RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 NEURL4Q96JN8 1562 aa10.69□□□□□ -0.7
PACS1-211ENST00000531298 HNRNPMP52272 730 aaKnown RBP eCLIP10.68□□□□□ -0.7
PACS1-211ENST00000531298 STAC3Q96MF2 364 aa10.68□□□□□ -0.7
PACS1-211ENST00000531298 DEPDC5O75140 1603 aa10.68□□□□□ -0.7
PACS1-211ENST00000531298 INO80Q9ULG1 1556 aaPredicted RBP10.68□□□□□ -0.7
PACS1-211ENST00000531298 ARID4BQ4LE39 1312 aaPredicted RBP10.67□□□□□ -0.7
PACS1-211ENST00000531298 ZFYVE16Q7Z3T8 1539 aa10.67□□□□□ -0.7
PACS1-211ENST00000531298 ASXL2Q76L83 1435 aa10.67□□□□□ -0.7
PACS1-211ENST00000531298 MIER1Q8N108 512 aa10.66□□□□□ -0.7
PACS1-211ENST00000531298 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
PACS1-211ENST00000531298 FANCAO15360 1455 aa10.66□□□□□ -0.7
PACS1-211ENST00000531298 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
PACS1-211ENST00000531298 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.7
PACS1-211ENST00000531298 PKD2Q13563 968 aa10.65□□□□□ -0.7
PACS1-211ENST00000531298 U3KPZ7 1027 aaPredicted RBP10.65□□□□□ -0.7
PACS1-211ENST00000531298 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.7
PACS1-211ENST00000531298 VWDEQ8N2E2 1590 aa10.65□□□□□ -0.71
PACS1-211ENST00000531298 BCORL1Q5H9F3 1711 aa10.64□□□□□ -0.71
PACS1-211ENST00000531298 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
PACS1-211ENST00000531298 RALGAPBQ86X10 1494 aa10.63□□□□□ -0.71
PACS1-211ENST00000531298 NEO1Q92859 1461 aa10.63□□□□□ -0.71
PACS1-211ENST00000531298 LAMC1P11047 1609 aa10.63□□□□□ -0.71
PACS1-211ENST00000531298 GLI2P10070 1586 aa10.63□□□□□ -0.71
PACS1-211ENST00000531298 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
PACS1-211ENST00000531298 ZNF518AQ6AHZ1 1483 aa10.62□□□□□ -0.71
PACS1-211ENST00000531298 KDM5CP41229 1560 aa10.62□□□□□ -0.71
PACS1-211ENST00000531298 TRAPPC8Q9Y2L5 1435 aa10.62□□□□□ -0.71
PACS1-211ENST00000531298 ADGRL1O94910 1474 aa10.61□□□□□ -0.71
PACS1-211ENST00000531298 MLH3Q9UHC1 1453 aa10.61□□□□□ -0.71
PACS1-211ENST00000531298 SPAG9O60271 1321 aaKnown RBP10.61□□□□□ -0.71
PACS1-211ENST00000531298 TET3O43151 1660 aa10.61□□□□□ -0.71
PACS1-211ENST00000531298 PRDM15P57071 1507 aaPredicted RBP10.6□□□□□ -0.71
PACS1-211ENST00000531298 LMTK2Q8IWU2 1503 aa10.6□□□□□ -0.71
PACS1-211ENST00000531298 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
PACS1-211ENST00000531298 DHX29Q7Z478 1369 aaKnown RBP10.6□□□□□ -0.71
PACS1-211ENST00000531298 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
PACS1-211ENST00000531298 PTPRTO14522 1441 aa10.59□□□□□ -0.71
PACS1-211ENST00000531298 RNF17Q9BXT8 1623 aaKnown RBP10.58□□□□□ -0.72
PACS1-211ENST00000531298 GPRASP1Q5JY77 1395 aa10.58□□□□□ -0.72
PACS1-211ENST00000531298 TRPM2O94759 1503 aa10.58□□□□□ -0.72
PACS1-211ENST00000531298 SCAPERQ9BY12 1400 aa10.58□□□□□ -0.72
PACS1-211ENST00000531298 PLA2R1Q13018 1463 aa10.57□□□□□ -0.72
PACS1-211ENST00000531298 ROCK2O75116 1388 aaKnown RBP10.57□□□□□ -0.72
PACS1-211ENST00000531298 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
PACS1-211ENST00000531298 CD109Q6YHK3 1445 aa10.57□□□□□ -0.72
PACS1-211ENST00000531298 KIDINS220Q9ULH0 1771 aa10.57□□□□□ -0.72
PACS1-211ENST00000531298 KANK1Q14678 1352 aa10.56□□□□□ -0.72
PACS1-211ENST00000531298 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
PACS1-211ENST00000531298 POGZQ7Z3K3 1410 aa10.56□□□□□ -0.72
PACS1-211ENST00000531298 MAP3K4Q9Y6R4 1608 aa10.55□□□□□ -0.72
PACS1-211ENST00000531298 ANP32CO43423 234 aa10.55□□□□□ -0.72
PACS1-211ENST00000531298 NBPF8Q3BBV2 869 aa10.55□□□□□ -0.72
PACS1-211ENST00000531298 SPHKAPQ2M3C7 1700 aa10.55□□□□□ -0.72
PACS1-211ENST00000531298 CCDC7Q96M83 1385 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 E9PCH4 1651 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 CEP152O94986 1710 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 PRAG1Q86YV5 1406 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 CNTLNQ9NXG0 1405 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 HECW2Q9P2P5 1572 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 TRPM1Q7Z4N2 1603 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 MROH1Q8NDA8 1641 aa10.54□□□□□ -0.72
PACS1-211ENST00000531298 KIAA1210Q9ULL0 1709 aa10.53□□□□□ -0.72
PACS1-211ENST00000531298 DDX10Q13206 875 aaKnown RBP10.53□□□□□ -0.72
PACS1-211ENST00000531298 WASHC2AQ641Q2 1341 aa10.53□□□□□ -0.72
PACS1-211ENST00000531298 A2MP01023 1474 aa10.52□□□□□ -0.73
PACS1-211ENST00000531298 ZBTB22O15209 634 aa10.51□□□□□ -0.73
PACS1-211ENST00000531298 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
PACS1-211ENST00000531298 AFAP1Q8N556 730 aa10.51□□□□□ -0.73
PACS1-211ENST00000531298 EFCAB6Q5THR3 1501 aa10.51□□□□□ -0.73
PACS1-211ENST00000531298 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
PACS1-211ENST00000531298 USP47Q96K76 1375 aa10.51□□□□□ -0.73
PACS1-211ENST00000531298 ZMYM4Q5VZL5 1548 aa10.5□□□□□ -0.73
PACS1-211ENST00000531298 REREQ9P2R6 1566 aa10.5□□□□□ -0.73
PACS1-211ENST00000531298 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
PACS1-211ENST00000531298 RICTORQ6R327 1708 aa10.49□□□□□ -0.73
PACS1-211ENST00000531298 ARHGAP31Q2M1Z3 1444 aa10.48□□□□□ -0.73
PACS1-211ENST00000531298 MYOM2P54296 1465 aa10.48□□□□□ -0.73
PACS1-211ENST00000531298 RIMBP3CA6NJZ7 1639 aa10.47□□□□□ -0.73
PACS1-211ENST00000531298 RIMBP3BA6NNM3 1639 aa10.47□□□□□ -0.73
PACS1-211ENST00000531298 RIMBP3Q9UFD9 1639 aa10.47□□□□□ -0.73
PACS1-211ENST00000531298 KIF7Q2M1P5 1343 aa10.46□□□□□ -0.73
PACS1-211ENST00000531298 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
PACS1-211ENST00000531298 FRMPD1Q5SYB0 1578 aa10.46□□□□□ -0.74
PACS1-211ENST00000531298 KIF1BO60333 1816 aa10.46□□□□□ -0.74
PACS1-211ENST00000531298 MADDQ8WXG6 1647 aa10.45□□□□□ -0.74
PACS1-211ENST00000531298 FOXD4L1Q9NU39 408 aa10.45□□□□□ -0.74
PACS1-211ENST00000531298 CLTCL1P53675 1640 aa10.44□□□□□ -0.74
PACS1-211ENST00000531298 ABCA6Q8N139 1617 aa10.44□□□□□ -0.74
PACS1-211ENST00000531298 DIP2BQ9P265 1576 aa10.44□□□□□ -0.74
PACS1-211ENST00000531298 DCAF11Q8TEB1 546 aa10.44□□□□□ -0.74
PACS1-211ENST00000531298 CARD11Q9BXL7 1154 aa10.44□□□□□ -0.74
PACS1-211ENST00000531298 IFT172Q9UG01 1749 aa10.44□□□□□ -0.74
PACS1-211ENST00000531298 DIP2CQ9Y2E4 1556 aa10.43□□□□□ -0.74
PACS1-211ENST00000531298 AGLP35573 1532 aa10.43□□□□□ -0.74
PACS1-211ENST00000531298 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
PACS1-211ENST00000531298 KIF3BO15066 747 aa10.43□□□□□ -0.74
PACS1-211ENST00000531298 IQGAP1P46940 1657 aa10.43□□□□□ -0.74
PACS1-211ENST00000531298 PPRC1Q5VV67 1664 aaKnown RBP10.43□□□□□ -0.74
PACS1-211ENST00000531298 RPGRIP1LQ68CZ1 1315 aa10.42□□□□□ -0.74
PACS1-211ENST00000531298 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms