RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 PDE3BQ13370 1112 aa10.15□□□□□ -0.78
CTNND1-234ENST00000532844 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.79
CTNND1-234ENST00000532844 CENPJQ9HC77 1338 aaPredicted RBP10.15□□□□□ -0.79
CTNND1-234ENST00000532844 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
CTNND1-234ENST00000532844 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-234ENST00000532844 APPP05067 770 aa10.14□□□□□ -0.79
CTNND1-234ENST00000532844 CLUAP1Q96AJ1 413 aa10.13□□□□□ -0.79
CTNND1-234ENST00000532844 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
CTNND1-234ENST00000532844 TERF2IPQ9NYB0 399 aa10.13□□□□□ -0.79
CTNND1-234ENST00000532844 MEX3CQ5U5Q3 659 aaKnown RBP10.12□□□□□ -0.79
CTNND1-234ENST00000532844 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
CTNND1-234ENST00000532844 SPAG9O60271 1321 aaKnown RBP10.12□□□□□ -0.79
CTNND1-234ENST00000532844 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
CTNND1-234ENST00000532844 GNL2Q13823 731 aaKnown RBP10.11□□□□□ -0.79
CTNND1-234ENST00000532844 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
CTNND1-234ENST00000532844 CCDC144AA2RUR9 1427 aa10.11□□□□□ -0.79
CTNND1-234ENST00000532844 PANK3Q9H999 370 aa10.11□□□□□ -0.79
CTNND1-234ENST00000532844 STK31Q9BXU1 1019 aa10.11□□□□□ -0.79
CTNND1-234ENST00000532844 GOLGA6L3A6NEY3 463 aa10.1□□□□□ -0.79
CTNND1-234ENST00000532844 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 RRP7AQ9Y3A4 280 aaKnown RBP10.09□□□□□ -0.79
CTNND1-234ENST00000532844 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 WASHC2CQ9Y4E1 1318 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 CSB-PGBD3P0DP91 1061 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 TPM4P67936 248 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 PRKRIP1Q9H875 184 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-234ENST00000532844 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 USP47Q96K76 1375 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
CTNND1-234ENST00000532844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.09□□□□□ -0.792e-8■□□□□ 11.3
CTNND1-234ENST00000532844 SYAP1Q96A49 352 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-234ENST00000532844 PLIN1O60240 522 aa10.08□□□□□ -0.8
CTNND1-234ENST00000532844 HMMRO75330 724 aa10.08□□□□□ -0.8
CTNND1-234ENST00000532844 ZNF771Q7L3S4 317 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-234ENST00000532844 ZBED9Q6R2W3 1325 aa10.08□□□□□ -0.8
CTNND1-234ENST00000532844 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
CTNND1-234ENST00000532844 RRP1P56182 461 aaKnown RBP10.08□□□□□ -0.8
CTNND1-234ENST00000532844 RRP12Q5JTH9 1297 aaKnown RBP10.08□□□□□ -0.8
CTNND1-234ENST00000532844 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-234ENST00000532844 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
CTNND1-234ENST00000532844 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
CTNND1-234ENST00000532844 GPATCH3Q96I76 525 aa10.07□□□□□ -0.8
CTNND1-234ENST00000532844 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-234ENST00000532844 EXOC6Q8TAG9 804 aa10.07□□□□□ -0.8
CTNND1-234ENST00000532844 JPH4Q96JJ6 628 aa10.07□□□□□ -0.8
CTNND1-234ENST00000532844 NOL8Q76FK4 1167 aaKnown RBP10.06□□□□□ -0.8
CTNND1-234ENST00000532844 MSH5O43196 834 aa10.06□□□□□ -0.8
CTNND1-234ENST00000532844 HTATSF1O43719 755 aaKnown RBP10.06□□□□□ -0.8
CTNND1-234ENST00000532844 GPS2Q13227 327 aa10.06□□□□□ -0.8
CTNND1-234ENST00000532844 CRBNQ96SW2 442 aa10.06□□□□□ -0.8
CTNND1-234ENST00000532844 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
CTNND1-234ENST00000532844 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
CTNND1-234ENST00000532844 UACAQ9BZF9 1416 aa10.05□□□□□ -0.8
CTNND1-234ENST00000532844 HSP90B1P14625 803 aaKnown RBP10.05□□□□□ -0.8
CTNND1-234ENST00000532844 PDE4AP27815 886 aa10.05□□□□□ -0.8
CTNND1-234ENST00000532844 CHMP3Q9Y3E7 222 aa10.05□□□□□ -0.8
CTNND1-234ENST00000532844 TPM3P06753 285 aa10.05□□□□□ -0.8
CTNND1-234ENST00000532844 PDE4CQ08493 712 aa10.04□□□□□ -0.8
CTNND1-234ENST00000532844 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CTNND1-234ENST00000532844 BCL2L13Q9BXK5 485 aa10.04□□□□□ -0.8
CTNND1-234ENST00000532844 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
CTNND1-234ENST00000532844 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
CTNND1-234ENST00000532844 E9PSI1 815 aa10.04□□□□□ -0.8
CTNND1-234ENST00000532844 AMPHP49418 695 aa10.04□□□□□ -0.8
CTNND1-234ENST00000532844 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
CTNND1-234ENST00000532844 CEP89Q96ST8 783 aa10.03□□□□□ -0.8
CTNND1-234ENST00000532844 GORABQ5T7V8 394 aa10.03□□□□□ -0.8
CTNND1-234ENST00000532844 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
CTNND1-234ENST00000532844 ST18O60284 1047 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 CUX1P39880 1505 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 KIF21BO75037 1637 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 LTV1Q96GA3 475 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-234ENST00000532844 EID1Q9Y6B2 187 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 CGNL1Q0VF96 1302 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 FGD5Q6ZNL6 1462 aa10.02□□□□□ -0.81
CTNND1-234ENST00000532844 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-234ENST00000532844 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-234ENST00000532844 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 HDAC5Q9UQL6 1122 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 TAF7LQ5H9L4 462 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 NOM1Q5C9Z4 860 aaKnown RBP10.01□□□□□ -0.81
CTNND1-234ENST00000532844 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 TEX35Q5T0J7 233 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 ANKRD45Q5TZF3 282 aa10.01□□□□□ -0.81
CTNND1-234ENST00000532844 FGD6Q6ZV73 1430 aa10□□□□□ -0.81
CTNND1-234ENST00000532844 EVC2Q86UK5 1308 aa10□□□□□ -0.81
CTNND1-234ENST00000532844 ELL2O00472 640 aaPredicted RBP10□□□□□ -0.81
CTNND1-234ENST00000532844 COG6Q9Y2V7 657 aa10□□□□□ -0.81
CTNND1-234ENST00000532844 PTPRGP23470 1445 aa9.99□□□□□ -0.81
CTNND1-234ENST00000532844 APAF1O14727 1248 aa9.99□□□□□ -0.81
CTNND1-234ENST00000532844 MYOM3Q5VTT5 1437 aa9.99□□□□□ -0.81
CTNND1-234ENST00000532844 PRDM2Q13029 1718 aa9.99□□□□□ -0.81
CTNND1-234ENST00000532844 FANCIQ9NVI1 1328 aa9.99□□□□□ -0.81
CTNND1-234ENST00000532844 KIF16BQ96L93 1317 aa9.98□□□□□ -0.81
CTNND1-234ENST00000532844 IGF1RP08069 1367 aa9.98□□□□□ -0.81
CTNND1-234ENST00000532844 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
CTNND1-234ENST00000532844 COG3Q96JB2 828 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms