RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 BCANQ96GW7 911 aa6.15□□□□□ -1.43
CTSC-208ENST00000533897 ZC3H13Q5T200 1668 aaKnown RBP6.15□□□□□ -1.43
CTSC-208ENST00000533897 CCDC141Q6ZP82 1450 aa6.14□□□□□ -1.43
CTSC-208ENST00000533897 VIRMAQ69YN4 1812 aaKnown RBP6.14□□□□□ -1.43
CTSC-208ENST00000533897 CLASP1Q7Z460 1538 aa6.14□□□□□ -1.43
CTSC-208ENST00000533897 MYO3AQ8NEV4 1616 aa6.14□□□□□ -1.43
CTSC-208ENST00000533897 PARD3Q8TEW0 1356 aa6.14□□□□□ -1.43
CTSC-208ENST00000533897 SYCP2Q9BX26 1530 aa6.14□□□□□ -1.43
CTSC-208ENST00000533897 MROH1Q8NDA8 1641 aa6.14□□□□□ -1.43
CTSC-208ENST00000533897 BLMP54132 1417 aaPredicted RBP6.14□□□□□ -1.43
CTSC-208ENST00000533897 KTN1Q86UP2 1357 aaKnown RBP6.14□□□□□ -1.43
CTSC-208ENST00000533897 ZCCHC11Q5TAX3 1644 aaKnown RBP6.14□□□□□ -1.43
CTSC-208ENST00000533897 ANKRD30AQ9BXX3 1397 aa6.13□□□□□ -1.43
CTSC-208ENST00000533897 ERCC6L2Q5T890 1561 aa6.13□□□□□ -1.43
CTSC-208ENST00000533897 ABCC1P33527 1531 aa6.13□□□□□ -1.43
CTSC-208ENST00000533897 ARAP3Q8WWN8 1544 aa6.13□□□□□ -1.43
CTSC-208ENST00000533897 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
CTSC-208ENST00000533897 INO80Q9ULG1 1556 aaPredicted RBP6.13□□□□□ -1.43
CTSC-208ENST00000533897 ROCK2O75116 1388 aaKnown RBP6.13□□□□□ -1.43
CTSC-208ENST00000533897 DUOX2Q9NRD8 1548 aa6.12□□□□□ -1.43
CTSC-208ENST00000533897 PNISRQ8TF01 805 aaKnown RBP6.12□□□□□ -1.43
CTSC-208ENST00000533897 ABCC2Q92887 1545 aa6.12□□□□□ -1.43
CTSC-208ENST00000533897 ABCA9Q8IUA7 1624 aa6.12□□□□□ -1.43
CTSC-208ENST00000533897 PPP4R2Q9NY27 417 aa6.12□□□□□ -1.43
CTSC-208ENST00000533897 TRPM2O94759 1503 aa6.11□□□□□ -1.43
CTSC-208ENST00000533897 SYNMO15061 1565 aa6.11□□□□□ -1.43
CTSC-208ENST00000533897 CARMIL2Q6F5E8 1435 aa6.11□□□□□ -1.43
CTSC-208ENST00000533897 CLTCL1P53675 1640 aa6.11□□□□□ -1.43
CTSC-208ENST00000533897 TET3O43151 1660 aa6.11□□□□□ -1.43
CTSC-208ENST00000533897 BRD4O60885 1362 aaPredicted RBP6.1□□□□□ -1.43
CTSC-208ENST00000533897 UHRF1BP1LA0JNW5 1464 aa6.1□□□□□ -1.43
CTSC-208ENST00000533897 ZFYVE16Q7Z3T8 1539 aa6.1□□□□□ -1.43
CTSC-208ENST00000533897 PER1O15534 1290 aaPredicted RBP6.1□□□□□ -1.43
CTSC-208ENST00000533897 ERBINQ96RT1 1412 aa6.1□□□□□ -1.43
CTSC-208ENST00000533897 WDR7Q9Y4E6 1490 aa6.1□□□□□ -1.43
CTSC-208ENST00000533897 SLC4A1APQ9BWU0 796 aaKnown RBP6.1□□□□□ -1.43
CTSC-208ENST00000533897 MROH2AA6NES4 1674 aa6.09□□□□□ -1.43
CTSC-208ENST00000533897 SHPRHQ149N8 1683 aa6.09□□□□□ -1.43
CTSC-208ENST00000533897 KIF15Q9NS87 1388 aa6.09□□□□□ -1.43
CTSC-208ENST00000533897 ERCC6Q03468 1493 aa6.09□□□□□ -1.43
CTSC-208ENST00000533897 PTPRTO14522 1441 aa6.09□□□□□ -1.44
CTSC-208ENST00000533897 PKD2Q13563 968 aa6.08□□□□□ -1.44
CTSC-208ENST00000533897 TESK2Q96S53 571 aa6.08□□□□□ -1.44
CTSC-208ENST00000533897 CFDP1Q9UEE9 299 aaPredicted RBP6.08□□□□□ -1.44
CTSC-208ENST00000533897 NUDCQ9Y266 331 aa6.08□□□□□ -1.44
CTSC-208ENST00000533897 JPH4Q96JJ6 628 aa6.08□□□□□ -1.44
CTSC-208ENST00000533897 NRXN1Q9ULB1 1477 aa6.08□□□□□ -1.44
CTSC-208ENST00000533897 NEFLP07196 543 aa6.07□□□□□ -1.44
CTSC-208ENST00000533897 ABCA6Q8N139 1617 aa6.07□□□□□ -1.44
CTSC-208ENST00000533897 MRS2Q9HD23 443 aa6.07□□□□□ -1.44
CTSC-208ENST00000533897 USP32Q8NFA0 1604 aa6.07□□□□□ -1.44
CTSC-208ENST00000533897 CDK11AQ9UQ88 783 aaPredicted RBP6.07□□□□□ -1.44
CTSC-208ENST00000533897 SCAPERQ9BY12 1400 aa6.07□□□□□ -1.44
CTSC-208ENST00000533897 IRX6P78412 446 aaPredicted RBP6.06□□□□□ -1.44
CTSC-208ENST00000533897 NUP155O75694 1391 aa6.06□□□□□ -1.44
CTSC-208ENST00000533897 PLEKHH2Q8IVE3 1493 aa6.06□□□□□ -1.44
CTSC-208ENST00000533897 DISP3Q9P2K9 1392 aa6.06□□□□□ -1.44
CTSC-208ENST00000533897 PPRC1Q5VV67 1664 aaKnown RBP6.06□□□□□ -1.44
CTSC-208ENST00000533897 MAP3K4Q9Y6R4 1608 aa6.06□□□□□ -1.44
CTSC-208ENST00000533897 PPLO60437 1756 aa6.06□□□□□ -1.44
CTSC-208ENST00000533897 KDM5AP29375 1690 aaKnown RBP6.05□□□□□ -1.44
CTSC-208ENST00000533897 MYBBP1AQ9BQG0 1328 aaKnown RBP6.05□□□□□ -1.44
CTSC-208ENST00000533897 KIDINS220Q9ULH0 1771 aa6.05□□□□□ -1.44
CTSC-208ENST00000533897 PLCH2O75038 1416 aa6.05□□□□□ -1.44
CTSC-208ENST00000533897 ARHGAP5Q13017 1502 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 LMTK2Q8IWU2 1503 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 ARID3CA6NKF2 412 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 RTEL1-TNFRSF6BF6WH68 1400 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 ZNF521Q96K83 1311 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 WASHC2CQ9Y4E1 1318 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 MYOM2P54296 1465 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 SETBP1Q9Y6X0 1596 aa6.04□□□□□ -1.44
CTSC-208ENST00000533897 PIK3C2BO00750 1634 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 B4GALNT3Q6L9W6 998 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 FAM9BQ8IZU0 186 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 KIF1BO60333 1816 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 ST20-MTHFSA0A0A6YYL1 179 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 RALBP1Q15311 655 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 BCL11AQ9H165 835 aa6.03□□□□□ -1.44
CTSC-208ENST00000533897 SIGLEC1Q9BZZ2 1709 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 CCDC144AA2RUR9 1427 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 ZNF518AQ6AHZ1 1483 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 EFCAB6Q5THR3 1501 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 RSPH4AQ5TD94 716 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 NPC1L1Q9UHC9 1359 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 ADGRB3O60242 1522 aa6.02□□□□□ -1.45
CTSC-208ENST00000533897 FRMPD1Q5SYB0 1578 aa6.01□□□□□ -1.45
CTSC-208ENST00000533897 TRAPPC8Q9Y2L5 1435 aa6.01□□□□□ -1.45
CTSC-208ENST00000533897 HNRNPMP52272 730 aaKnown RBP eCLIP6.01□□□□□ -1.45
CTSC-208ENST00000533897 ADGRB1O14514 1584 aa6.01□□□□□ -1.45
CTSC-208ENST00000533897 PIK3C2GO75747 1445 aa6.01□□□□□ -1.45
CTSC-208ENST00000533897 PAK3O75914 559 aaPredicted RBP6.01□□□□□ -1.45
CTSC-208ENST00000533897 ATP7AQ04656 1500 aa6□□□□□ -1.45
CTSC-208ENST00000533897 CHMP7Q8WUX9 453 aaPredicted RBP6□□□□□ -1.45
CTSC-208ENST00000533897 ASXL1Q8IXJ9 1541 aa6□□□□□ -1.45
CTSC-208ENST00000533897 IQSEC2Q5JU85 1478 aa6□□□□□ -1.45
CTSC-208ENST00000533897 QRICH2Q9H0J4 1663 aa6□□□□□ -1.45
CTSC-208ENST00000533897 KDM2BQ8NHM5 1336 aa6□□□□□ -1.45
CTSC-208ENST00000533897 RRP1P56182 461 aaKnown RBP6□□□□□ -1.45
CTSC-208ENST00000533897 NBPF1Q3BBV0 1214 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms