RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
CAPN1-221ENST00000531068 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
CAPN1-221ENST00000531068 C3P01024 1663 aa16.86■□□□□ 0.29
CAPN1-221ENST00000531068 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
CAPN1-221ENST00000531068 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
CAPN1-221ENST00000531068 FBXO41Q8TF61 875 aa16.85■□□□□ 0.29
CAPN1-221ENST00000531068 TNRQ92752 1358 aa16.85■□□□□ 0.29
CAPN1-221ENST00000531068 DUOX2Q9NRD8 1548 aa16.85■□□□□ 0.29
CAPN1-221ENST00000531068 MROH2AA6NES4 1674 aa16.85■□□□□ 0.29
CAPN1-221ENST00000531068 PKD2Q13563 968 aa16.84■□□□□ 0.29
CAPN1-221ENST00000531068 KDM5DQ9BY66 1539 aa16.84■□□□□ 0.29
CAPN1-221ENST00000531068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
CAPN1-221ENST00000531068 PZPP20742 1482 aa16.82■□□□□ 0.28
CAPN1-221ENST00000531068 PTPRTO14522 1441 aa16.82■□□□□ 0.28
CAPN1-221ENST00000531068 NCOA1Q15788 1441 aa16.82■□□□□ 0.28
CAPN1-221ENST00000531068 ERBINQ96RT1 1412 aa16.82■□□□□ 0.28
CAPN1-221ENST00000531068 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
CAPN1-221ENST00000531068 KANK1Q14678 1352 aa16.81■□□□□ 0.28
CAPN1-221ENST00000531068 THEMISQ8N1K5 641 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-221ENST00000531068 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
CAPN1-221ENST00000531068 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
CAPN1-221ENST00000531068 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
CAPN1-221ENST00000531068 A2ML1A8K2U0 1454 aa16.78■□□□□ 0.28
CAPN1-221ENST00000531068 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
CAPN1-221ENST00000531068 PLA2R1Q13018 1463 aa16.76■□□□□ 0.27
CAPN1-221ENST00000531068 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
CAPN1-221ENST00000531068 ABCC3O15438 1527 aa16.75■□□□□ 0.27
CAPN1-221ENST00000531068 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
CAPN1-221ENST00000531068 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
CAPN1-221ENST00000531068 NLRP1Q9C000 1473 aa16.74■□□□□ 0.27
CAPN1-221ENST00000531068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
CAPN1-221ENST00000531068 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
CAPN1-221ENST00000531068 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
CAPN1-221ENST00000531068 ARHGAP31Q2M1Z3 1444 aa16.73■□□□□ 0.27
CAPN1-221ENST00000531068 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-221ENST00000531068 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
CAPN1-221ENST00000531068 ITGAEP38570 1179 aa16.72■□□□□ 0.27
CAPN1-221ENST00000531068 ROCK1Q13464 1354 aa16.71■□□□□ 0.27
CAPN1-221ENST00000531068 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
CAPN1-221ENST00000531068 STRCQ7RTU9 1775 aa16.69■□□□□ 0.26
CAPN1-221ENST00000531068 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
CAPN1-221ENST00000531068 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
CAPN1-221ENST00000531068 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
CAPN1-221ENST00000531068 PRDM15P57071 1507 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-221ENST00000531068 CROCC2H7BZ55 1655 aa16.66■□□□□ 0.26
CAPN1-221ENST00000531068 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
CAPN1-221ENST00000531068 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
CAPN1-221ENST00000531068 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
CAPN1-221ENST00000531068 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
CAPN1-221ENST00000531068 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-221ENST00000531068 IDI1Q13907 227 aa16.64■□□□□ 0.25
CAPN1-221ENST00000531068 EID1Q9Y6B2 187 aa16.64■□□□□ 0.25
CAPN1-221ENST00000531068 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-221ENST00000531068 LMTK2Q8IWU2 1503 aa16.64■□□□□ 0.25
CAPN1-221ENST00000531068 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
CAPN1-221ENST00000531068 NPHP4O75161 1426 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-221ENST00000531068 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
CAPN1-221ENST00000531068 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
CAPN1-221ENST00000531068 NUP155O75694 1391 aa16.59■□□□□ 0.25
CAPN1-221ENST00000531068 DEPDC5O75140 1603 aa16.59■□□□□ 0.25
CAPN1-221ENST00000531068 HDGFP51858 240 aaKnown RBP16.58■□□□□ 0.24
CAPN1-221ENST00000531068 MED14O60244 1454 aa16.58■□□□□ 0.24
CAPN1-221ENST00000531068 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
CAPN1-221ENST00000531068 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
CAPN1-221ENST00000531068 NOS1P29475 1434 aa16.57■□□□□ 0.24
CAPN1-221ENST00000531068 LTKP29376 864 aa16.57■□□□□ 0.24
CAPN1-221ENST00000531068 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
CAPN1-221ENST00000531068 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
CAPN1-221ENST00000531068 CEP152O94986 1710 aa16.53■□□□□ 0.24
CAPN1-221ENST00000531068 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
CAPN1-221ENST00000531068 EFCAB6Q5THR3 1501 aa16.53■□□□□ 0.24
CAPN1-221ENST00000531068 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
CAPN1-221ENST00000531068 ARHGAP23Q9P227 1491 aa16.52■□□□□ 0.23
CAPN1-221ENST00000531068 SLIT1O75093 1534 aa16.5■□□□□ 0.23
CAPN1-221ENST00000531068 TOM1O60784 492 aa16.5■□□□□ 0.23
CAPN1-221ENST00000531068 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
CAPN1-221ENST00000531068 BCANQ96GW7 911 aa16.5■□□□□ 0.23
CAPN1-221ENST00000531068 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
CAPN1-221ENST00000531068 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
CAPN1-221ENST00000531068 CPS1P31327 1500 aa16.49■□□□□ 0.23
CAPN1-221ENST00000531068 PPP1R15AO75807 674 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-221ENST00000531068 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
CAPN1-221ENST00000531068 NAIPQ13075 1403 aa16.47■□□□□ 0.23
CAPN1-221ENST00000531068 UNC13BO14795 1591 aa16.46■□□□□ 0.23
CAPN1-221ENST00000531068 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
CAPN1-221ENST00000531068 HFM1A2PYH4 1435 aa16.45■□□□□ 0.22
CAPN1-221ENST00000531068 SYNMO15061 1565 aa16.44■□□□□ 0.22
CAPN1-221ENST00000531068 KCNA6P17658 529 aa16.44■□□□□ 0.22
CAPN1-221ENST00000531068 UBR1Q8IWV7 1749 aa16.44■□□□□ 0.22
CAPN1-221ENST00000531068 TET3O43151 1660 aa16.43■□□□□ 0.22
CAPN1-221ENST00000531068 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
CAPN1-221ENST00000531068 PIK3C2BO00750 1634 aa16.42■□□□□ 0.22
CAPN1-221ENST00000531068 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
CAPN1-221ENST00000531068 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-221ENST00000531068 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
CAPN1-221ENST00000531068 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
CAPN1-221ENST00000531068 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
CAPN1-221ENST00000531068 RIMS2Q9UQ26 1411 aa16.41■□□□□ 0.22
CAPN1-221ENST00000531068 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
CAPN1-221ENST00000531068 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms