RNA–Protein interactions for RNA: ENST00000531696.5

KDM2A-213, Transcript of lysine demethylase 2A, humanhuman

TSL 5

Gene KDM2A, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-213ENST00000531696 CCDC94Q9BW85 323 aaPredicted RBP13.74□□□□□ -0.21
KDM2A-213ENST00000531696 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
KDM2A-213ENST00000531696 SMG6Q86US8 1419 aaKnown RBP13.74□□□□□ -0.21
KDM2A-213ENST00000531696 GTF2E1P29083 439 aaPredicted RBP13.74□□□□□ -0.21
KDM2A-213ENST00000531696 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
KDM2A-213ENST00000531696 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
KDM2A-213ENST00000531696 KIF3AQ9Y496 699 aa13.73□□□□□ -0.21
KDM2A-213ENST00000531696 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
KDM2A-213ENST00000531696 ZNF526Q8TF50 670 aaPredicted RBP13.73□□□□□ -0.21
KDM2A-213ENST00000531696 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
KDM2A-213ENST00000531696 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
KDM2A-213ENST00000531696 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 TRIM6-TRIM34B2RNG4 842 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 GPATCH11Q8N954 259 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
KDM2A-213ENST00000531696 KIF20AO95235 890 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
KDM2A-213ENST00000531696 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
KDM2A-213ENST00000531696 TNNT1P13805 278 aa13.71□□□□□ -0.21
KDM2A-213ENST00000531696 L3MBTL2Q969R5 705 aa13.71□□□□□ -0.21
KDM2A-213ENST00000531696 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
KDM2A-213ENST00000531696 NPHP1O15259 732 aa13.71□□□□□ -0.21
KDM2A-213ENST00000531696 TSC1Q92574 1164 aa13.71□□□□□ -0.21
KDM2A-213ENST00000531696 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.22
KDM2A-213ENST00000531696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
KDM2A-213ENST00000531696 ZBTB22O15209 634 aa13.7□□□□□ -0.22
KDM2A-213ENST00000531696 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
KDM2A-213ENST00000531696 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
KDM2A-213ENST00000531696 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
KDM2A-213ENST00000531696 C20orf194Q5TEA3 1177 aa13.68□□□□□ -0.22
KDM2A-213ENST00000531696 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
KDM2A-213ENST00000531696 TIGD1Q96MW7 591 aa13.68□□□□□ -0.22
KDM2A-213ENST00000531696 GOLGA6L1Q8N7Z2 621 aa13.67□□□□□ -0.22
KDM2A-213ENST00000531696 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
KDM2A-213ENST00000531696 DMTNQ08495 405 aa13.67□□□□□ -0.22
KDM2A-213ENST00000531696 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
KDM2A-213ENST00000531696 RWDD1Q9H446 243 aaPredicted RBP13.67□□□□□ -0.22
KDM2A-213ENST00000531696 PRDM4Q9UKN5 801 aa13.67□□□□□ -0.22
KDM2A-213ENST00000531696 BRD2P25440 801 aaKnown RBP13.66□□□□□ -0.22
KDM2A-213ENST00000531696 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
KDM2A-213ENST00000531696 NOL8Q76FK4 1167 aaKnown RBP13.65□□□□□ -0.22
KDM2A-213ENST00000531696 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
KDM2A-213ENST00000531696 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
KDM2A-213ENST00000531696 BCL2L13Q9BXK5 485 aa13.64□□□□□ -0.23
KDM2A-213ENST00000531696 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
KDM2A-213ENST00000531696 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
KDM2A-213ENST00000531696 PMFBP1Q8TBY8 1022 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 NBPF1Q3BBV0 1214 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
KDM2A-213ENST00000531696 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 CALCOCO1Q9P1Z2 691 aa13.63□□□□□ -0.23
KDM2A-213ENST00000531696 KIF7Q2M1P5 1343 aa13.62□□□□□ -0.23
KDM2A-213ENST00000531696 ZNF830Q96NB3 372 aaPredicted RBP13.62□□□□□ -0.23
KDM2A-213ENST00000531696 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
KDM2A-213ENST00000531696 C8orf34Q49A92 452 aa13.61□□□□□ -0.23
KDM2A-213ENST00000531696 TEX35Q5T0J7 233 aa13.61□□□□□ -0.23
KDM2A-213ENST00000531696 RALBP1Q15311 655 aa13.61□□□□□ -0.23
KDM2A-213ENST00000531696 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
KDM2A-213ENST00000531696 NACADO15069 1562 aa13.6□□□□□ -0.23
KDM2A-213ENST00000531696 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
KDM2A-213ENST00000531696 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
KDM2A-213ENST00000531696 RIPK4P57078 832 aa13.6□□□□□ -0.23
KDM2A-213ENST00000531696 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
KDM2A-213ENST00000531696 GTF2F1P35269 517 aaKnown RBP eCLIP13.59□□□□□ -0.23
KDM2A-213ENST00000531696 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
KDM2A-213ENST00000531696 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.232e-7■■□□□ 13.8
KDM2A-213ENST00000531696 SPC24Q8NBT2 197 aa13.58□□□□□ -0.23
KDM2A-213ENST00000531696 PANK1Q8TE04 598 aa13.58□□□□□ -0.23
KDM2A-213ENST00000531696 KNSTRNQ9Y448 316 aa13.58□□□□□ -0.23
KDM2A-213ENST00000531696 ZNF777Q9ULD5 760 aaPredicted RBP13.58□□□□□ -0.24
KDM2A-213ENST00000531696 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.24
KDM2A-213ENST00000531696 SKIDA1Q1XH10 827 aa13.58□□□□□ -0.24
KDM2A-213ENST00000531696 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
KDM2A-213ENST00000531696 GPS2Q13227 327 aa13.57□□□□□ -0.24
KDM2A-213ENST00000531696 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
KDM2A-213ENST00000531696 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
KDM2A-213ENST00000531696 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
KDM2A-213ENST00000531696 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
KDM2A-213ENST00000531696 SEC24BO95487 1268 aa13.56□□□□□ -0.24
KDM2A-213ENST00000531696 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
KDM2A-213ENST00000531696 SYCE3A1L190 88 aa13.56□□□□□ -0.24
KDM2A-213ENST00000531696 APBB1O00213 710 aa13.55□□□□□ -0.24
KDM2A-213ENST00000531696 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
KDM2A-213ENST00000531696 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
KDM2A-213ENST00000531696 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
KDM2A-213ENST00000531696 PHF14O94880 888 aa13.54□□□□□ -0.24
KDM2A-213ENST00000531696 NOM1Q5C9Z4 860 aaKnown RBP13.54□□□□□ -0.24
KDM2A-213ENST00000531696 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
KDM2A-213ENST00000531696 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
KDM2A-213ENST00000531696 CGNL1Q0VF96 1302 aa13.53□□□□□ -0.24
KDM2A-213ENST00000531696 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
KDM2A-213ENST00000531696 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms