RNA–Protein interactions for RNA: ENST00000533119.1

SCP2-216, Transcript of sterol carrier protein 2, humanhuman

TSL 5

Gene SCP2, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-216ENST00000533119 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
SCP2-216ENST00000533119 HRO43593 1189 aa11.99□□□□□ -0.49
SCP2-216ENST00000533119 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
SCP2-216ENST00000533119 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
SCP2-216ENST00000533119 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
SCP2-216ENST00000533119 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
SCP2-216ENST00000533119 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
SCP2-216ENST00000533119 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
SCP2-216ENST00000533119 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
SCP2-216ENST00000533119 C6orf132Q5T0Z8 1188 aa11.91□□□□□ -0.5
SCP2-216ENST00000533119 LAPTM4BQ86VI4 370 aa11.91□□□□□ -0.5
SCP2-216ENST00000533119 NBR1Q14596 966 aa11.9□□□□□ -0.5
SCP2-216ENST00000533119 DDX12PQ92771 950 aa11.9□□□□□ -0.5
SCP2-216ENST00000533119 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
SCP2-216ENST00000533119 MAP3K7O43318 606 aa11.89□□□□□ -0.51
SCP2-216ENST00000533119 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
SCP2-216ENST00000533119 BHMG1C9JSJ3 638 aaPredicted RBP11.87□□□□□ -0.51
SCP2-216ENST00000533119 KCTD12Q96CX2 325 aaKnown RBP11.87□□□□□ -0.51
SCP2-216ENST00000533119 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
SCP2-216ENST00000533119 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
SCP2-216ENST00000533119 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
SCP2-216ENST00000533119 ANKK1Q8NFD2 765 aa11.84□□□□□ -0.51
SCP2-216ENST00000533119 WNT2BQ93097 391 aa11.84□□□□□ -0.51
SCP2-216ENST00000533119 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
SCP2-216ENST00000533119 GRXCR2A6NFK2 248 aa11.81□□□□□ -0.52
SCP2-216ENST00000533119 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
SCP2-216ENST00000533119 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
SCP2-216ENST00000533119 COL9A1P20849 921 aa11.79□□□□□ -0.52
SCP2-216ENST00000533119 THSD4Q6ZMP0 1018 aa11.78□□□□□ -0.52
SCP2-216ENST00000533119 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
SCP2-216ENST00000533119 RBM27Q9P2N5 1060 aaKnown RBP11.78□□□□□ -0.52
SCP2-216ENST00000533119 FAM98CQ17RN3 349 aaKnown RBP11.77□□□□□ -0.53
SCP2-216ENST00000533119 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
SCP2-216ENST00000533119 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
SCP2-216ENST00000533119 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SCP2-216ENST00000533119 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
SCP2-216ENST00000533119 PTPN5P54829 565 aa11.74□□□□□ -0.53
SCP2-216ENST00000533119 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
SCP2-216ENST00000533119 SLC4A3P48751 1232 aa11.73□□□□□ -0.53
SCP2-216ENST00000533119 PRSS12P56730 875 aa11.73□□□□□ -0.53
SCP2-216ENST00000533119 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
SCP2-216ENST00000533119 OSBPP22059 807 aa11.71□□□□□ -0.53
SCP2-216ENST00000533119 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
SCP2-216ENST00000533119 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
SCP2-216ENST00000533119 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
SCP2-216ENST00000533119 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
SCP2-216ENST00000533119 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
SCP2-216ENST00000533119 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
SCP2-216ENST00000533119 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
SCP2-216ENST00000533119 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.68□□□□□ -0.54
SCP2-216ENST00000533119 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
SCP2-216ENST00000533119 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
SCP2-216ENST00000533119 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
SCP2-216ENST00000533119 TSKSQ9UJT2 592 aa11.63□□□□□ -0.55
SCP2-216ENST00000533119 RGS20O76081 388 aa11.61□□□□□ -0.55
SCP2-216ENST00000533119 TATDN2Q93075 761 aa11.61□□□□□ -0.55
SCP2-216ENST00000533119 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
SCP2-216ENST00000533119 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
SCP2-216ENST00000533119 PPP4CP60510 307 aa11.59□□□□□ -0.55
SCP2-216ENST00000533119 BCAMP50895 628 aa11.58□□□□□ -0.56
SCP2-216ENST00000533119 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
SCP2-216ENST00000533119 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
SCP2-216ENST00000533119 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
SCP2-216ENST00000533119 FCHSD2O94868 740 aa11.55□□□□□ -0.56
SCP2-216ENST00000533119 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
SCP2-216ENST00000533119 SLF2Q8IX21 1173 aa11.55□□□□□ -0.56
SCP2-216ENST00000533119 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
SCP2-216ENST00000533119 PRR14Q9BWN1 585 aa11.55□□□□□ -0.56
SCP2-216ENST00000533119 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
SCP2-216ENST00000533119 MLLT3P42568 568 aaPredicted RBP11.54□□□□□ -0.56
SCP2-216ENST00000533119 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
SCP2-216ENST00000533119 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
SCP2-216ENST00000533119 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
SCP2-216ENST00000533119 KCNC4Q03721 635 aa11.52□□□□□ -0.57
SCP2-216ENST00000533119 PTGDRQ13258 359 aa11.52□□□□□ -0.57
SCP2-216ENST00000533119 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
SCP2-216ENST00000533119 SAMD7Q7Z3H4 446 aa11.52□□□□□ -0.57
SCP2-216ENST00000533119 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
SCP2-216ENST00000533119 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
SCP2-216ENST00000533119 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
SCP2-216ENST00000533119 SEMA3EO15041 775 aa11.49□□□□□ -0.57
SCP2-216ENST00000533119 SMAPO00193 183 aa11.48□□□□□ -0.57
SCP2-216ENST00000533119 OATP04181 439 aa11.48□□□□□ -0.57
SCP2-216ENST00000533119 HIC1Q14526 733 aa11.48□□□□□ -0.57
SCP2-216ENST00000533119 DNAJB2P25686 324 aa11.47□□□□□ -0.57
SCP2-216ENST00000533119 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
SCP2-216ENST00000533119 FAM198AQ9UFP1 575 aa11.47□□□□□ -0.57
SCP2-216ENST00000533119 A0A0G2JS52 829 aa11.46□□□□□ -0.57
SCP2-216ENST00000533119 RNF40O75150 1001 aa11.46□□□□□ -0.57
SCP2-216ENST00000533119 EYA1Q99502 592 aa11.43□□□□□ -0.58
SCP2-216ENST00000533119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
SCP2-216ENST00000533119 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
SCP2-216ENST00000533119 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
SCP2-216ENST00000533119 ADGRG1Q9Y653 693 aa11.39□□□□□ -0.59
SCP2-216ENST00000533119 GNPATO15228 680 aa11.38□□□□□ -0.59
SCP2-216ENST00000533119 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
SCP2-216ENST00000533119 GGCXP38435 758 aa11.37□□□□□ -0.59
SCP2-216ENST00000533119 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
SCP2-216ENST00000533119 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
SCP2-216ENST00000533119 KDM2AQ9Y2K7 1162 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms