RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ZCCHC11Q5TAX3 1644 aaKnown RBP21.11■□□□□ 0.97
CACNA1E-208ENST00000533229 ARID4BQ4LE39 1312 aaPredicted RBP21.11■□□□□ 0.97
CACNA1E-208ENST00000533229 ST20-MTHFSA0A0A6YYL1 179 aa21.11■□□□□ 0.97
CACNA1E-208ENST00000533229 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
CACNA1E-208ENST00000533229 CNGB1Q14028 1251 aaPredicted RBP21.1■□□□□ 0.97
CACNA1E-208ENST00000533229 EFCAB2Q5VUJ9 269 aa21.1■□□□□ 0.97
CACNA1E-208ENST00000533229 TSHZ2Q9NRE2 1034 aa21.1■□□□□ 0.97
CACNA1E-208ENST00000533229 UNC13BO14795 1591 aa21.09■□□□□ 0.97
CACNA1E-208ENST00000533229 PLXNC1O60486 1568 aa21.08■□□□□ 0.97
CACNA1E-208ENST00000533229 RGL3Q3MIN7 710 aa21.08■□□□□ 0.97
CACNA1E-208ENST00000533229 TRAPPC8Q9Y2L5 1435 aa21.07■□□□□ 0.96
CACNA1E-208ENST00000533229 MYT1Q01538 1121 aa21.07■□□□□ 0.96
CACNA1E-208ENST00000533229 ROCK2O75116 1388 aaKnown RBP21.06■□□□□ 0.96
CACNA1E-208ENST00000533229 DUOX2Q9NRD8 1548 aa21.05■□□□□ 0.96
CACNA1E-208ENST00000533229 PRAG1Q86YV5 1406 aa21.04■□□□□ 0.96
CACNA1E-208ENST00000533229 NBPF1Q3BBV0 1214 aa21.03■□□□□ 0.96
CACNA1E-208ENST00000533229 ERBINQ96RT1 1412 aa21.03■□□□□ 0.96
CACNA1E-208ENST00000533229 ABCC1P33527 1531 aa21.02■□□□□ 0.96
CACNA1E-208ENST00000533229 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.96
CACNA1E-208ENST00000533229 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
CACNA1E-208ENST00000533229 A2MP01023 1474 aa21.01■□□□□ 0.95
CACNA1E-208ENST00000533229 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
CACNA1E-208ENST00000533229 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
CACNA1E-208ENST00000533229 IRX6P78412 446 aaPredicted RBP20.99■□□□□ 0.95
CACNA1E-208ENST00000533229 ATP10AO60312 1499 aa20.97■□□□□ 0.95
CACNA1E-208ENST00000533229 TRPM1Q7Z4N2 1603 aa20.96■□□□□ 0.95
CACNA1E-208ENST00000533229 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
CACNA1E-208ENST00000533229 GPRASP1Q5JY77 1395 aa20.94■□□□□ 0.94
CACNA1E-208ENST00000533229 WDR7Q9Y4E6 1490 aa20.92■□□□□ 0.94
CACNA1E-208ENST00000533229 RTEL1-TNFRSF6BF6WH68 1400 aa20.92■□□□□ 0.94
CACNA1E-208ENST00000533229 ARAP3Q8WWN8 1544 aa20.91■□□□□ 0.94
CACNA1E-208ENST00000533229 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
CACNA1E-208ENST00000533229 ZFYVE16Q7Z3T8 1539 aa20.89■□□□□ 0.94
CACNA1E-208ENST00000533229 TESK2Q96S53 571 aa20.89■□□□□ 0.93
CACNA1E-208ENST00000533229 FANCAO15360 1455 aa20.87■□□□□ 0.93
CACNA1E-208ENST00000533229 TMC1Q8TDI8 760 aa20.87■□□□□ 0.93
CACNA1E-208ENST00000533229 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
CACNA1E-208ENST00000533229 PRDM15P57071 1507 aaPredicted RBP20.85■□□□□ 0.93
CACNA1E-208ENST00000533229 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
CACNA1E-208ENST00000533229 PER1O15534 1290 aaPredicted RBP20.84■□□□□ 0.93
CACNA1E-208ENST00000533229 E9PCH4 1651 aa20.84■□□□□ 0.93
CACNA1E-208ENST00000533229 RALBP1Q15311 655 aa20.83■□□□□ 0.93
CACNA1E-208ENST00000533229 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.93
CACNA1E-208ENST00000533229 ABCA9Q8IUA7 1624 aa20.82■□□□□ 0.92
CACNA1E-208ENST00000533229 SCAPERQ9BY12 1400 aa20.81■□□□□ 0.92
CACNA1E-208ENST00000533229 COL17A1Q9UMD9 1497 aaPredicted RBP20.81■□□□□ 0.92
CACNA1E-208ENST00000533229 LAMC1P11047 1609 aa20.81■□□□□ 0.92
CACNA1E-208ENST00000533229 ASXL2Q76L83 1435 aa20.81■□□□□ 0.92
CACNA1E-208ENST00000533229 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
CACNA1E-208ENST00000533229 PTPRTO14522 1441 aa20.8■□□□□ 0.92
CACNA1E-208ENST00000533229 ATP7AQ04656 1500 aa20.8■□□□□ 0.92
CACNA1E-208ENST00000533229 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
CACNA1E-208ENST00000533229 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
CACNA1E-208ENST00000533229 LRPPRCP42704 1394 aaKnown RBP20.79■□□□□ 0.92
CACNA1E-208ENST00000533229 KIF3BO15066 747 aa20.79■□□□□ 0.92
CACNA1E-208ENST00000533229 ERICH6BQ5W0A0 696 aa20.79■□□□□ 0.92
CACNA1E-208ENST00000533229 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
CACNA1E-208ENST00000533229 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
CACNA1E-208ENST00000533229 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
CACNA1E-208ENST00000533229 TRPM2O94759 1503 aa20.78■□□□□ 0.92
CACNA1E-208ENST00000533229 PARD3Q8TEW0 1356 aa20.77■□□□□ 0.92
CACNA1E-208ENST00000533229 INO80Q9ULG1 1556 aaPredicted RBP20.77■□□□□ 0.92
CACNA1E-208ENST00000533229 DEPDC5O75140 1603 aa20.77■□□□□ 0.91
CACNA1E-208ENST00000533229 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
CACNA1E-208ENST00000533229 TMF1P82094 1093 aa20.75■□□□□ 0.91
CACNA1E-208ENST00000533229 PANK3Q9H999 370 aa20.75■□□□□ 0.91
CACNA1E-208ENST00000533229 PPP4R2Q9NY27 417 aa20.75■□□□□ 0.91
CACNA1E-208ENST00000533229 RBM19Q9Y4C8 960 aaKnown RBP20.74■□□□□ 0.91
CACNA1E-208ENST00000533229 VWDEQ8N2E2 1590 aa20.74■□□□□ 0.91
CACNA1E-208ENST00000533229 KANK1Q14678 1352 aa20.72■□□□□ 0.91
CACNA1E-208ENST00000533229 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
CACNA1E-208ENST00000533229 CLTCL1P53675 1640 aa20.72■□□□□ 0.91
CACNA1E-208ENST00000533229 MADDQ8WXG6 1647 aa20.72■□□□□ 0.91
CACNA1E-208ENST00000533229 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
CACNA1E-208ENST00000533229 CC2D1BQ5T0F9 858 aaKnown RBP20.72■□□□□ 0.91
CACNA1E-208ENST00000533229 TET3O43151 1660 aa20.7■□□□□ 0.9
CACNA1E-208ENST00000533229 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
CACNA1E-208ENST00000533229 SPHKAPQ2M3C7 1700 aa20.69■□□□□ 0.9
CACNA1E-208ENST00000533229 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
CACNA1E-208ENST00000533229 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
CACNA1E-208ENST00000533229 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
CACNA1E-208ENST00000533229 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
CACNA1E-208ENST00000533229 STAC3Q96MF2 364 aa20.67■□□□□ 0.9
CACNA1E-208ENST00000533229 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
CACNA1E-208ENST00000533229 CEP152O94986 1710 aa20.66■□□□□ 0.9
CACNA1E-208ENST00000533229 UGGT1Q9NYU2 1555 aa20.65■□□□□ 0.9
CACNA1E-208ENST00000533229 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
CACNA1E-208ENST00000533229 SCAF11Q99590 1463 aaKnown RBP20.64■□□□□ 0.89
CACNA1E-208ENST00000533229 KIDINS220Q9ULH0 1771 aa20.63■□□□□ 0.89
CACNA1E-208ENST00000533229 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
CACNA1E-208ENST00000533229 ZNF518AQ6AHZ1 1483 aa20.62■□□□□ 0.89
CACNA1E-208ENST00000533229 IQGAP1P46940 1657 aa20.62■□□□□ 0.89
CACNA1E-208ENST00000533229 ADGRF5Q8IZF2 1346 aa20.61■□□□□ 0.89
CACNA1E-208ENST00000533229 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
CACNA1E-208ENST00000533229 CD109Q6YHK3 1445 aa20.6■□□□□ 0.89
CACNA1E-208ENST00000533229 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.89
CACNA1E-208ENST00000533229 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
CACNA1E-208ENST00000533229 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
CACNA1E-208ENST00000533229 POGZQ7Z3K3 1410 aa20.56■□□□□ 0.88
CACNA1E-208ENST00000533229 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms