RNA–Protein interactions for RNA: ENST00000533734.1

TCN1-204, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-204ENST00000533734 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
TCN1-204ENST00000533734 DDX12PQ92771 950 aa11.47□□□□□ -0.57
TCN1-204ENST00000533734 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
TCN1-204ENST00000533734 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
TCN1-204ENST00000533734 COL9A1P20849 921 aa11.44□□□□□ -0.58
TCN1-204ENST00000533734 EN1Q05925 392 aaPredicted RBP11.43□□□□□ -0.58
TCN1-204ENST00000533734 NBR1Q14596 966 aa11.43□□□□□ -0.58
TCN1-204ENST00000533734 C6orf132Q5T0Z8 1188 aa11.43□□□□□ -0.58
TCN1-204ENST00000533734 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
TCN1-204ENST00000533734 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
TCN1-204ENST00000533734 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
TCN1-204ENST00000533734 RABGEF1Q9UJ41 708 aa11.4□□□□□ -0.58
TCN1-204ENST00000533734 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
TCN1-204ENST00000533734 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
TCN1-204ENST00000533734 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
TCN1-204ENST00000533734 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
TCN1-204ENST00000533734 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
TCN1-204ENST00000533734 MAP3K7O43318 606 aa11.37□□□□□ -0.59
TCN1-204ENST00000533734 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
TCN1-204ENST00000533734 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
TCN1-204ENST00000533734 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
TCN1-204ENST00000533734 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
TCN1-204ENST00000533734 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
TCN1-204ENST00000533734 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
TCN1-204ENST00000533734 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
TCN1-204ENST00000533734 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
TCN1-204ENST00000533734 OSBPP22059 807 aa11.32□□□□□ -0.6
TCN1-204ENST00000533734 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
TCN1-204ENST00000533734 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
TCN1-204ENST00000533734 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
TCN1-204ENST00000533734 WNT2BQ93097 391 aa11.31□□□□□ -0.6
TCN1-204ENST00000533734 KIAA1468Q9P260 1216 aa11.31□□□□□ -0.6
TCN1-204ENST00000533734 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
TCN1-204ENST00000533734 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
TCN1-204ENST00000533734 PTPN5P54829 565 aa11.25□□□□□ -0.61
TCN1-204ENST00000533734 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
TCN1-204ENST00000533734 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
TCN1-204ENST00000533734 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
TCN1-204ENST00000533734 PRSS12P56730 875 aa11.24□□□□□ -0.61
TCN1-204ENST00000533734 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
TCN1-204ENST00000533734 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
TCN1-204ENST00000533734 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
TCN1-204ENST00000533734 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
TCN1-204ENST00000533734 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
TCN1-204ENST00000533734 MLLT3P42568 568 aaPredicted RBP11.22□□□□□ -0.61
TCN1-204ENST00000533734 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
TCN1-204ENST00000533734 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
TCN1-204ENST00000533734 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
TCN1-204ENST00000533734 BCAMP50895 628 aa11.18□□□□□ -0.62
TCN1-204ENST00000533734 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
TCN1-204ENST00000533734 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
TCN1-204ENST00000533734 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
TCN1-204ENST00000533734 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
TCN1-204ENST00000533734 IFFO2Q5TF58 517 aa11.15□□□□□ -0.62
TCN1-204ENST00000533734 LRCH3Q96II8 777 aa11.15□□□□□ -0.62
TCN1-204ENST00000533734 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
TCN1-204ENST00000533734 TATDN2Q93075 761 aa11.14□□□□□ -0.63
TCN1-204ENST00000533734 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
TCN1-204ENST00000533734 SEMA3EO15041 775 aa11.13□□□□□ -0.63
TCN1-204ENST00000533734 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
TCN1-204ENST00000533734 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
TCN1-204ENST00000533734 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
TCN1-204ENST00000533734 SMAPO00193 183 aa11.11□□□□□ -0.63
TCN1-204ENST00000533734 PTGDRQ13258 359 aa11.11□□□□□ -0.63
TCN1-204ENST00000533734 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
TCN1-204ENST00000533734 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
TCN1-204ENST00000533734 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
TCN1-204ENST00000533734 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
TCN1-204ENST00000533734 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
TCN1-204ENST00000533734 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
TCN1-204ENST00000533734 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
TCN1-204ENST00000533734 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
TCN1-204ENST00000533734 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
TCN1-204ENST00000533734 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
TCN1-204ENST00000533734 FCHSD2O94868 740 aa11.02□□□□□ -0.65
TCN1-204ENST00000533734 EYA1Q99502 592 aa11.02□□□□□ -0.65
TCN1-204ENST00000533734 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
TCN1-204ENST00000533734 PPP4CP60510 307 aa11.01□□□□□ -0.65
TCN1-204ENST00000533734 A0A0G2JS52 829 aa11□□□□□ -0.65
TCN1-204ENST00000533734 NECTIN2Q92692 538 aa11□□□□□ -0.65
TCN1-204ENST00000533734 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
TCN1-204ENST00000533734 SWT1Q5T5J6 900 aaKnown RBP10.97□□□□□ -0.65
TCN1-204ENST00000533734 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
TCN1-204ENST00000533734 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
TCN1-204ENST00000533734 RNF40O75150 1001 aa10.96□□□□□ -0.65
TCN1-204ENST00000533734 RGS20O76081 388 aa10.96□□□□□ -0.65
TCN1-204ENST00000533734 DNAJB2P25686 324 aa10.96□□□□□ -0.65
TCN1-204ENST00000533734 HIC1Q14526 733 aa10.96□□□□□ -0.65
TCN1-204ENST00000533734 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
TCN1-204ENST00000533734 KCNC4Q03721 635 aa10.95□□□□□ -0.66
TCN1-204ENST00000533734 GPR37O15354 613 aa10.94□□□□□ -0.66
TCN1-204ENST00000533734 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
TCN1-204ENST00000533734 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
TCN1-204ENST00000533734 APLP1P51693 650 aa10.91□□□□□ -0.66
TCN1-204ENST00000533734 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
TCN1-204ENST00000533734 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.89□□□□□ -0.67
TCN1-204ENST00000533734 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
TCN1-204ENST00000533734 GNPATO15228 680 aa10.89□□□□□ -0.67
TCN1-204ENST00000533734 OATP04181 439 aa10.89□□□□□ -0.67
TCN1-204ENST00000533734 FAM161AQ3B820 660 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms