RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 LRP6O75581 1613 aa3.48□□□□□ -1.85
KNL1-211ENST00000533001 TROQ12816 1431 aaPredicted RBP3.48□□□□□ -1.85
KNL1-211ENST00000533001 GOLGA3Q08378 1498 aa3.48□□□□□ -1.85
KNL1-211ENST00000533001 CERKQ8TCT0 537 aa3.48□□□□□ -1.85
KNL1-211ENST00000533001 C9orf84Q5VXU9 1444 aa3.48□□□□□ -1.85
KNL1-211ENST00000533001 SYCP2Q9BX26 1530 aa3.47□□□□□ -1.85
KNL1-211ENST00000533001 CEBPAP49715 358 aaPredicted RBP3.47□□□□□ -1.85
KNL1-211ENST00000533001 PRDM15P57071 1507 aaPredicted RBP3.47□□□□□ -1.85
KNL1-211ENST00000533001 TRIOO75962 3097 aa3.47□□□□□ -1.85
KNL1-211ENST00000533001 SCAPERQ9BY12 1400 aa3.47□□□□□ -1.85
KNL1-211ENST00000533001 AFAP1Q8N556 730 aa3.47□□□□□ -1.85
KNL1-211ENST00000533001 XIRP2A4UGR9 3374 aa3.47□□□□□ -1.85
KNL1-211ENST00000533001 PRAG1Q86YV5 1406 aa3.46□□□□□ -1.86
KNL1-211ENST00000533001 KIAA1107Q9UPP5 1409 aa3.46□□□□□ -1.86
KNL1-211ENST00000533001 FAM135AQ9P2D6 1515 aa3.46□□□□□ -1.86
KNL1-211ENST00000533001 ATP7AQ04656 1500 aa3.46□□□□□ -1.86
KNL1-211ENST00000533001 UGGT1Q9NYU2 1555 aa3.46□□□□□ -1.86
KNL1-211ENST00000533001 UNC13BO14795 1591 aa3.46□□□□□ -1.86
KNL1-211ENST00000533001 CRYBG1Q9Y4K1 1723 aa3.45□□□□□ -1.86
KNL1-211ENST00000533001 XRN1Q8IZH2 1706 aaKnown RBP3.45□□□□□ -1.86
KNL1-211ENST00000533001 PZPP20742 1482 aa3.45□□□□□ -1.86
KNL1-211ENST00000533001 ZNF335Q9H4Z2 1342 aaPredicted RBP3.45□□□□□ -1.86
KNL1-211ENST00000533001 ABCC3O15438 1527 aa3.45□□□□□ -1.86
KNL1-211ENST00000533001 CROCC2H7BZ55 1655 aa3.45□□□□□ -1.86
KNL1-211ENST00000533001 IQGAP1P46940 1657 aa3.45□□□□□ -1.86
KNL1-211ENST00000533001 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 TMEM131LA2VDJ0 1609 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 A2ML1A8K2U0 1454 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 NHSL1Q5SYE7 1610 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 CEP152O94986 1710 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 CFAP65Q6ZU64 1925 aaKnown RBP3.44□□□□□ -1.86
KNL1-211ENST00000533001 BCL9LQ86UU0 1499 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 LMTK2Q8IWU2 1503 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 ARHGEF5Q12774 1597 aa3.44□□□□□ -1.86
KNL1-211ENST00000533001 CASKIN1Q8WXD9 1431 aa3.43□□□□□ -1.86
KNL1-211ENST00000533001 ARHGAP31Q2M1Z3 1444 aa3.43□□□□□ -1.86
KNL1-211ENST00000533001 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
KNL1-211ENST00000533001 EIF2AK4Q9P2K8 1649 aaKnown RBP3.43□□□□□ -1.86
KNL1-211ENST00000533001 COL24A1Q17RW2 1714 aa3.43□□□□□ -1.86
KNL1-211ENST00000533001 NOS1P29475 1434 aa3.43□□□□□ -1.86
KNL1-211ENST00000533001 SHANK2Q9UPX8 1470 aa3.43□□□□□ -1.86
KNL1-211ENST00000533001 ZMYM3Q14202 1370 aa3.42□□□□□ -1.86
KNL1-211ENST00000533001 SHPRHQ149N8 1683 aa3.42□□□□□ -1.86
KNL1-211ENST00000533001 ROBO1Q9Y6N7 1651 aa3.42□□□□□ -1.86
KNL1-211ENST00000533001 DNAH14Q0VDD8 3507 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 VPS13AQ96RL7 3174 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 RTEL1-TNFRSF6BF6WH68 1400 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 ADAMTS13Q76LX8 1427 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 AHDC1Q5TGY3 1603 aaPredicted RBP3.41□□□□□ -1.86
KNL1-211ENST00000533001 ZNF644Q9H582 1327 aaPredicted RBP3.41□□□□□ -1.86
KNL1-211ENST00000533001 BRWD3Q6RI45 1802 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 A2MP01023 1474 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 CPS1P31327 1500 aa3.41□□□□□ -1.86
KNL1-211ENST00000533001 KRTAP17-1Q9BYP8 105 aa3.4□□□□□ -1.86
KNL1-211ENST00000533001 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.4□□□□□ -1.86
KNL1-211ENST00000533001 ERVK-7P63135 1459 aa3.4□□□□□ -1.87
KNL1-211ENST00000533001 KIF1AQ12756 1690 aa3.4□□□□□ -1.87
KNL1-211ENST00000533001 FYCO1Q9BQS8 1478 aa3.4□□□□□ -1.87
KNL1-211ENST00000533001 CEP162Q5TB80 1403 aa3.4□□□□□ -1.87
KNL1-211ENST00000533001 COL22A1Q8NFW1 1626 aaPredicted RBP3.4□□□□□ -1.87
KNL1-211ENST00000533001 FRYLO94915 3013 aa3.4□□□□□ -1.87
KNL1-211ENST00000533001 NALCNQ8IZF0 1738 aa3.4□□□□□ -1.87
KNL1-211ENST00000533001 ABCA3Q99758 1704 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 SCAF11Q99590 1463 aaKnown RBP3.39□□□□□ -1.87
KNL1-211ENST00000533001 DMDP11532 3685 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 SPHKAPQ2M3C7 1700 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 MARF1Q9Y4F3 1742 aaKnown RBP3.39□□□□□ -1.87
KNL1-211ENST00000533001 FAM135BQ49AJ0 1406 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 PTPRUQ92729 1446 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 LTKP29376 864 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 ASXL1Q8IXJ9 1541 aa3.39□□□□□ -1.87
KNL1-211ENST00000533001 POTEAQ6S8J7 498 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 EEA1Q15075 1411 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 E9PCH4 1651 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 IFT172Q9UG01 1749 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 CSRNP3Q8WYN3 585 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 QRICH2Q9H0J4 1663 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 DCHS1Q96JQ0 3298 aa3.38□□□□□ -1.87
KNL1-211ENST00000533001 UHRF1BP1Q6BDS2 1440 aa3.37□□□□□ -1.87
KNL1-211ENST00000533001 MIA2Q96PC5 1412 aa3.37□□□□□ -1.87
KNL1-211ENST00000533001 WDFY3Q8IZQ1 3526 aa3.37□□□□□ -1.87
KNL1-211ENST00000533001 DHX29Q7Z478 1369 aaKnown RBP3.37□□□□□ -1.87
KNL1-211ENST00000533001 HSPA1LP34931 641 aa3.37□□□□□ -1.87
KNL1-211ENST00000533001 SUPT5HO00267 1087 aaKnown RBP3.37□□□□□ -1.87
KNL1-211ENST00000533001 TNS1Q9HBL0 1735 aaKnown RBP3.37□□□□□ -1.87
KNL1-211ENST00000533001 SETBP1Q9Y6X0 1596 aa3.37□□□□□ -1.87
KNL1-211ENST00000533001 CHD7Q9P2D1 2997 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 USP32Q8NFA0 1604 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.36□□□□□ -1.87
KNL1-211ENST00000533001 CNTLNQ9NXG0 1405 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 FOXD1Q16676 465 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 FBXO31Q5XUX0 539 aaPredicted RBP3.36□□□□□ -1.87
KNL1-211ENST00000533001 NLRP1Q9C000 1473 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 KCNH8Q96L42 1107 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 GLI3P10071 1580 aa3.36□□□□□ -1.87
KNL1-211ENST00000533001 IQGAP3Q86VI3 1631 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 NRAPQ86VF7 1730 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 POTEDQ86YR6 584 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 MYO15AQ9UKN7 3530 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 PLEKHH2Q8IVE3 1493 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms