENST00000533979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.77□□□□□ -0.69
ATM-223ENST00000533979 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
ATM-223ENST00000533979 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
ATM-223ENST00000533979 IFFO2Q5TF58 517 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms