RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 PTPREP23469 700 aa16.1■□□□□ 0.17
PKHD1L1-203ENST00000533183 CDAN1Q8IWY9 1227 aa16.1■□□□□ 0.17
PKHD1L1-203ENST00000533183 TSR1Q2NL82 804 aaKnown RBP16.08■□□□□ 0.16
PKHD1L1-203ENST00000533183 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.16
PKHD1L1-203ENST00000533183 KCNK17Q96T54 332 aa16.08■□□□□ 0.16
PKHD1L1-203ENST00000533183 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
PKHD1L1-203ENST00000533183 PSEN2P49810 448 aa16.06■□□□□ 0.16
PKHD1L1-203ENST00000533183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.06■□□□□ 0.16
PKHD1L1-203ENST00000533183 KCNH8Q96L42 1107 aa16.06■□□□□ 0.16
PKHD1L1-203ENST00000533183 KRTAP3-3Q9BYR6 98 aa16.03■□□□□ 0.16
PKHD1L1-203ENST00000533183 KRTAP3-2Q9BYR7 98 aa16.03■□□□□ 0.16
PKHD1L1-203ENST00000533183 PPP1R3GB7ZBB8 358 aa16.02■□□□□ 0.16
PKHD1L1-203ENST00000533183 CDHR5Q9HBB8 845 aa16.02■□□□□ 0.16
PKHD1L1-203ENST00000533183 COL9A1P20849 921 aa16.01■□□□□ 0.15
PKHD1L1-203ENST00000533183 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
PKHD1L1-203ENST00000533183 NUTM2FA1L443 756 aa16■□□□□ 0.15
PKHD1L1-203ENST00000533183 LMOD2Q6P5Q4 547 aa16■□□□□ 0.15
PKHD1L1-203ENST00000533183 DMRTA1Q5VZB9 504 aa15.99■□□□□ 0.15
PKHD1L1-203ENST00000533183 LSM11P83369 360 aaKnown RBP eCLIP15.98■□□□□ 0.15
PKHD1L1-203ENST00000533183 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
PKHD1L1-203ENST00000533183 NPDC1Q9NQX5 325 aaPredicted RBP15.97■□□□□ 0.15
PKHD1L1-203ENST00000533183 PTGDRQ13258 359 aa15.94■□□□□ 0.14
PKHD1L1-203ENST00000533183 GPIHBP1Q8IV16 184 aa15.94■□□□□ 0.14
PKHD1L1-203ENST00000533183 ZBED2Q9BTP6 218 aa15.94■□□□□ 0.14
PKHD1L1-203ENST00000533183 SLC4A5Q9BY07 1137 aa15.93■□□□□ 0.14
PKHD1L1-203ENST00000533183 FCHSD2O94868 740 aa15.91■□□□□ 0.14
PKHD1L1-203ENST00000533183 TK2O00142 265 aa15.9■□□□□ 0.14
PKHD1L1-203ENST00000533183 GPR37O15354 613 aa15.9■□□□□ 0.14
PKHD1L1-203ENST00000533183 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
PKHD1L1-203ENST00000533183 VPS9D1Q9Y2B5 631 aa15.89■□□□□ 0.13
PKHD1L1-203ENST00000533183 PRSS12P56730 875 aa15.88■□□□□ 0.13
PKHD1L1-203ENST00000533183 PROX2Q3B8N5 592 aa15.88■□□□□ 0.13
PKHD1L1-203ENST00000533183 ADGRD1Q6QNK2 874 aa15.87■□□□□ 0.13
PKHD1L1-203ENST00000533183 CDCA7LQ96GN5 454 aa15.87■□□□□ 0.13
PKHD1L1-203ENST00000533183 HIC1Q14526 733 aa15.86■□□□□ 0.13
PKHD1L1-203ENST00000533183 RBM27Q9P2N5 1060 aaKnown RBP15.86■□□□□ 0.13
PKHD1L1-203ENST00000533183 TRIM6-TRIM34B2RNG4 842 aa15.85■□□□□ 0.13
PKHD1L1-203ENST00000533183 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
PKHD1L1-203ENST00000533183 TSKSQ9UJT2 592 aa15.83■□□□□ 0.12
PKHD1L1-203ENST00000533183 TTC13Q8NBP0 860 aa15.82■□□□□ 0.12
PKHD1L1-203ENST00000533183 GNPATO15228 680 aa15.81■□□□□ 0.12
PKHD1L1-203ENST00000533183 PADI6Q6TGC4 694 aa15.81■□□□□ 0.12
PKHD1L1-203ENST00000533183 FAM198AQ9UFP1 575 aa15.81■□□□□ 0.12
PKHD1L1-203ENST00000533183 ZC3H15Q8WU90 426 aaKnown RBP15.8■□□□□ 0.12
PKHD1L1-203ENST00000533183 RABGEF1Q9UJ41 708 aa15.8■□□□□ 0.12
PKHD1L1-203ENST00000533183 HRO43593 1189 aa15.79■□□□□ 0.12
PKHD1L1-203ENST00000533183 KIAA1468Q9P260 1216 aa15.79■□□□□ 0.12
PKHD1L1-203ENST00000533183 PACS2Q86VP3 889 aa15.78■□□□□ 0.12
PKHD1L1-203ENST00000533183 BHMG1C9JSJ3 638 aaPredicted RBP15.76■□□□□ 0.11
PKHD1L1-203ENST00000533183 FECHP22830 423 aa15.76■□□□□ 0.11
PKHD1L1-203ENST00000533183 ZMYND10O75800 440 aa15.73■□□□□ 0.11
PKHD1L1-203ENST00000533183 NBPF3Q9H094 633 aa15.73■□□□□ 0.11
PKHD1L1-203ENST00000533183 NBPF26B4DH59 902 aa15.7■□□□□ 0.1
PKHD1L1-203ENST00000533183 C3orf80F5H4A9 247 aa15.7■□□□□ 0.1
PKHD1L1-203ENST00000533183 BARGINQ6ZT62 677 aa15.7■□□□□ 0.1
PKHD1L1-203ENST00000533183 TATDN2Q93075 761 aa15.7■□□□□ 0.1
PKHD1L1-203ENST00000533183 SPNS2Q8IVW8 549 aa15.69■□□□□ 0.1
PKHD1L1-203ENST00000533183 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
PKHD1L1-203ENST00000533183 PNMA3Q9UL41 463 aa15.69■□□□□ 0.1
PKHD1L1-203ENST00000533183 NUDT18Q6ZVK8 323 aa15.68■□□□□ 0.1
PKHD1L1-203ENST00000533183 ADGRG1Q9Y653 693 aa15.68■□□□□ 0.1
PKHD1L1-203ENST00000533183 MAP2K5Q13163 448 aa15.67■□□□□ 0.1
PKHD1L1-203ENST00000533183 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
PKHD1L1-203ENST00000533183 SEPT9Q9UHD8 586 aaPredicted RBP15.67■□□□□ 0.1
PKHD1L1-203ENST00000533183 SMAPO00193 183 aa15.66■□□□□ 0.1
PKHD1L1-203ENST00000533183 LAPTM4BQ86VI4 370 aa15.66■□□□□ 0.1
PKHD1L1-203ENST00000533183 FAM161AQ3B820 660 aa15.65■□□□□ 0.1
PKHD1L1-203ENST00000533183 MINK1Q8N4C8 1332 aaPredicted RBP15.65■□□□□ 0.1
PKHD1L1-203ENST00000533183 EYA1Q99502 592 aa15.63■□□□□ 0.09
PKHD1L1-203ENST00000533183 IRF6O14896 467 aa15.62■□□□□ 0.09
PKHD1L1-203ENST00000533183 OATP04181 439 aa15.62■□□□□ 0.09
PKHD1L1-203ENST00000533183 FAM98CQ17RN3 349 aaKnown RBP15.62■□□□□ 0.09
PKHD1L1-203ENST00000533183 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
PKHD1L1-203ENST00000533183 KRI1Q8N9T8 703 aaKnown RBP15.61■□□□□ 0.09
PKHD1L1-203ENST00000533183 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
PKHD1L1-203ENST00000533183 PXYLP1Q8TE99 480 aa15.59■□□□□ 0.09
PKHD1L1-203ENST00000533183 METTL3Q86U44 580 aaKnown RBP15.58■□□□□ 0.08
PKHD1L1-203ENST00000533183 GOLGA8CPA6NN73 597 aa15.57■□□□□ 0.08
PKHD1L1-203ENST00000533183 CCDC102AQ96A19 550 aa15.57■□□□□ 0.08
PKHD1L1-203ENST00000533183 ZFRQ96KR1 1074 aaKnown RBP15.57■□□□□ 0.08
PKHD1L1-203ENST00000533183 TPRNQ4KMQ1 711 aa15.56■□□□□ 0.08
PKHD1L1-203ENST00000533183 RCCD1A6NED2 376 aa15.52■□□□□ 0.08
PKHD1L1-203ENST00000533183 DNAJB2P25686 324 aa15.52■□□□□ 0.08
PKHD1L1-203ENST00000533183 MMRN1Q13201 1228 aa15.52■□□□□ 0.08
PKHD1L1-203ENST00000533183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.51■□□□□ 0.07
PKHD1L1-203ENST00000533183 ANKK1Q8NFD2 765 aa15.51■□□□□ 0.07
PKHD1L1-203ENST00000533183 WNT2BQ93097 391 aa15.51■□□□□ 0.07
PKHD1L1-203ENST00000533183 PHOX2BQ99453 314 aa15.51■□□□□ 0.07
PKHD1L1-203ENST00000533183 SLC24A3Q9HC58 644 aa15.51■□□□□ 0.07
PKHD1L1-203ENST00000533183 RNF166Q96A37 237 aaPredicted RBP15.49■□□□□ 0.07
PKHD1L1-203ENST00000533183 KCTD12Q96CX2 325 aaKnown RBP15.49■□□□□ 0.07
PKHD1L1-203ENST00000533183 AK7Q96M32 723 aa15.49■□□□□ 0.07
PKHD1L1-203ENST00000533183 TMEM134Q9H6X4 195 aa15.48■□□□□ 0.07
PKHD1L1-203ENST00000533183 HDGFP51858 240 aaKnown RBP15.47■□□□□ 0.07
PKHD1L1-203ENST00000533183 SAMD7Q7Z3H4 446 aa15.47■□□□□ 0.07
PKHD1L1-203ENST00000533183 SWT1Q5T5J6 900 aaKnown RBP15.45■□□□□ 0.06
PKHD1L1-203ENST00000533183 LRCH3Q96II8 777 aa15.45■□□□□ 0.06
PKHD1L1-203ENST00000533183 SOWAHBA6NEL2 793 aa15.44■□□□□ 0.06
PKHD1L1-203ENST00000533183 THSD4Q6ZMP0 1018 aa15.44■□□□□ 0.06
PKHD1L1-203ENST00000533183 NLRP7Q8WX94 980 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms